EWM29070.1, cds1603 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|585111589|gb|EWM29070.1| (transcription factor iws1 [Nannochloropsis gaditana]) HSP 1 Score: 1001.5 bits (2588), Expect = 0.000e+0 Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
Query: 1 MAASRLDYQNLFGSSDEESDGDEGEQQQQSTSTAAPKASSGSSTIKPSALGKSSDDSSSDEDSSEEDEHLSAKKRLQQKGVPLASSSDEESDNEEEGDVPRPAGKARTTGSEALRRATADFDDEEEEEEPRRPNVLPDLSSDGNSSSSGSESESSDDEGDSRRRKRGAEKRKHRLKTKGKRPSKGVDKGRDGRGKAGKQVRDRGQGADEDGGAAAGTGAASEPRRAARELTAVEQALASFKRNRIQKLPDAQVQEMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVTARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEMEGRQGPAEREGGEGGFIMSTTSRGVVIPIRTGFNFKKVALTFREEFDRGQGKEDEAMEVAEREPRDGSESRTNRVRKALKDMGRAGGKKLRHESVQHGN 501
MAASRLDYQNLFGSSDEESDGDEGEQQQQSTSTAAPKASSGSSTIKPSALGKSSDDSSSDEDSSEEDEHLSAKKRLQQKGVPLASSSDEESDNEEEGDVPRPAGKARTTGSEALRRATADFDDEEEEEEPRRPNVLPDLSSDGNSSSSGSESESSDDEGDSRRRKRGAEKRKHRLKTKGKRPSKGVDKGRDGRGKAGKQVRDRGQGADEDGGAAAGTGAASEPRRAARELTAVEQALASFKRNRIQKLPDAQVQEMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVTARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEMEGRQGPAEREGGEGGFIMSTTSRGVVIPIRTGFNFKKVALTFREEFDRGQGKEDEAMEVAEREPRDGSESRTNRVRKALKDMGRAGGKKLRHESVQHGN
Sbjct: 1 MAASRLDYQNLFGSSDEESDGDEGEQQQQSTSTAAPKASSGSSTIKPSALGKSSDDSSSDEDSSEEDEHLSAKKRLQQKGVPLASSSDEESDNEEEGDVPRPAGKARTTGSEALRRATADFDDEEEEEEPRRPNVLPDLSSDGNSSSSGSESESSDDEGDSRRRKRGAEKRKHRLKTKGKRPSKGVDKGRDGRGKAGKQVRDRGQGADEDGGAAAGTGAASEPRRAARELTAVEQALASFKRNRIQKLPDAQVQEMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVTARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEMEGRQGPAEREGGEGGFIMSTTSRGVVIPIRTGFNFKKVALTFREEFDRGQGKEDEAMEVAEREPRDGSESRTNRVRKALKDMGRAGGKKLRHESVQHGN 501
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|553194892|ref|XP_005856048.1| (iws1 family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293013|gb|EKU20314.1| iws1 family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 752.281 bits (1941), Expect = 0.000e+0 Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0
Query: 1 MAASRLDYQNLFGSSDEESDGDEGEQQQQSTSTAAPKASSGSSTIKPSALGKSSDDSSSDEDSSEEDEHLSAKKRLQQKGVPLASSSDEESDNEEEGDVPRPAGKARTTGSEALRRATADFDDEEEEEEPRRPNVLPDLSSDGNSSSSGSESESSDDEGDSRRRKRGAEKRKHRLKTKGKRPSKGVDKGRDGRGKAGKQVRDRGQGADEDGGAAAGTGAASEPRRAARELTAVEQALASFKRNRIQKLPDAQVQEMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVTARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEI 378
MAASRLDYQNLFGSSDEESDGDEGEQQQQSTSTAAPKASSGSSTIKPSALGKSSDDSSSDEDSSEEDEHLSAKKRLQQKGVPLASSSDEESDNEEEGDVPRPAGKARTTGSEALRRATADFDDEEEEEEPRRPNVLPDLSSDGNSSSSGSESESSDDEGDSRRRKRGAEKRKHRLKTKGKRPSKGVDKGRDGRGKAGKQVRDRGQGADEDGGAAAGTGAASEPRRAARELTAVEQALASFKRNRIQKLPDAQVQEMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVTARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEI
Sbjct: 6 MAASRLDYQNLFGSSDEESDGDEGEQQQQSTSTAAPKASSGSSTIKPSALGKSSDDSSSDEDSSEEDEHLSAKKRLQQKGVPLASSSDEESDNEEEGDVPRPAGKARTTGSEALRRATADFDDEEEEEEPRRPNVLPDLSSDGNSSSSGSESESSDDEGDSRRRKRGAEKRKHRLKTKGKRPSKGVDKGRDGRGKAGKQVRDRGQGADEDGGAAAGTGAASEPRRAARELTAVEQALASFKRNRIQKLPDAQVQEMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVTARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEI 383
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|669149960|ref|XP_008610542.1| (hypothetical protein SDRG_06539 [Saprolegnia diclina VS20] >gi|530737538|gb|EQC35780.1| hypothetical protein SDRG_06539 [Saprolegnia diclina VS20]) HSP 1 Score: 121.709 bits (304), Expect = 1.791e-26 Identity = 67/188 (35.64%), Postives = 103/188 (54.79%), Query Frame = 0
Query: 223 PRRAARELTAVEQALASFKRNRIQK---LPDAQVQEMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVTARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEMEGRQG 407
P R REL ++ + K R + L ++ +TQ L+ M+ A +D QA+ +HRPA +KLK + L ++R LQ L+D +LG+I+ W+QPL + +LP ++R+ M+D + LK SG G+V+ L KHP+ET ENK ++D WSR + K T S+ E E E R+
Sbjct: 143 PERQQRELDFFDETMKGLKSGRAKSKMSLSQQDMENITQELLYRMDKACSDDMQAMDEHRPALEKLKFVDNALTMMRKVQLQPMLLD-FDLLGIIKKWIQPLENGALPSLSLRSKMLDMCQRMPIYKEHLKRSGFGKVVMSLWKHPDETPENKELCRLMIDRWSRSVFSK-TLDYSKLGEYEAEKREA 328
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|813178940|ref|XP_012205939.1| (hypothetical protein SPRG_11599 [Saprolegnia parasitica CBS 223.65] >gi|641529096|gb|KDO23285.1| hypothetical protein SPRG_11599 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 119.013 bits (297), Expect = 1.411e-25 Identity = 67/188 (35.64%), Postives = 103/188 (54.79%), Query Frame = 0
Query: 223 PRRAARELTAVEQALASFKRNRIQK---LPDAQVQEMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVTARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEMEGRQG 407
P R REL ++ + K R + L ++ +TQ L+ M+ A +D QA+ +HRPA +KLK + L ++R LQ L+D +LG+I+ W+QPL + +LP ++R+ M+D + LK SG G+V+ L KHP+ET ENK ++D WSR + K T S+ E E E R+
Sbjct: 143 PERQQRELDFFDETMKGLKSGRAKSKMSLSQQDMENITQELLYRMDKAYSDDVQAIDEHRPALEKLKFVDNALTMMRKVQLQPMLLD-FDLLGIIKKWIQPLDNGALPSLSLRSKMLDMCQRMPIYKEHLKRSGFGKVVMSLWKHPDETPENKELCRLMIDRWSRSVFSK-TLDYSKLGEYEAEKREA 328
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|170577715|ref|XP_001894111.1| (IWS1 C-terminus family protein [Brugia malayi] >gi|671417280|emb|CDQ04693.1| Bm3332, isoform c [Brugia malayi]) HSP 1 Score: 115.546 bits (288), Expect = 4.931e-24 Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 0
Query: 260 LITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLV-TARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEME 403
LI M++AAK+DR + ++ RPA QK K L V +L L A++DNG ++ +I WL PLPDKSLP +RT ++ L +R+E LK+SG+GR + L KHP ET ENKA ++ +W+R I T +S T +E ++
Sbjct: 267 LIDAMKSAAKDDRHSNIERRPALQKRKMLPHVKAMLIKHDLMEAIIDNG-MMNVISEWLAPLPDKSLPALEIRTDLLKILQDFSRLEPGTLKQSGLGRAVMLLYKHPRETKENKALAARLISDWARPIFQLDTDFRSMTKDERIQ 410
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|734552486|gb|KHN79969.1| (IWS1-like protein [Toxocara canis]) HSP 1 Score: 111.309 bits (277), Expect = 1.129e-22 Identity = 61/150 (40.67%), Postives = 88/150 (58.67%), Query Frame = 0
Query: 255 EMTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLV-TARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEME 403
E + L M+ AAK+DR + ++ +PA QK K L V +L L A++DNG +L + WL PLPDKSLP +RT ++ L +R+E LK+SG+GR + L KHP+ET ENKA ++ W+R I T +S + EE M+
Sbjct: 221 EQIRMLTDAMKAAAKDDRHSNMERKPALQKRKMLRYVKAMLIKHDLMEAIIDNG-MLSAVSEWLAPLPDKSLPALEIRTDLLKILQDYSRLEQGTLKQSGLGRAVMLLYKHPKETKENKALAHSLISEWARPIFQLDTDFRSMSREERMQ 369
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|732869698|gb|KHJ87823.1| (IWS1 protein, partial [Oesophagostomum dentatum]) HSP 1 Score: 110.538 bits (275), Expect = 2.102e-22 Identity = 63/150 (42.00%), Postives = 91/150 (60.67%), Query Frame = 0
Query: 256 MTQHLITLMETAAKEDRQALLQHRPATQKLKRLTEV-LDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLV-TARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEME 403
H++T M+ AAKEDR + + +PA +K K L EV + LLR + L+ A++D G V+ + WL PLPDKSLP +RT ++ L R++ LK+SG+GR + L KHP ET ENKA +I+ WSR I T +S + EE ++
Sbjct: 243 FIAHMVTAMKNAAKEDRHSNTERKPALKKRKMLAEVKIMLLRVEMLE-AMIDGG-VMSAVSEWLAPLPDKSLPALEIRTELLKILQGFGRLDQGILKQSGLGRAVMLLYKHPRETKENKAMAAQIIREWSRPIFQLDTDFRSVSREERVQ 390
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|597848817|gb|EYB98307.1| (hypothetical protein Y032_0132g1708 [Ancylostoma ceylanicum]) HSP 1 Score: 110.153 bits (274), Expect = 4.279e-22 Identity = 60/147 (40.82%), Postives = 91/147 (61.90%), Query Frame = 0
Query: 259 HLITLMETAAKEDRQALLQHRPATQKLKRLTEV-LDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLV-TARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEEEME 403
H+++ M+TAAK+DR + + +PA +K K L++V + LLR L+ A++D G ++ + WL PLPDKSLP +RT ++ L R++ LK+SG+GR + L KHP ET ENKA I+ WSR I T +S + EE ++
Sbjct: 313 HMVSAMKTAAKDDRHSNTERKPALKKRKMLSDVKMMLLRMDMLE-AMIDGG-MMSAVSEWLAPLPDKSLPALEIRTELLKILQGFGRLDQGVLKQSGLGRAVMLLYKHPRETKENKAMAAHIIREWSRPIFQLDTDFRSVSREERVQ 457
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|919103818|ref|XP_013388241.1| (PREDICTED: protein IWS1 homolog [Lingula anatina]) HSP 1 Score: 110.153 bits (274), Expect = 8.194e-22 Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 0
Query: 260 LITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLV-TARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEE 400
LI M+TAA+EDR Q +PA +KL+ L EVL LR LQGA +D G +L + WL PLPDKSLP +R ++ L + LK SG+G+ + L KHP E EN + ++++ WSR I + K+ + EE
Sbjct: 609 LINQMKTAAEEDRALNNQSKPAIKKLRMLPEVLQQLRKSDLQGAFLDCG-ILPALTEWLAPLPDKSLPHLQIREGLLRILQGFPPISSEALKSSGLGKAVMYLYKHPREIRENHERAGKLINEWSRPIFNLTSNYKNLSKEE 749
BLAST of EWM29070.1 vs. NCBI_GenBank
Match: gi|1126219782|ref|XP_019644054.1| (PREDICTED: protein IWS1 homolog A-like [Branchiostoma belcheri]) HSP 1 Score: 109.383 bits (272), Expect = 9.611e-22 Identity = 60/142 (42.25%), Postives = 81/142 (57.04%), Query Frame = 0
Query: 260 LITLMETAAKEDRQALLQHRPATQKLKRLTEVLDLLRSKHLQGALVDNGQVLGLIRLWLQPLPDKSLPLYAVRTPMIDYLVT-ARVEVHRLKESGIGRVIQQLKKHPEETVENKAKLTEIVDNWSRLITGKGTTLKSRTSEE 400
LI M+ A EDR +PA +KLK L+ V+ LR K LQ A++D G +L +I WL PLPD+SLP +R M+ L LK SGIGR + L KHP+ET NK + ++++ WSR I G + KS + EE
Sbjct: 346 LINKMKAAVDEDRVLNQNRQPAVRKLKMLSSVMQTLRKKDLQEAILDCG-MLPVITDWLSPLPDRSLPHLHIREEMLKILQDFPPCSQESLKSSGIGRAVMYLYKHPKETRNNKERAGKLINEWSRPIFGLNSNFKSMSREE 486 The following BLAST results are available for this feature:
BLAST of EWM29070.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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