EWM29056.1, cds1609 (CDS) Nannochloropsis gaditana

Overview
NameEWM29056.1
Unique Namecds1609
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1063849..1064103 -
Alignment locationCM002457.1:1062904..1063617 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29056.1
ProductMitochondrial carrier protein
Orig transcript idgnl|cribi|Naga_100024g22.4314.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1063849..1064103 -
CM002457.1supercontigCM002457.1:1062904..1063617 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0042221response to chemical
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
IPR002067Mit_carrier
Homology
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|585111575|gb|EWM29056.1| (Mitochondrial carrier protein [Nannochloropsis gaditana])

HSP 1 Score: 660.603 bits (1703), Expect = 0.000e+0
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query:    1 MAEDTSSTPLDMSFLDAVPHTYRLLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGSPRNETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPHFLESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV 322
            MAEDTSSTPLDMSFLDAVPHTYRLLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGSPRNETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPHFLESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV
Sbjct:    1 MAEDTSSTPLDMSFLDAVPHTYRLLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGSPRNETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPHFLESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV 322          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|224000219|ref|XP_002289782.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220974990|gb|EED93319.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 278.1 bits (710), Expect = 4.644e-89
Identity = 152/316 (48.10%), Postives = 200/316 (63.29%), Query Frame = 0
Query:   23 RLLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVG-GRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGS------------PRNETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYK--YPSRDV-TEASEEEPHFLESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV 322
            + L  GG+AG VAKT+TAPLSRLTIL+QV+  +     RP++A  +   L K+++  G L+ WKGNGTSVLHRFP++ INFY YE   + L   S            PR  + F+RL+AGA AG  AC ACYPLDL+RTRLT Q +G    Y+ I  AF KI  SEG+ GLY G+  TLMVAVP+ +ISY +YG++KE     +  Y  R V T   EE+  F  +L+CGA SGI S+L+T+P D +RRR+QI  LH     P E +     ++ + K +G +G YRG+ PE+LKV PMV   FT YE++KD L V
Sbjct:    2 KQLFCGGMAGSVAKTVTAPLSRLTILYQVHPMVTTKETRPKFAMSIRGGLEKIIQRGGMLSLWKGNGTSVLHRFPFSAINFYCYEGMLDILNGPSRLSDEDEDDMNNPREVSTFSRLVAGAVAGSTACVACYPLDLVRTRLTTQLDGQ-EHYKGITDAFVKIVRSEGVLGLYSGIAPTLMVAVPSFSISYMVYGSLKEYALEDELFYNLRKVDTVTGEEKLGFQLTLMCGAASGILSTLVTFPFDTVRRRMQIQSLH---FAPHEQISGVQMMRRLFKSDGLKGFYRGITPEVLKVIPMVSTMFTVYEMLKDKLNV 313          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|669143240|ref|XP_008607182.1| (hypothetical protein SDRG_03329 [Saprolegnia diclina VS20] >gi|530740879|gb|EQC39121.1| hypothetical protein SDRG_03329 [Saprolegnia diclina VS20])

HSP 1 Score: 273.863 bits (699), Expect = 6.643e-87
Identity = 137/307 (44.63%), Postives = 195/307 (63.52%), Query Frame = 0
Query:   14 FLDAVPHTYRLLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGSPRNETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPHFLESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVL 320
             LD +     +L +GG+AG V KT TAPLSRLTILFQV+S +    + ++++ L  A  KV+R EG ++ WKGNG SV+HRFPY+ +NF++YE  K   G+ S ++       ++GA A   + S CYP+DLIRTRL  Q +   R YR I HAF +I A EG  GLYRGL TTL+V VPN+A+++ ++  +KE+   Y+  S++   +       +++L+CG  SGI SS IT+P+DV+RRR+QI G+H G    G  +      + +   +G RG YRGL PELLKV PMVG TF +++ +K  L
Sbjct:   45 LLDEIAKQATVLFAGGVAGSVGKTCTAPLSRLTILFQVHSMVSATHKGKFSDSLPQAFMKVVRNEGVVSLWKGNGASVVHRFPYSAVNFFTYELMKGSFGEASSQSGQMSISFLSGAIAAATSTSVCYPIDLIRTRLITQLDKDIR-YRGISHAFHRIRAEEGTRGLYRGLSTTLLVTVPNMAVNFTMFEALKEMALVYR-SSKNEDASVNTSLGVIDTLLCGGVSGIVSSSITFPVDVIRRRMQISGIHGG----GRAMSAMEITRALYAEQGVRGFYRGLAPELLKVIPMVGITFGSFDYIKQAL 345          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|698823281|ref|XP_009844669.1| (hypothetical protein H257_17546 [Aphanomyces astaci] >gi|574100222|gb|ETV65806.1| hypothetical protein H257_17546 [Aphanomyces astaci])

HSP 1 Score: 271.937 bits (694), Expect = 4.946e-86
Identity = 142/326 (43.56%), Postives = 202/326 (61.96%), Query Frame = 0
Query:    5 TSSTPLDMSFLD-AVPHTYRLLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGSPRNETP-FTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPHFLESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHR------PGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV 322
            T +T +D++ L   V     +L +GG+AG + KT TAPLSRLTIL+QV+S +    + +++  L  A  KV+R EG  A WKGNG SV+HRFPY+ +NF++YE  K+          +P  TR ++GA A   + + CYP+DLIRTRL  Q +   R YR I HAF +I A EG  GLYRGL  TL+V VPN+AI++ ++ ++K+ +   +       E +      L++L CGA SGI SS++T+P+DV+RRR+QI GLH G+ +         T   W   K + + +G RG YRGL PELLKV PMVG TF T++++K  L +
Sbjct:   44 TETTDVDITSLQYHVTKQASVLFAGGVAGSIGKTFTAPLSRLTILYQVHSMVTPTHKDKFSGSLSQAFMKVVRREGVFALWKGNGASVVHRFPYSAVNFFTYEWMKDAFDTRQSGITSPMLTRFVSGAVAAATSTTVCYPIDLIRTRLITQLDNNIR-YRGISHAFHRIRAEEGTRGLYRGLSATLLVTVPNMAINFTVFESLKDAVQALR-------EDATTPLSALDTLSCGALSGISSSIVTFPVDVVRRRMQISGLHHGSGKETAAEAAQATATAWGIAKELYQQQGVRGFYRGLTPELLKVIPMVGITFGTFDMLKQSLHI 361          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|673021316|ref|XP_008864619.1| (hypothetical protein H310_02771, partial [Aphanomyces invadans] >gi|574479550|gb|ETW06544.1| hypothetical protein H310_02771, partial [Aphanomyces invadans])

HSP 1 Score: 270.396 bits (690), Expect = 2.586e-85
Identity = 141/322 (43.79%), Postives = 203/322 (63.04%), Query Frame = 0
Query:    5 TSSTPLDMSFLD-AVPHTYRLLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGSPRNETP-FTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPHF--LESLVCGATSGICSSLITYPMDVLRRRLQILGLH--PGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVL 320
            T +T +D++ L   V     +L +GG+AG + KT TAPLSRLTIL+QV+S +    + +++  L  A  KV+R EG  A WKGNG SV+HRFPY+ +NF++YE  K++  +    N +P  TR ++GA A   + + CYP+DLIRTRL  Q +   R YR I HAF +I A EG  GLYRGL  TL+V VPN+AI++ ++ ++K+ +  ++    D T  +   P    +++L CGA SGI SS++T+P+DV+RRR+QI GLH    +     T   W   + +   +G  G YRGL PELLKV PMVG TF T++++K  L
Sbjct:   51 TETTDVDITSLHYQVTKQASVLLAGGVAGSIGKTFTAPLSRLTILYQVHSMVTPTHKDKFSGSLYQAFMKVVRREGVFALWKGNGASVVHRFPYSAVNFFTYEAMKDFF-EAQTENTSPMLTRFVSGALAAATSTTVCYPIDLIRTRLITQLDNNIR-YRGISHAFHRIRAEEGTRGLYRGLSATLLVTVPNMAINFTVFESLKDAVQAFR---EDPTTGNSSPPPLTAVDTLTCGAVSGISSSIVTFPVDVVRRRMQISGLHVTTTSTAAEATATAWGITRELYLQQGIWGFYRGLTPELLKVIPMVGITFGTFDMIKQHL 367          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|1214709071|gb|OWZ20287.1| (Mitochondrial Carrier (MC) protein [Phytophthora megakarya])

HSP 1 Score: 270.781 bits (691), Expect = 2.647e-85
Identity = 148/336 (44.05%), Postives = 205/336 (61.01%), Query Frame = 0
Query:    4 DTSSTPLDMSFLDAVPHTYR---LLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKE-YLGDGSP--RNETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYP---------SRDVTEASEEEPHF--LESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV 322
            +T    +D+   DAV    R   +L +GG+AG V KT+TAPLSRLTILFQV+S +      +++  +  A  KV++ EG LAFWKGNG SVLHRFPY+ +NF+++E  K   +    P  R+ +  T   +GA AG  A  ACYP+DLIRTRL  Q     R Y  I HA ++I+A EG+ GLYRG+G TLMV VPNLAI++ +Y ++KE    ++           +R+      +  H    ++L+CG T+GI SSL+T+P+DV+RRRLQI  +H  N   G    P      + + +G RG YRGL PEL+KV PMVG TF ++E +K +L V
Sbjct:   47 ETDDVDVDLVQQDAVKQLMRHGSVLFAGGVAGSVGKTVTAPLSRLTILFQVHSMVSTRHTDRFSPTVSSAFTKVLKNEGALAFWKGNGASVLHRFPYSAVNFFTFEMVKNGIIAQNHPAFRDNSWTTMFASGAIAGATATVACYPIDLIRTRLATQLNSDIR-YTGIRHAVQRISAEEGVLGLYRGMGATLMVTVPNLAINFTLYESLKEYARSFRRNQALAGLTGVAREQAAEMHDSTHLCVTDTLLCGGTAGIASSLVTFPIDVVRRRLQISAIHAEN--AGIKPTPSGIASELFRTQGVRGFYRGLTPELMKVVPMVGITFGSFERLKKLLAV 379          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|1173958835|gb|OQS05140.1| (Mitochondrial Carrier (MC) Family [Thraustotheca clavata])

HSP 1 Score: 266.544 bits (680), Expect = 5.121e-84
Identity = 141/322 (43.79%), Postives = 194/322 (60.25%), Query Frame = 0
Query:    4 DTSSTPLDMSFLDAVPHTYRLLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGSPRNETPFT-----RLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPH---FLESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMK 317
            +T+    D   LD +     +L +GGIAG V KT TAPLSRLTILFQV+S +    + +++  L  A  KV+R EG L+ WKGNG SV+HRFPY+ +NF++YE  K      +  N+   +       ++GA A   + S CYP+DLIRTRL  Q +   R YR I HAF +I A EG  GLYRGL  TL V VPN+AI++ ++ T+KE    ++      +E ++ E      L++L CG  SGI SS IT+P+DV+RRR+QI G+H G+      V      + +   +G RG YRGL PELLKV PMVG TF +++ +K
Sbjct:   35 ETADVDHDSRLLDEITKQASVLLAGGIAGSVGKTCTAPLSRLTILFQVHSMVSATHKGKFSESLPQAFMKVVRNEGILSLWKGNGASVVHRFPYSAVNFFTYELIKGSFASANLDNDVSQSAQMSMNFVSGAMAAATSTSVCYPIDLIRTRLITQLDKDIR-YRGISHAFHRIRAEEGTRGLYRGLSATLFVTVPNMAINFTMFETLKEKALAHR------SEQAQREIQTLTVLDTLFCGGLSGILSSSITFPVDVIRRRMQISGIHGGS----SNVTALAIARELFAEQGIRGFYRGLAPELLKVIPMVGITFGSFDYIK 345          

HSP 2 Score: 73.1738 bits (178), Expect = 5.765e-11
Identity = 54/197 (27.41%), Postives = 91/197 (46.19%), Query Frame = 0
Query:  126 LIAGACAGGVACSACYPLD----LIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPHFLESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKD 318
            L+AG  AG V  +   PL     L +    +     G+   S+  AF K+  +EG+  L++G G +++   P  A+++  Y  +K         + DV+++++   +F    V GA +   S+ + YP+D++R RL         +R     G  +    I   EG RGLYRGL   L    P +   FT +E +K+
Sbjct:   56 LLAGGIAGSVGKTCTAPLSRLTILFQVHSMVSATHKGKFSESLPQAFMKVVRNEGILSLWKGNGASVVHRFPYSAVNFFTYELIKGSFASANLDN-DVSQSAQMSMNF----VSGAMAAATSTSVCYPIDLIRTRLITQLDKDIRYR-----GISHAFHRIRAEEGTRGLYRGLSATLFVTVPNMAINFTMFETLKE 242          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|301094902|ref|XP_002896554.1| (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >gi|262108948|gb|EEY67000.1| Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4])

HSP 1 Score: 265.388 bits (677), Expect = 4.329e-83
Identity = 150/339 (44.25%), Postives = 205/339 (60.47%), Query Frame = 0
Query:    4 DTSSTPLDMSFLDAVPHTYR---LLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKEYLGDGSPRNETPF------TRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPS---------RDVTEASEEEPHF--LESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV 322
            +T    +++   DAV    R   +L +GG+AG V KT+TAPLSRLTILFQV+S +      +++  +  A  KV++ EG LAFWKGNG SVLHRFPY+ +NF+++E  K  +     +N   F      T  ++GA AG  A  ACYP+DLIRTRL  Q     R Y  I HA ++I+A EG+ GLYRG+G TLMVAVPNLA+++ +Y ++KE    ++            R+      +  H    ++LVCG T+GI SSL+T+P+DV+RRRLQI  +H  N   G    P      +L  +G RG YRGL PEL+KV PMVG TF T+E +K +L V
Sbjct:   52 ETDGVDVELVHQDAVKQLMRHGSVLFAGGVAGSVGKTVTAPLSRLTILFQVHSMVSTRHTDRFSPTVSSAFTKVLKNEGALAFWKGNGASVLHRFPYSAVNFFTFEMVKNGI---IAQNHPAFAYNSWTTMFVSGALAGATATVACYPIDLIRTRLATQLNTDIR-YTGIRHAVQRISAEEGVLGLYRGMGATLMVAVPNLAVNFTLYESLKEYARSFRRNQALSGLTGVEREQAAEMYDGAHLCVTDTLVCGGTAGIASSLLTFPIDVVRRRLQISAIHAEN--AGIKPTPSGIASELLHTQGIRGFYRGLTPELMKVVPMVGITFGTFERLKKMLTV 384          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|970638620|gb|KUF82043.1| (Mitochondrial Carrier (MC) Family [Phytophthora nicotianae] >gi|970639071|gb|KUF82320.1| Mitochondrial Carrier (MC) Family [Phytophthora nicotianae] >gi|970652390|gb|KUF91062.1| hypothetical protein AM588_10003771 [Phytophthora nicotianae])

HSP 1 Score: 265.003 bits (676), Expect = 5.862e-83
Identity = 145/336 (43.15%), Postives = 203/336 (60.42%), Query Frame = 0
Query:    4 DTSSTPLDMSFLDAVPHTYR---LLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKE-YLGDGSP--RNETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPS---------RDVTEASEEEPHF--LESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV 322
            +T    +++   D V    R   +L +GG+AG V KT+TAPLSRLTILFQV+S +      +++  +  A  KV++ EG LAFWKGNG SVLHRFPY+ +NF+++E  K   +    P   + +  T  ++GA AG  A  ACYP+DLIRTRL  Q     R Y  I HA ++I+A EG+ GLYRG+G TLMV VPNLA+++ +Y ++K+    ++            R+       + H    ++LVCG T+GI SSL+T+P+DV+RRRLQI  +H  N   G    P      + + +G RG YRGL PEL+KV PMVG TF T+E +K +L V
Sbjct:   52 ETDDVDVELVQKDTVKQLMRHGSVLFAGGVAGSVGKTVTAPLSRLTILFQVHSMVSTRHTDRFSPTVTSAFTKVLKNEGVLAFWKGNGASVLHRFPYSAVNFFTFEMVKNGIIAQNHPAFADNSWTTMFVSGALAGATATVACYPIDLIRTRLATQLNTDIR-YTGIRHAVQRISAEEGVMGLYRGMGATLMVTVPNLAVNFTLYESLKDYARSFRRNQALAGLTGVEREQAAEMYNDTHLCVTDTLVCGGTAGIASSLLTFPIDVVRRRLQISAIHAEN--AGIKPTPSGIASELFQTQGIRGFYRGLTPELMKVVPMVGITFGTFERLKKLLAV 384          
BLAST of EWM29056.1 vs. NCBI_GenBank
Match: gi|675186887|ref|XP_008902328.1| (hypothetical protein PPTG_09204 [Phytophthora parasitica INRA-310] >gi|568097608|gb|ETN12350.1| hypothetical protein PPTG_09204 [Phytophthora parasitica INRA-310])

HSP 1 Score: 264.618 bits (675), Expect = 7.683e-83
Identity = 145/339 (42.77%), Postives = 204/339 (60.18%), Query Frame = 0
Query:    1 MAEDTSSTPLDMSFLDAVPHTYR---LLASGGIAGCVAKTMTAPLSRLTILFQVNSALHVGGRPQYANGLLPALRKVMREEGFLAFWKGNGTSVLHRFPYAGINFYSYEKFKE-YLGDGSP--RNETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPS---------RDVTEASEEEPHF--LESLVCGATSGICSSLITYPMDVLRRRLQILGLHPGNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVLGV 322
            +  +T    +++   D V    R   +L +GG+AG V KT+TAPLSRLTILFQV+S +      +++  +  A  KV++ EG LAFWKGNG SVLHRFPY+ +NF+++E  K   +    P   + +  T  ++GA AG  A  ACYP+DLIRTRL  Q     R Y  I HA ++I+A EG+ GLYRG+G TLMV VPNLA+++ +Y ++K+    ++            R+       + H    ++LVCG T+GI SSL+T+P+DV+RRRLQI  +H  N   G    P      + + +G RG YRGL PEL+KV PMVG TF T+E +K +L V
Sbjct:   49 LCTETDDVDVELVQKDTVKQLMRHGSVLFAGGVAGSVGKTVTAPLSRLTILFQVHSMVSTRHTDRFSPTVTSAFTKVLKNEGVLAFWKGNGASVLHRFPYSAVNFFTFEMVKNGIIAQNHPAFADNSWTTMFVSGALAGATATVACYPIDLIRTRLATQLNTDIR-YTGIRHAVQRISAEEGVMGLYRGMGATLMVTVPNLAVNFTLYESLKDYARSFRRNQALAGLTGVEREQAAEMYNDTHLCVTDTLVCGGTAGIASSLLTFPIDVVRRRLQISAIHAEN--AGIKPTPSGIASELFQTQGIRGFYRGLTPELMKVVPMVGITFGTFERLKKLLAV 384          
The following BLAST results are available for this feature:
BLAST of EWM29056.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111575|gb|EWM29056.1|0.000e+0100.00Mitochondrial carrier protein [Nannochloropsis gad... [more]
gi|224000219|ref|XP_002289782.1|4.644e-8948.10predicted protein, partial [Thalassiosira pseudona... [more]
gi|669143240|ref|XP_008607182.1|6.643e-8744.63hypothetical protein SDRG_03329 [Saprolegnia dicli... [more]
gi|698823281|ref|XP_009844669.1|4.946e-8643.56hypothetical protein H257_17546 [Aphanomyces astac... [more]
gi|673021316|ref|XP_008864619.1|2.586e-8543.79hypothetical protein H310_02771, partial [Aphanomy... [more]
gi|1214709071|gb|OWZ20287.1|2.647e-8544.05Mitochondrial Carrier (MC) protein [Phytophthora m... [more]
gi|1173958835|gb|OQS05140.1|5.121e-8443.79Mitochondrial Carrier (MC) Family [Thraustotheca c... [more]
gi|301094902|ref|XP_002896554.1|4.329e-8344.25Mitochondrial Carrier (MC) Family [Phytophthora in... [more]
gi|970638620|gb|KUF82043.1|5.862e-8343.15Mitochondrial Carrier (MC) Family [Phytophthora ni... [more]
gi|675186887|ref|XP_008902328.1|7.683e-8342.77hypothetical protein PPTG_09204 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1613rna1613Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications