EWM29100.1, cds1583 (CDS) Nannochloropsis gaditana

Overview
NameEWM29100.1
Unique Namecds1583
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1003822..1003835 -
Alignment locationCM002457.1:1003152..1003716 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29100.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100024g49.4358.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1003822..1003835 -
CM002457.1supercontigCM002457.1:1003152..1003716 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR008496DUF778
Homology
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|585111619|gb|EWM29100.1| (hypothetical protein Naga_100024g49 [Nannochloropsis gaditana])

HSP 1 Score: 400.979 bits (1029), Expect = 1.638e-141
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query:    1 MVTLIVACICKYFKAMDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
            MVTLIVACICKYFKAMDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV
Sbjct:    1 MVTLIVACICKYFKAMDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|553189989|ref|XP_005855113.1| (transmembrane protein 222 [Nannochloropsis gaditana CCMP526] >gi|553194895|ref|XP_005856049.1| transmembrane protein 222 [Nannochloropsis gaditana CCMP526] >gi|422293014|gb|EKU20315.1| transmembrane protein 222 [Nannochloropsis gaditana CCMP526] >gi|422293949|gb|EKU21249.1| transmembrane protein 222 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 370.933 bits (951), Expect = 6.993e-130
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query:   16 MDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
            MDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV
Sbjct:    1 MDSRPAGPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 177          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|936717419|ref|XP_014236643.1| (PREDICTED: transmembrane protein 222 [Trichogramma pretiosum])

HSP 1 Score: 166.777 bits (421), Expect = 2.791e-49
Identity = 80/153 (52.29%), Postives = 103/153 (67.32%), Query Frame = 0
Query:   35 SIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQI--PRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI 185
            ++DP +  +P C+VW+P+PVLT+ LPF+GHMGIA   GV+ DFAGPY +    +AFG PTRY QL     +GR   +D AV  A+  Y  R HNLLCDNCHSH A ALN   Y     WNMV L+LYML+ GK+VSF A +KT  P ++++ I
Sbjct:   13 NVDPSRQRYPFCIVWTPIPVLTYLLPFIGHMGIANSGGVIRDFAGPYHVSEDNMAFGWPTRYWQLDYTKAKGRVQGWDSAVHEASEIYKGRMHNLLCDNCHSHVARALNLMSYDNLVNWNMVKLALYMLIFGKFVSFSAMVKTWAPFIVIVTI 165          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|383847261|ref|XP_003699273.1| (PREDICTED: transmembrane protein 222 [Megachile rotundata])

HSP 1 Score: 166.777 bits (421), Expect = 4.008e-49
Identity = 81/153 (52.94%), Postives = 103/153 (67.32%), Query Frame = 0
Query:   35 SIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQ--IPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI 185
            +IDP++  FP C+VW+PLP+LT+FLPF+GHMGIAT  GV+ DFAGPY +    +AFG PT+Y QL     +G    +D AVA A+  Y  R HNL CDNCHSH A +LN   Y  +  WNMV L+  MLV GK+VSFL  +KT  P  L++ I
Sbjct:   23 TIDPEKQRFPFCIVWTPLPILTYFLPFIGHMGIATSTGVIRDFAGPYHVSEDNMAFGKPTKYWQLNHAKAKGGVRGWDSAVAEASEIYKTRMHNLCCDNCHSHVATSLNLMCYDNSSSWNMVKLAFLMLVHGKYVSFLGFLKTWVPFFLLVAI 175          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|524881873|ref|XP_005097585.1| (PREDICTED: transmembrane protein 222-like [Aplysia californica])

HSP 1 Score: 166.777 bits (421), Expect = 4.505e-49
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 0
Query:   22 GPRISMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPR---GREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
            G  +++FE      +DP    FPHC+VW+P+P LTW  PF+GHMGI T  GV+ DFAGPY +    +AFG P +Y QL + +   G++  +D +VA A+  Y+HR HNL CDNCHSH A ALN   YKG+  WNMV L   M+V  +++S    +KT  P +L++ + +T++ V
Sbjct:   20 GSNMNLFEGRG---VDPKSKRFPHCIVWTPIPCLTWLFPFIGHMGICTTSGVIRDFAGPYFVSEDDMAFGQPVKYWQLDVSKAINGKD-SWDRSVAKASEEYNHRMHNLCCDNCHSHVAMALNLMNYKGSSRWNMVNLCFLMMVHSRYISVCGFLKTWLPFLLMVGVIITVVLV 189          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|1191075471|ref|XP_020916621.1| (transmembrane protein 222-like isoform X1 [Exaiptasia pallida] >gi|1191075473|ref|XP_020916622.1| transmembrane protein 222-like isoform X2 [Exaiptasia pallida])

HSP 1 Score: 165.236 bits (417), Expect = 1.390e-48
Identity = 81/169 (47.93%), Postives = 111/169 (65.68%), Query Frame = 0
Query:   26 SMFETSASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPR--GREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
            SM  T++ P++DP ++ +P C+VW+P+P+LTW  PF+GHMGIA   GV+ DFAGPY +    +AFG PTRY +L   +       +D AV+SA+  Y HR HNL CDNCHSH A ALN  +Y  +  WNM  L+LY LV GK+VSF   +KT  P  ++L  G+ ++ V
Sbjct:   14 SMEYTNSLPNVDPKRNRYPFCIVWTPIPLLTWIFPFIGHMGIAMSSGVIRDFAGPYYVSEDCMAFGNPTRYWRLNPAKVTSTSSSWDTAVSSASDEYKHRMHNLCCDNCHSHVAMALNLMQYDKSSSWNMFKLALYSLVFGKFVSFGGFLKTWLP-FVILCTGIALLVV 181          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|668448101|gb|KFB37806.1| (AGAP012042-PA-like protein [Anopheles sinensis])

HSP 1 Score: 164.851 bits (416), Expect = 2.709e-48
Identity = 79/161 (49.07%), Postives = 106/161 (65.84%), Query Frame = 0
Query:   34 PSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPR--GREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI-GLTIIY 191
            PSI+  +D +P+C+VW+P+PVLTWF PF+GHMGIA  +GV+ DFAGPY +    + FG PTRY++L      G    +DE+V  A+ATY  R HNL CDNCHSH   AL   +YK    WNMVVL+ +M   GK+V     +KT  P +++L+I GL  +Y
Sbjct:   21 PSINFAEDKYPYCIVWTPIPVLTWFFPFIGHMGIAMSNGVIRDFAGPYYVSEDNMGFGRPTRYLRLHPSNAFGGSQNWDESVIKASATYGARMHNLFCDNCHSHVGMALALMRYKEYTNWNMVVLAFWMFFRGKYVGVRGFLKTWLPFIIILIICGLVAMY 181          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|675192767|ref|XP_008905268.1| (hypothetical protein PPTG_11831 [Phytophthora parasitica INRA-310] >gi|567961684|gb|ETK87221.1| hypothetical protein L915_08304 [Phytophthora parasitica] >gi|567990414|gb|ETL40644.1| hypothetical protein L916_08230 [Phytophthora parasitica] >gi|568050064|gb|ETM47025.1| hypothetical protein L914_08193 [Phytophthora parasitica] >gi|568094659|gb|ETN09435.1| hypothetical protein PPTG_11831 [Phytophthora parasitica INRA-310] >gi|570328054|gb|ETO76002.1| hypothetical protein F444_08529 [Phytophthora parasitica P1976] >gi|570951848|gb|ETP17105.1| hypothetical protein F441_08450 [Phytophthora parasitica CJ01A1] >gi|570985984|gb|ETP45124.1| hypothetical protein F442_08410 [Phytophthora parasitica P10297])

HSP 1 Score: 164.851 bits (416), Expect = 3.730e-48
Identity = 78/155 (50.32%), Postives = 97/155 (62.58%), Query Frame = 0
Query:   31 SASPSIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI 185
            S    +DP    FP C+VWSP+P+LTWFLPF+GHMG+A   G+++DFAGPY+IGR   AFG  TRYIQ  +      ++DEAVA+    Y  R HNL CDNCHSH A  L    Y G + WNMV L  +M   GK+VS  A IK+  P   VL +
Sbjct:   42 SKGAVVDPAVHRFPFCIVWSPIPILTWFLPFIGHMGLADSKGIIFDFAGPYTIGRDDFAFGSATRYIQCNVAPEDADKWDEAVAAGCNIYEKRMHNLCCDNCHSHVAVCLEHANYAGRKRWNMVELCFWMFFRGKYVSVAAFIKSWLPFAFVLAL 196          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|676470216|ref|XP_009058781.1| (hypothetical protein LOTGIDRAFT_164035 [Lottia gigantea] >gi|556101804|gb|ESO90456.1| hypothetical protein LOTGIDRAFT_164035 [Lottia gigantea])

HSP 1 Score: 163.696 bits (413), Expect = 4.023e-48
Identity = 78/161 (48.45%), Postives = 107/161 (66.46%), Query Frame = 0
Query:   35 SIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQL---QIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVIGLTIIYV 192
             I+ D+  +PHC+VW+P+P LTWFLPF+GHMGIAT+ G++ DF GPY +    ++FG PT+Y QL   ++  GRE+ +D+AV  A+  Y  R HNL CDNCHSH A ALN   Y  +  WNMV L   ML+ GK+  F   +KT  P ++++ + LTII V
Sbjct:   12 QIEHDRSRYPHCIVWTPIPCLTWFLPFIGHMGIATISGIIRDFGGPYYVAEDNMSFGIPTKYWQLDLFKVKGGREV-WDKAVYEASEEYKKRMHNLCCDNCHSHVAMALNLMHYGSSTSWNMVKLCFMMLIYGKFTGFCGFLKTWLPFLIMVGVVLTIILV 171          
BLAST of EWM29100.1 vs. NCBI_GenBank
Match: gi|695407090|ref|XP_009524283.1| (hypothetical protein PHYSODRAFT_247488 [Phytophthora sojae] >gi|348681750|gb|EGZ21566.1| hypothetical protein PHYSODRAFT_247488 [Phytophthora sojae])

HSP 1 Score: 163.696 bits (413), Expect = 4.340e-48
Identity = 75/151 (49.67%), Postives = 98/151 (64.90%), Query Frame = 0
Query:   35 SIDPDQDLFPHCLVWSPLPVLTWFLPFVGHMGIATMDGVMWDFAGPYSIGRHKLAFGPPTRYIQLQIPRGREIEYDEAVASANATYSHRTHNLLCDNCHSHCAWALNTFKYKGARWWNMVVLSLYMLVMGKWVSFLAAIKTLGPAMLVLVI 185
            +ID     FP C+VWSP+P+LTWFLPF+GH+G+A   GV++DFAGPY+IGR   AFG PTRY+Q  +      ++DEAVA+    Y  R HNL CDNCHSH A  L    Y G + WNMV L  +M + GK+VS    +K+  P + VL +
Sbjct:   10 TIDAAVHRFPFCIVWSPIPILTWFLPFIGHLGLADSKGVIFDFAGPYTIGRDDFAFGAPTRYLQCTVAPEDVAKWDEAVAAGCKIYEKRMHNLCCDNCHSHVAVCLEHADYAGRKRWNMVELCFWMFIRGKYVSVAGFVKSWLPFVFVLAV 160          
The following BLAST results are available for this feature:
BLAST of EWM29100.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111619|gb|EWM29100.1|1.638e-141100.00hypothetical protein Naga_100024g49 [Nannochlorops... [more]
gi|553189989|ref|XP_005855113.1|6.993e-130100.00transmembrane protein 222 [Nannochloropsis gaditan... [more]
gi|936717419|ref|XP_014236643.1|2.791e-4952.29PREDICTED: transmembrane protein 222 [Trichogramma... [more]
gi|383847261|ref|XP_003699273.1|4.008e-4952.94PREDICTED: transmembrane protein 222 [Megachile ro... [more]
gi|524881873|ref|XP_005097585.1|4.505e-4944.83PREDICTED: transmembrane protein 222-like [Aplysia... [more]
gi|1191075471|ref|XP_020916621.1|1.390e-4847.93transmembrane protein 222-like isoform X1 [Exaipta... [more]
gi|668448101|gb|KFB37806.1|2.709e-4849.07AGAP012042-PA-like protein [Anopheles sinensis][more]
gi|675192767|ref|XP_008905268.1|3.730e-4850.32hypothetical protein PPTG_11831 [Phytophthora para... [more]
gi|676470216|ref|XP_009058781.1|4.023e-4848.45hypothetical protein LOTGIDRAFT_164035 [Lottia gig... [more]
gi|695407090|ref|XP_009524283.1|4.340e-4849.67hypothetical protein PHYSODRAFT_247488 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1587rna1587Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications