EWM29060.1, cds1598 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|585111579|gb|EWM29060.1| (hypothetical protein Naga_100024g35 [Nannochloropsis gaditana]) HSP 1 Score: 645.195 bits (1663), Expect = 0.000e+0 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
Query: 1 MYYGGMAILFLFLLPLVSAFSPPLSTARPRISTITKAVALPASDQSTLNKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGTKGRFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQWLVHLPESKKVGLRGWN 316
MYYGGMAILFLFLLPLVSAFSPPLSTARPRISTITKAVALPASDQSTLNKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGTKGRFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQWLVHLPESKKVGLRGWN
Sbjct: 1 MYYGGMAILFLFLLPLVSAFSPPLSTARPRISTITKAVALPASDQSTLNKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGTKGRFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQWLVHLPESKKVGLRGWN 316
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|873231001|emb|CEM09753.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 268.085 bits (684), Expect = 1.341e-85 Identity = 134/261 (51.34%), Postives = 183/261 (70.11%), Query Frame = 0
Query: 50 KSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKG-MKYVSVGGVGTK-GRFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQWLVHLPESK 308
KSP++I PAQ G+++DY +MI+ELN+RG+PAYAVDL R DWL++ S++T YW+G L+PS L FY+ A + V+ +P++++HLV HSIGGW+ RA+ E D ++ F SLTTLG+P+ PPPA + + DQTRGLL Y+ +PGAFH + Y SV G K G GGLE +AY SYL LCG+GD GDG++P+S A L GS+ + + + KHSGF+P+ GPSIKIPG+ WYGTP++VDQW+ L K
Sbjct: 24 KSPVLICPAQLGISEDYLDMISELNARGYPAYAVDLKRLDWLELIPSSLTLAYWQGKLEPSKVLQFYYRALRRSVTSVREAHPEQRMHLVGHSIGGWIVRAFLAEEYDDDERASLFTSLTTLGTPHNPPPA-DSPFAQFDQTRGLLTYIADNYPGAFHSDHINYNSVVGASVKGGLGEGGLEGLLAYASYLALCGEGDTTGDGVVPQSTALLPGSSTMVLEDVKHSGFVPSLGPSIKIPGFRWYGTPDVVDQWIELLERVK 283
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|299116927|emb|CBN75037.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 256.914 bits (655), Expect = 7.085e-81 Identity = 124/264 (46.97%), Postives = 179/264 (67.80%), Query Frame = 0
Query: 49 NKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLK-ITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGE-VADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGTKGRFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKI-PGYVWYGTPEIVDQWLVHLPESKK 309
K P++I PAQ V DY +M+ EL RG PAY DL+RF W+ + SA++ +Y +G L P+ TL FY++A +E +K +P + +H++ HSIGGWVARA+ E AD + N +SLTTLG+PN PP G+W ++DQTRGLL+ +N RFPGA +G++Y SV G +G+F G +E+ +AY+SYLPLCG G + GDGIIP VA LEGST V + +KHSGF+P G +I + ++WYG+ ++D W+ +L E+++
Sbjct: 30 EKCPVLICPAQLSVPGDYGQMVTELKERGFPAYCADLTRFGWITGLLPSALSPEYLKGELTPANTLKFYYEAIDRALEEIKERHPGQGVHVIGHSIGGWVARAWLAEGCADTDREN--VLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAHVEGVRYTSVAGTALEGKFPGSVEQMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPSSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDSWVGNLDEAEQ 291
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|922866733|gb|KOO33531.1| (alpha beta-hydrolase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 226.868 bits (577), Expect = 9.251e-67 Identity = 117/259 (45.17%), Postives = 162/259 (62.55%), Query Frame = 0
Query: 47 TLNKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAA-AAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGTKGRFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQWLVHL 304
+L++ P++I PAQFG AKDY E++ L +RGHP L+ DWL++ +A+T +YW+ L P L FYF+A A+ E + R IHLVAHSIGGW+ RAY G ++ + F SL TLG+P+ PPP EG +IDQTRGLL YV R+PGA+HK ++Y++VG +G L +A SYLPLCG AEGDGI P A LEG+ R ++A H F+P +G ++ G WYG+P +++QW+ L
Sbjct: 270 SLSRDPVLICPAQFGTAKDYSELVDALRARGHPVSVTPLAFTDWLRLVPAALTPEYWKCELAPETALPFYFEALDRAVDELASGPFAGRPIHLVAHSIGGWIVRAYLGALS--AEKRAAFASLVTLGTPHTPPP--EGFLRTIDQTRGLLRYVEERYPGAYHKELRYLTVGSRAVRGALKPELGALLATASYLPLCGDAFAEGDGITPIGCAHLEGAEQ-REVDAFHIAFVPGSG--TRLLGTPWYGSPTVIEQWVDFL 521
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|551672031|ref|XP_005838772.1| (hypothetical protein GUITHDRAFT_102401 [Guillardia theta CCMP2712] >gi|428182933|gb|EKX51792.1| hypothetical protein GUITHDRAFT_102401 [Guillardia theta CCMP2712]) HSP 1 Score: 206.838 bits (525), Expect = 1.275e-61 Identity = 117/280 (41.79%), Postives = 156/280 (55.71%), Query Frame = 0
Query: 49 NKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEY-PDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVS-VGGVGT--------------------KGRFGGGLEESIAYISYLPLCGKG-DAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIP-GYVWYGTPEIVDQWLVHL 304
N P+V+ PAQFG +DYE++ L RG Y LSR DWLKI S +T++++ +L+PS TL F++ A E+V+ +Y D ++ ++ HSIGGWVAR+Y EV E KR SL TLG+P+ PPP + I ++DQTRGLL Y+N FP F V+ V G GT K R LEE +A SY PL GK + EGDG+IP VA L V + H+ F+PT G S+++P Y WYGT VDQW+ L
Sbjct: 12 NLKPVVLCPAQFGTQRDYEDLQKTLLKRGFNLYPAPLSRLDWLKIVPSTLTKEFFTASLRPSKTLGFFYSALDRAFEQVEKDYGVDVEVAVLGHSIGGWVARSYIAEVLGEEKAKKRIRSLVTLGTPHNPPPK-DSIVSAVDQTRGLLSYINENFPNGFPLDASAVTCVAGKGTVTPRGLMDVISKVGEKLWDEKQRRSKLLEEIVALASYFPLSGKAFETEGDGLIPVEVAVLAECRSVIIENCNHAAFVPTPGKSLRLPETYEWYGTESAVDQWIQFL 290
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|544216497|ref|XP_005538393.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449018955|dbj|BAM82357.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 166.392 bits (420), Expect = 6.459e-46 Identity = 94/280 (33.57%), Postives = 147/280 (52.50%), Query Frame = 0
Query: 28 RPRISTITKAVALPASDQSTLNKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRK----IHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAF--HKGMKYVSVGGVGTKGR-FGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQW 300
+PR ++ +AVA P ++ P A DY E++ L + + V ++R+DW + + + YWRGTLKP +D+YF+ + ++ + + D ++L+ HS GGW+AR Y E A +D+ KR ++ TLG+PN PPAG DQTRG+L Y+ ++ H G++Y VG +GR + LEE IAY SY P+CG+G GDGI+P +F+ G+ + + +A+HS P P WYG+P + W
Sbjct: 36 QPRRTSAARAVA----------TQPCLVLPGLGNAASDYAELLGLLPA---GSLVVPVARYDWFRNARGLMLPAYWRGTLKPRQVMDWYFERLERTLLQLSYAFGDETGDWGVNLIGHSAGGWLARLYVSEFAS-DDLRKRVRTVVTLGTPNLAPPAG-----VFDQTRGILAYLETQYSWKHRQHSGVRYTCVGSKAVRGRLWSSNLEEMIAYASYWPVCGRGRVAGDGIVPACSSFMRGAQAILLADARHS---PLTDPK------NWYGSPHHFECW 287
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|302786620|ref|XP_002975081.1| (hypothetical protein SELMODRAFT_415087 [Selaginella moellendorffii] >gi|300157240|gb|EFJ23866.1| hypothetical protein SELMODRAFT_415087 [Selaginella moellendorffii]) HSP 1 Score: 155.221 bits (391), Expect = 1.906e-41 Identity = 101/303 (33.33%), Postives = 148/303 (48.84%), Query Frame = 0
Query: 32 STITKAVALPASDQSTLNKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFH--------KGMKYVSVGGVGTKGRFGGGLEESIAYIS----------------------YLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQWLVHL 304
S I +A P+++ + VI P DY + + L S+G P + +SR DWL+ + +YWRGTLKP LD+Y + I+ VK ++ K+ L+AHS GGW+AR + E +D++ L TLG+P+ PPP +G+ G DQTRGLL+YV + PGAFH K V GVG+ G L E+I Y +CG+GD GDG++P A L G+T++ HS P + P WYG+P+++D+W+ L
Sbjct: 12 SHIVGCLASPSNNGHLTQRQSTVILPGLGNNTGDYAPLSSALRSKGFPVKVLKVSRLDWLRNAAGLLDGNYWRGTLKPRPVLDWYLERIKVAIDAVKAKHGHDKVSLIAHSAGGWLARVFMLEFGT-DDISL----LLTLGTPHLPPP--KGVPGVFDQTRGLLDYVEEKCPGAFHAPQGATRSKSPDAVVAAGVGSVTT--GTLVETIVESDEEEIDDGEELTPSYEDRLIGQGYKQVCGRGDVWGDGVVPAMSAHLRGATNITFDGVYHS---PVGANDEERP---WYGSPKVLDEWIKFL 299
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|676380283|ref|XP_009033420.1| (hypothetical protein AURANDRAFT_61164 [Aureococcus anophagefferens] >gi|323456517|gb|EGB12384.1| hypothetical protein AURANDRAFT_61164 [Aureococcus anophagefferens]) HSP 1 Score: 160.614 bits (405), Expect = 2.497e-40 Identity = 111/301 (36.88%), Postives = 156/301 (51.83%), Query Frame = 0
Query: 29 PRISTITKAVALPASDQSTLNKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVD-LSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGT----------------KGRFGGGLEESIAYISYLPLCGKGD---AEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIP-GYVWYGTPEIVDQWLVHLPESK 308
PR++ + +A+ + + L + ++I PAQFG KDY++++++L RGHPA V LSRFDWL+I S T+ +W G L+P+ TL FYF+A V + L+ HSIGGWV RAY VA + L TLG+P+ PPP+ G + +IDQTRGLL Y+N P V G T R LE ++ SY L G GD +GDG+IP A L G + V++A H+ F+PTA SIK+P Y W+G+ D ++ L S
Sbjct: 2 PRLAAM---LAILLNSATALTRPRVIIAPAQFGTPKDYDKLVSDLLQRGHPAVEVAPLSRFDWLRIVPSVFTKAFWLGELRPAPTLRFYFEALDEAFADVG---DGEDVALLGHSIGGWVLRAY---VAARPGNGAKVRRLVTLGTPHNPPPS--GFFSAIDQTRGLLSYINANCPP---DPAVVTCVAGDATWTPTIFDLFQRRPWEEAQRRSPLLESLVSLPSYAVLAGSGDPFQIKGDGLIPVQTALLAGCPSI-VVDAHHADFVPTALESIKLPETYPWFGSDGADDDFVPTLSASN 287
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|302814577|ref|XP_002988972.1| (hypothetical protein SELMODRAFT_427572 [Selaginella moellendorffii] >gi|300143309|gb|EFJ10001.1| hypothetical protein SELMODRAFT_427572 [Selaginella moellendorffii]) HSP 1 Score: 151.754 bits (382), Expect = 3.978e-40 Identity = 99/306 (32.35%), Postives = 147/306 (48.04%), Query Frame = 0
Query: 32 STITKAVALPASDQSTLNKSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHK-GMKYVSVGGVGTKGRF----------GGGLEESIAYIS----------------------YLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQWLVHL 304
S I +A P+++ + VI P DY + + L S+G P + +SR DWL+ + +YWRGTLKP LD+Y + I+ VK ++ K+ L+AHS GGW+AR + E +D++ L TLG+P+ PPP +G+ G DQTRGLL+YV + PGAFH +KYV + G L E+I Y +CG+GD GDG++P A L G+T++ HS P + P WYG+P+++D+W+ L
Sbjct: 10 SHIVGCLASPSNNGHLTQRQSTVILPGLGNNTGDYAPLSSALRSKGFPVKVLKVSRLDWLRNAAGLLDGNYWRGTLKPRPVLDWYLERIKVSIDAVKAKHGHDKVSLIAHSAGGWLARVFMLEFGT-DDISL----LLTLGTPHLPPP--KGVPGVFDQTRGLLDYVEEKCPGAFHAPQVKYVCIASRHVPVSILSFMIVFFVTTGTLVETIVESDEEEIDDVEELTPSYEDRLIGQGYKQVCGRGDVWGDGVVPAMSAHLRGATNITFDGVYHS---PVGANDEERP---WYGSPKVLDEWIKFL 302
BLAST of EWM29060.1 vs. NCBI_GenBank
Match: gi|901795577|gb|KMZ58541.1| (alpha/beta-Hydrolases superfamily protein [Zostera marina]) HSP 1 Score: 145.976 bits (367), Expect = 4.014e-38 Identity = 94/265 (35.47%), Postives = 136/265 (51.32%), Query Frame = 0
Query: 52 PIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLKITKSAITQDYWRGTLKPSGTLDFYFDAAA-AIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFIS-LTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRF-PGAFHKGMKYVSVGGVGTKG-RFGGGLEES------IAYI--SYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKIPGYVWYGTPEIVDQWLVHL 304
P++I P +KDY ++ L S P+ V +SR DWL+ +YW+GTLKP LD+Y AIIE + + D+K+ L+ HS GGW+AR + E+ N +S L TLGSP+ P P G +DQTRGLL+YV P + +KY+ + G +G RF E+ +I Y +CG+ D GDG++PE A L+G+ ++ HS P P WYG+P +VD+W+ HL
Sbjct: 31 PVIILPGLGNNSKDYHGLVMTLQSYNIPSVVVKVSRIDWLRNAYGLADPNYWKGTLKPRPILDWYLKRVEDAIIESKQLQQGDQKLSLIGHSAGGWLARVFM------EEFNSSDVSLLLTLGSPHLPSPKDTS--GVLDQTRGLLDYVEKYCKPAVYSLDLKYICIAGRYIQGSRFDVKSTETGESTLRTWFIGQGYKQVCGRADVWGDGVVPEVSAHLKGALNITYDGIYHS---PVGSDDTGRP---WYGSPLVVDKWVHHL 281 The following BLAST results are available for this feature:
BLAST of EWM29060.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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