EWM29057.1, cds1611 (CDS) Nannochloropsis gaditana

Overview
NameEWM29057.1
Unique Namecds1611
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1066863..1066978 +
Alignment locationCM002457.1:1067045..1067230 +
Alignment locationCM002457.1:1067275..1067461 +

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Properties
Property NameValue
Protein idEWM29057.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100024g19.4315.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1066863..1066978 +
CM002457.1supercontigCM002457.1:1067045..1067230 +
CM002457.1supercontigCM002457.1:1067275..1067461 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29057.1 vs. NCBI_GenBank
Match: gi|585111576|gb|EWM29057.1| (hypothetical protein Naga_100024g19 [Nannochloropsis gaditana])

HSP 1 Score: 333.183 bits (853), Expect = 1.220e-115
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:    1 MSRGHTLSFQTSSKINSCSRDVILSWAINASTMNSPSWLHVDDPTSCKVKTRRLLTNSSASRTDRRAEIVTGVSCSCIGKLVPIVAWTVPPDLLLLSLCDSRRGQELRGQLRGKFFDHNHSLFEAVLNVRKMKKKKMGKKNMGHVAFGIRSVTGDFRPGLWQ 162
            MSRGHTLSFQTSSKINSCSRDVILSWAINASTMNSPSWLHVDDPTSCKVKTRRLLTNSSASRTDRRAEIVTGVSCSCIGKLVPIVAWTVPPDLLLLSLCDSRRGQELRGQLRGKFFDHNHSLFEAVLNVRKMKKKKMGKKNMGHVAFGIRSVTGDFRPGLWQ
Sbjct:    1 MSRGHTLSFQTSSKINSCSRDVILSWAINASTMNSPSWLHVDDPTSCKVKTRRLLTNSSASRTDRRAEIVTGVSCSCIGKLVPIVAWTVPPDLLLLSLCDSRRGQELRGQLRGKFFDHNHSLFEAVLNVRKMKKKKMGKKNMGHVAFGIRSVTGDFRPGLWQ 162
The following BLAST results are available for this feature:
BLAST of EWM29057.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111576|gb|EWM29057.1|1.220e-115100.00hypothetical protein Naga_100024g19 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1615rna1615Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications