EWM29100.1, cds1583 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|585111619|gb|EWM29100.1| (hypothetical protein Naga_100024g49 [Nannochloropsis gaditana]) HSP 1 Score: 400.979 bits (1029), Expect = 1.638e-141 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query: 1 MVTLIVACICKYFKAMDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
MVTLIVACICKYFKAMDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV
Sbjct: 1 MVTLIVACICKYFKAMDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|553189989|ref|XP_005855113.1| (transmembrane protein 222 [Nannochloropsis gaditana CCMP526] >gi|553194895|ref|XP_005856049.1| transmembrane protein 222 [Nannochloropsis gaditana CCMP526] >gi|422293014|gb|EKU20315.1| transmembrane protein 222 [Nannochloropsis gaditana CCMP526] >gi|422293949|gb|EKU21249.1| transmembrane protein 222 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 370.933 bits (951), Expect = 6.993e-130 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 16 MDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
MDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV
Sbjct: 1 MDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 177
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|936717419|ref|XP_014236643.1| (PREDICTED: transmembrane protein 222 [Trichogramma pretiosum]) HSP 1 Score: 166.777 bits (421), Expect = 2.791e-49 Identity = 80/153 (52.29%), Postives = 103/153 (67.32%), Query Frame = 0
Query: 35 SIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQI--PRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI 185
++DP + +P C+VW+P+PVLT+ LPF+GHMGIA GV+ DFAGPY + +AFG PTRY QL +GR +D AV A+ Y R HNLLCDNCHSH A ALN Y WNMV L+LYML+ GK+VSF A +KT P ++++ I
Sbjct: 13 NVDPSRQRYPFCIVWTPIPVLTYLLPFIGHMGIANSGGVIRDFAGPYHVSEDNMAFGWPTRYWQLDYTKAKGRVQGWDSAVHEASEIYKGRMHNLLCDNCHSHVARALNLMSYDNLVNWNMVKLALYMLIFGKFVSFSAMVKTWAPFIVIVTI 165
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|383847261|ref|XP_003699273.1| (PREDICTED: transmembrane protein 222 [Megachile rotundata]) HSP 1 Score: 166.777 bits (421), Expect = 4.008e-49 Identity = 81/153 (52.94%), Postives = 103/153 (67.32%), Query Frame = 0
Query: 35 SIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQ--IPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI 185
+IDP++ FP C+VW+PLP+LT+FLPF+GHMGIAT GV+ DFAGPY + +AFG PT+Y QL +G +D AVA A+ Y R HNL CDNCHSH A +LN Y + WNMV L+ MLV GK+VSFL +KT P L++ I
Sbjct: 23 TIDPEKQRFPFCIVWTPLPILTYFLPFIGHMGIATSTGVIRDFAGPYHVSEDNMAFGKPTKYWQLNHAKAKGGVRGWDSAVAEASEIYKTRMHNLCCDNCHSHVATSLNLMCYDNSSSWNMVKLAFLMLVHGKYVSFLGFLKTWVPFFLLVAI 175
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|524881873|ref|XP_005097585.1| (PREDICTED: transmembrane protein 222-like [Aplysia californica]) HSP 1 Score: 166.777 bits (421), Expect = 4.505e-49 Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 0
Query: 22 GPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPR---GREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
G +++FE +DP FPHC+VW+P+P LTW PF+GHMGI T GV+ DFAGPY + +AFG P +Y QL + + G++ +D +VA A+ Y+HR HNL CDNCHSH A ALN YKG+ WNMV L M+V +++S +KT P +L++ + +T++ V
Sbjct: 20 GSNMNLFEGRG---VDPKSKRFPHCIVWTPIPCLTWLFPFIGHMGICTTSGVIRDFAGPYFVSEDDMAFGQPVKYWQLDVSKAINGKD-SWDRSVAKASEEYNHRMHNLCCDNCHSHVAMALNLMNYKGSSRWNMVNLCFLMMVHSRYISVCGFLKTWLPFLLMVGVIITVVLV 189
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|1191075471|ref|XP_020916621.1| (transmembrane protein 222-like isoform X1 [Exaiptasia pallida] >gi|1191075473|ref|XP_020916622.1| transmembrane protein 222-like isoform X2 [Exaiptasia pallida]) HSP 1 Score: 165.236 bits (417), Expect = 1.390e-48 Identity = 81/169 (47.93%), Postives = 111/169 (65.68%), Query Frame = 0
Query: 26 SMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPR--GREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
SM T++ P++DP ++ +P C+VW+P+P+LTW PF+GHMGIA GV+ DFAGPY + +AFG PTRY +L + +D AV+SA+ Y HR HNL CDNCHSH A ALN +Y + WNM L+LY LV GK+VSF +KT P ++L G+ ++ V
Sbjct: 14 SMEYTNSLPNVDPKRNRYPFCIVWTPIPLLTWIFPFIGHMGIAMSSGVIRDFAGPYYVSEDCMAFGNPTRYWRLNPAKVTSTSSSWDTAVSSASDEYKHRMHNLCCDNCHSHVAMALNLMQYDKSSSWNMFKLALYSLVFGKFVSFGGFLKTWLP-FVILCTGIALLVV 181
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|668448101|gb|KFB37806.1| (AGAP012042-PA-like protein [Anopheles sinensis]) HSP 1 Score: 164.851 bits (416), Expect = 2.709e-48 Identity = 79/161 (49.07%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 34 PSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPR--GREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI-GLTIIY 191
PSI+ +D +P+C+VW+P+PVLTWF PF+GHMGIA +GV+ DFAGPY + + FG PTRY++L G +DE+V A+ATY R HNL CDNCHSH AL +YK WNMVVL+ +M GK+V +KT P +++L+I GL +Y
Sbjct: 21 PSINFAEDKYPYCIVWTPIPVLTWFFPFIGHMGIAMSNGVIRDFAGPYYVSEDNMGFGRPTRYLRLHPSNAFGGSQNWDESVIKASATYGARMHNLFCDNCHSHVGMALALMRYKEYTNWNMVVLAFWMFFRGKYVGVRGFLKTWLPFIIILIICGLVAMY 181
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|675192767|ref|XP_008905268.1| (hypothetical protein PPTG_11831 [Phytophthora parasitica INRA-310] >gi|567961684|gb|ETK87221.1| hypothetical protein L915_08304 [Phytophthora parasitica] >gi|567990414|gb|ETL40644.1| hypothetical protein L916_08230 [Phytophthora parasitica] >gi|568050064|gb|ETM47025.1| hypothetical protein L914_08193 [Phytophthora parasitica] >gi|568094659|gb|ETN09435.1| hypothetical protein PPTG_11831 [Phytophthora parasitica INRA-310] >gi|570328054|gb|ETO76002.1| hypothetical protein F444_08529 [Phytophthora parasitica P1976] >gi|570951848|gb|ETP17105.1| hypothetical protein F441_08450 [Phytophthora parasitica CJ01A1] >gi|570985984|gb|ETP45124.1| hypothetical protein F442_08410 [Phytophthora parasitica P10297]) HSP 1 Score: 164.851 bits (416), Expect = 3.730e-48 Identity = 78/155 (50.32%), Postives = 97/155 (62.58%), Query Frame = 0
Query: 31 SASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI 185
S +DP FP C+VWSP+P+LTWFLPF+GHMG+A G+++DFAGPY+IGR AFG TRYIQ + ++DEAVA+ Y R HNL CDNCHSH A L Y G + WNMV L +M GK+VS A IK+ P VL +
Sbjct: 42 SKGAVVDPAVHRFPFCIVWSPIPILTWFLPFIGHMGLADSKGIIFDFAGPYTIGRDDFAFGSATRYIQCNVAPEDADKWDEAVAAGCNIYEKRMHNLCCDNCHSHVAVCLEHANYAGRKRWNMVELCFWMFFRGKYVSVAAFIKSWLPFAFVLAL 196
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|676470216|ref|XP_009058781.1| (hypothetical protein LOTGIDRAFT_164035 [Lottia gigantea] >gi|556101804|gb|ESO90456.1| hypothetical protein LOTGIDRAFT_164035 [Lottia gigantea]) HSP 1 Score: 163.696 bits (413), Expect = 4.023e-48 Identity = 78/161 (48.45%), Postives = 107/161 (66.46%), Query Frame = 0
Query: 35 SIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQL---QIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
I+ D+ +PHC+VW+P+P LTWFLPF+GHMGIAT+ G++ DF GPY + ++FG PT+Y QL ++ GRE+ +D+AV A+ Y R HNL CDNCHSH A ALN Y + WNMV L ML+ GK+ F +KT P ++++ + LTII V
Sbjct: 12 QIEHDRSRYPHCIVWTPIPCLTWFLPFIGHMGIATISGIIRDFGGPYYVAEDNMSFGIPTKYWQLDLFKVKGGREV-WDKAVYEASEEYKKRMHNLCCDNCHSHVAMALNLMHYGSSTSWNMVKLCFMMLIYGKFTGFCGFLKTWLPFLIMVGVVLTIILV 171
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|695407090|ref|XP_009524283.1| (hypothetical protein PHYSODRAFT_247488 [Phytophthora sojae] >gi|348681750|gb|EGZ21566.1| hypothetical protein PHYSODRAFT_247488 [Phytophthora sojae]) HSP 1 Score: 163.696 bits (413), Expect = 4.340e-48 Identity = 75/151 (49.67%), Postives = 98/151 (64.90%), Query Frame = 0
Query: 35 SIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI 185
+ID FP C+VWSP+P+LTWFLPF+GH+G+A GV++DFAGPY+IGR AFG PTRY+Q + ++DEAVA+ Y R HNL CDNCHSH A L Y G + WNMV L +M + GK+VS +K+ P + VL +
Sbjct: 10 TIDAAVHRFPFCIVWSPIPILTWFLPFIGHLGLADSKGVIFDFAGPYTIGRDDFAFGAPTRYLQCTVAPEDVAKWDEAVAAGCKIYEKRMHNLCCDNCHSHVAVCLEHADYAGRKRWNMVELCFWMFIRGKYVSVAGFVKSWLPFVFVLAV 160 The following BLAST results are available for this feature:
BLAST of EWM29100.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|