EWM29051.1, cds1582 (CDS) Nannochloropsis gaditana

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|585111570|gb|EWM29051.1| (dna-directed rna polymerases ii 24 kda [Nannochloropsis gaditana])

HSP 1 Score: 445.662 bits (1145), Expect = 2.048e-158
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0

Query:    1 MNADVQNQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            MNADVQNQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV
Sbjct:    1 MNADVQNQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|298712690|emb|CBJ48715.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 204.527 bits (519), Expect = 3.720e-63
Identity = 105/212 (49.53%), Postives = 149/212 (70.28%), Query Frame = 0

Query:    7 NQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQP-GAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            + E  +++RIR+T +KML KRGYNVL++ +  T  +F   + +   E N    R   T+ V K+DD  D +FVFF DDEK +G KPI+ Y E++L+      II+ +  IT  A+  +Q   A   V++E FK++EL++DITEHTLVPEH VL+ +QKAE+L RYKLK++QLP+IQS DP+AR++G+Q+G V KI R SETAGRY+TYR+C+
Sbjct:    9 SDEGHKIYRIRQTCMKMLEKRGYNVLQEHVSMTSEAF---LQQYGPEPN----RHDLTLLVEKVDDPMDQIFVFFPDDEK-VGVKPIRSYSEKMLEEEVKRAIIVIKGGITPFARSAIQELCAQREVQVEDFKDAELMLDITEHTLVPEHQVLSSEQKAELLKRYKLKDTQLPRIQSTDPVARFFGMQKGQVCKITRPSETAGRYVTYRLCI 212          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|669150520|ref|XP_008610822.1| (DNA-directed RNA polymerase I, II, and III subunit RPABC1 [Saprolegnia diclina VS20] >gi|813141898|ref|XP_012199112.1| hypothetical protein SPRG_05117 [Saprolegnia parasitica CBS 223.65] >gi|530737818|gb|EQC36060.1| DNA-directed RNA polymerase I, II, and III subunit RPABC1 [Saprolegnia diclina VS20] >gi|641536031|gb|KDO29927.1| hypothetical protein SPRG_05117 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 202.601 bits (514), Expect = 1.507e-62
Identity = 113/217 (52.07%), Postives = 145/217 (66.82%), Query Frame = 0

Query:    1 MNADVQNQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            M+A V N E  RL+R+RKTV+KML  RGY V +  L+ T   F+        EN     RE  TI V K+DD +D +FVF+ DD K +G KPI+ Y  R+     +  I+I ++ IT  AK+ L   A P  K++ FKE+ELLVDITEHTLVP H VLT ++K  +L RYKLK+SQLP++Q +DPIARYYG+ RG VVKIIR SETAGRY+TYR  +
Sbjct:    1 MSALVLNPEASRLYRVRKTVVKMLANRGYIVSDDELKRTTDGFAAQFG----EN---PTREMMTILVEKVDDPSDNLFVFYPDDAK-VGVKPIRTYCNRMKDENVTKAILIVQDGITPFAKQALNEMA-PRYKIDHFKETELLVDITEHTLVPVHKVLTREEKIALLKRYKLKDSQLPRMQVSDPIARYYGMTRGQVVKIIRPSETAGRYVTYRAVM 208          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|1183457076|gb|ORY81129.1| (RPB5 subunit of DNA-directed RNA polymerase [Neocallimastix californiae])

HSP 1 Score: 201.445 bits (511), Expect = 4.293e-62
Identity = 105/214 (49.07%), Postives = 144/214 (67.29%), Query Frame = 0

Query:    4 DVQNQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            D + +E+ +L+R  KT+ +M+  RGY V +  L+ T   F +  A+          RE+ T  V K DD AD + VFF  DE  +G KPI+KY ER+       GII+Y+ N+T  A+K++   A P   +E+F +SELLV+IT H+LVP+HVVLT D+K  +L RYKLKE QLP+IQ +DP+ARYYGL++G VVKI+R SETAGRYITYR+C+
Sbjct:    2 DAEAREVTKLYRAYKTIHEMVHDRGYLVSQNELDMTLQQFQEKYAQ-----TGVVERESLTFLVQKKDDPADSLLVFFPADE-TVGVKPIRKYTERMSSQEVLKGIIVYQKNLTPSAQKVITQMA-PKYLIEIFSDSELLVNITRHSLVPKHVVLTNDEKKMLLERYKLKELQLPRIQPSDPVARYYGLRKGQVVKILRSSETAGRYITYRLCI 208          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|219112619|ref|XP_002178061.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410946|gb|EEC50875.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 202.216 bits (513), Expect = 4.731e-62
Identity = 108/209 (51.67%), Postives = 142/209 (67.94%), Query Frame = 0

Query:    9 ELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            E  RLFR+ +T+  ML KRGY V +   E T S+F +             +RE  TI V K DD  + +F+FF +DEK +G KPI+ Y +R+     S  III R +IT  AK+ +Q  +    ++E FKESELLVDIT+H LVP H VLTP++K E+L RY+LK+SQLP+IQS DP+ARYYG++RG VVKIIR SETAGRY+TYR+C+
Sbjct:   29 EAARLFRVYRTIANMLDKRGYMVPKTLREITPSAFKERFG-------EYPSRENLTILVEKADDDTNQLFIFFPEDEK-VGVKPIKVYTDRMRAESVSNAIIILRVDITPFAKQAVQEMS-DSFRIEHFKESELLVDITKHQLVPVHQVLTPNEKNELLKRYRLKDSQLPRIQSNDPVARYYGMRRGQVVKIIRPSETAGRYVTYRICM 228          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|1183316727|gb|ORX46595.1| (hypothetical protein BCR36DRAFT_585066 [Piromyces finnis])

HSP 1 Score: 201.445 bits (511), Expect = 4.946e-62
Identity = 105/214 (49.07%), Postives = 144/214 (67.29%), Query Frame = 0

Query:    4 DVQNQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            D + +E+ +L+R  KT+ +M+  RGY V +  L+ T S F D  A     +     RE+ T  V K DD AD + VFF  DE  +G KPI+KY ER+       GII+Y+ N+T  A+K++   A P   +E+F +SELLV+IT H+LVP+HVVLT ++K  +L RYKLK+ QLP+IQ  DP+ARYYGL++G VVKI+R SETAGRYITYR+C+
Sbjct:    2 DSEAREITKLYRAYKTIHEMVHDRGYLVSQNELDMTLSQFKDKYA-----SAGSVERESLTFLVQKKDDPADSLLVFFPADE-SVGVKPIRKYTERMSSQEVLKGIIVYQKNLTPSAQKVITQMA-PKYLIEIFSDSELLVNITRHSLVPKHVVLTNEEKKMLLERYKLKDLQLPRIQPTDPVARYYGLRKGQVVKILRSSETAGRYITYRLCI 208          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|1173960435|gb|OQS06564.1| (DNA-directed RNA polymerase I, II, and III subunit RPABC1 [Thraustotheca clavata])

HSP 1 Score: 201.445 bits (511), Expect = 5.000e-62
Identity = 110/211 (52.13%), Postives = 142/211 (67.30%), Query Frame = 0

Query:    7 NQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            N E  RL+R+RKTV+KML  RGY V ++ L  T   F         EN    +RE  TI V K+DD +D +FVF+ DD K +G KPI+ Y  R+     +  I+I ++ IT  AK+ L   A P  K++ FKE+ELLVDITEHTLVP H VLT ++K  +L RYKLK+SQLP++Q++DPIARYYG+ RG VVKIIR SETAGRY+TYR  +
Sbjct:    7 NPEASRLYRVRKTVVKMLHNRGYIVSDEELRRTTDEFVQQFG----EN---PSRENLTILVEKVDDPSDNLFVFYPDDAK-VGVKPIRNYCNRMKDENVTKAILIVQDGITPFAKQALNEMA-PKFKIDHFKETELLVDITEHTLVPVHKVLTREEKIALLKRYKLKDSQLPRMQASDPIARYYGMTRGQVVKIIRPSETAGRYVTYRAVM 208          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|1183427416|gb|ORY51713.1| (RPB5 subunit of DNA-directed RNA polymerase [Neocallimastix californiae])

HSP 1 Score: 200.675 bits (509), Expect = 7.904e-62
Identity = 106/217 (48.85%), Postives = 146/217 (67.28%), Query Frame = 0

Query:    1 MNADVQNQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            M++D +  E+ +L+R  KT+ +M+  RGY V +  L+ T   F +  A+          RE+ T  V K DD AD + VFF  DE  +G KPI+KY ER+       GII+Y+ N+T  A+K++   A P   +E+F +SELLV+IT H+LVP+HVVLT D+K  +L RYKLKE QLP+IQ +DP+ARYYGL++G VVKI+R SETAGRYITYR+C+
Sbjct:    1 MDSDAR--EVTKLYRAYKTIHEMVHDRGYLVSQNELDMTLQQFQEKYAQ-----TGVVERESLTFLVQKKDDPADSLLVFFPSDE-TVGVKPIRKYTERMSSQEVLKGIIVYQKNLTPSAQKVITQMA-PKYLIEIFSDSELLVNITRHSLVPKHVVLTNDEKKMLLERYKLKELQLPRIQPSDPVARYYGLRKGQVVKILRSSETAGRYITYRLCI 208          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|1183346685|gb|ORX75465.1| (RPB5 subunit of DNA-directed RNA polymerase [Anaeromyces robustus])

HSP 1 Score: 200.29 bits (508), Expect = 1.263e-61
Identity = 105/214 (49.07%), Postives = 144/214 (67.29%), Query Frame = 0

Query:    4 DVQNQELMRLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            D + +E+ +L+R  KT+ +M+  RGY V +  L+ T   F D  A      +    RE+ T  V K DD AD + VFF  DE  +G KPI+KY ER+       GII+Y+ N+T  A+K++   A P   +E+F +SELLV+IT H+LVP+HVVLT ++K  +L RYKLKE QLP+IQ +DP+ARYYGL++G VVKI+R SETAGRYITYR+C+
Sbjct:    2 DSEAREVTKLYRAYKTIHEMVHDRGYLVSQTELDMTLQQFQDKYA-----PSGVVERESLTFLVQKKDDPADSLLVFFPADE-TVGVKPIRKYTERMSSQEVLKGIIVYQKNLTPSAQKVITQMA-PKYLIEIFSDSELLVNITRHSLVPKHVVLTNEEKKMLLERYKLKELQLPRIQPSDPVARYYGLRKGQVVKILRSSETAGRYITYRLCI 208          

BLAST of EWM29051.1 vs. NCBI_GenBank
Match: gi|1210520972|dbj|GAX20205.1| (DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Fistulifera solaris])

HSP 1 Score: 199.904 bits (507), Expect = 2.773e-61
Identity = 104/206 (50.49%), Postives = 140/206 (67.96%), Query Frame = 0

Query:   12 RLFRIRKTVLKMLTKRGYNVLEQTLEATFSSFSDDVARISLENNNCTAREACTINVGKIDDAADVVFVFFSDDEKGLGTKPIQKYVERLLQAGSSCGIIIYRNNITAIAKKLLQPGAIPGVKLEVFKESELLVDITEHTLVPEHVVLTPDQKAEVLGRYKLKESQLPKIQSADPIARYYGLQRGTVVKIIRLSETAGRYITYRVCV 217
            RLFR+ +T+  +L +RGY V  +  E T + F           N+   RE  T+ V K DD  D +FVFF +DEK +G KPI+ Y +R+   G S  I++ + +IT  AK+ +Q  +    ++E FKESELLVDIT+H LVP+H VLT  +KAE+L RY+LK++QLP+IQ  DPIARYYG++RG VVKIIR SETAGRY+TYRVC+
Sbjct:   28 RLFRVYRTMANLLEQRGYMVPRELREITPAQFQQKFG------NDSINRETLTLLVEKADDEHDQLFVFFPEDEK-VGVKPIKVYTDRMRAEGVSNAIMVLKVDITPFAKQAVQEMS-DSFRMEHFKESELLVDITQHQLVPQHQVLTAAEKAELLKRYRLKDTQLPRIQPNDPIARYYGMKRGQVVKIIRPSETAGRYVTYRVCM 225