EWM29066.1, cds1578 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29066.1 vs. NCBI_GenBank
Match: gi|585111585|gb|EWM29066.1| (hypothetical protein Naga_100024g55 [Nannochloropsis gaditana]) HSP 1 Score: 1097.42 bits (2837), Expect = 0.000e+0 Identity = 540/540 (100.00%), Postives = 540/540 (100.00%), Query Frame = 0
Query: 1 MSSSSVAAGVSCPVCGAQIGSPATCCKILKDWSNESKMLYYFEAVKSDECNVNPEVRRFWADAIVHYLADRKRSFVFNGEEIKLAYTRRSVLSTLCLPRILSELDTTKETCKLSSLTPCVGRVEAPLAARLWRTSWYLTEAGARFSAWTVRTLVVKPVRRAWSYAIGHDGDFDDDTEMREAEDEQIASLRASRVHVGLCEAAAELVTAYFLSRPDLERTVSLSEGGDEGAGDVQGDGGPGGQGGATAGMCSFLHVCRRAASSSPTPSASPASKILRTCSRVDGEVLATVMVRLKLAVQEGSYLKILGRGGGAGSLTAADKTVLDFRIRVNKIDRMLGAQEAQMVESKLRAAGLHSRGLSAQALVEWRRHKKLATSVEKLRGAMVNMLSIYHSIEGQHADMQVFAGLRGGNLALKQQKTAAKAMGLGGVEDVEEALREAQELIDESDELGKILSSPLMNREGPTEDIKEEELLKELEALAIAEAEGQRDVDIEKDATERRRSAKEAEAAVSYDLPDISHLSPIVGKTETVARSSSRVRVVK 540
MSSSSVAAGVSCPVCGAQIGSPATCCKILKDWSNESKMLYYFEAVKSDECNVNPEVRRFWADAIVHYLADRKRSFVFNGEEIKLAYTRRSVLSTLCLPRILSELDTTKETCKLSSLTPCVGRVEAPLAARLWRTSWYLTEAGARFSAWTVRTLVVKPVRRAWSYAIGHDGDFDDDTEMREAEDEQIASLRASRVHVGLCEAAAELVTAYFLSRPDLERTVSLSEGGDEGAGDVQGDGGPGGQGGATAGMCSFLHVCRRAASSSPTPSASPASKILRTCSRVDGEVLATVMVRLKLAVQEGSYLKILGRGGGAGSLTAADKTVLDFRIRVNKIDRMLGAQEAQMVESKLRAAGLHSRGLSAQALVEWRRHKKLATSVEKLRGAMVNMLSIYHSIEGQHADMQVFAGLRGGNLALKQQKTAAKAMGLGGVEDVEEALREAQELIDESDELGKILSSPLMNREGPTEDIKEEELLKELEALAIAEAEGQRDVDIEKDATERRRSAKEAEAAVSYDLPDISHLSPIVGKTETVARSSSRVRVVK
Sbjct: 1 MSSSSVAAGVSCPVCGAQIGSPATCCKILKDWSNESKMLYYFEAVKSDECNVNPEVRRFWADAIVHYLADRKRSFVFNGEEIKLAYTRRSVLSTLCLPRILSELDTTKETCKLSSLTPCVGRVEAPLAARLWRTSWYLTEAGARFSAWTVRTLVVKPVRRAWSYAIGHDGDFDDDTEMREAEDEQIASLRASRVHVGLCEAAAELVTAYFLSRPDLERTVSLSEGGDEGAGDVQGDGGPGGQGGATAGMCSFLHVCRRAASSSPTPSASPASKILRTCSRVDGEVLATVMVRLKLAVQEGSYLKILGRGGGAGSLTAADKTVLDFRIRVNKIDRMLGAQEAQMVESKLRAAGLHSRGLSAQALVEWRRHKKLATSVEKLRGAMVNMLSIYHSIEGQHADMQVFAGLRGGNLALKQQKTAAKAMGLGGVEDVEEALREAQELIDESDELGKILSSPLMNREGPTEDIKEEELLKELEALAIAEAEGQRDVDIEKDATERRRSAKEAEAAVSYDLPDISHLSPIVGKTETVARSSSRVRVVK 540
BLAST of EWM29066.1 vs. NCBI_GenBank
Match: gi|1173961993|gb|OQS07836.1| (hypothetical protein THRCLA_00171 [Thraustotheca clavata]) HSP 1 Score: 76.2554 bits (186), Expect = 3.727e-11 Identity = 53/208 (25.48%), Postives = 100/208 (48.08%), Query Frame = 0
Query: 251 SFLHVCRRAASSSPTPSASPASKILRTCSRVDGEVLATVMVRLKLAVQEGSYLKILGRGGGAGSLTAADKTVLDFRIRVNKIDRMLGAQEAQMVESKLRAAGLHSRGLSAQALVEWRRHKKLATSVEKLRGAMVNMLSIYHSIEGQHADMQVFAGLRGGNLALKQQKTAAKAMGLGGVEDVEEALREAQELIDESDELGKILSSPLMN 458
SFL +CR A+S++ + + L + + +A +V K A S +K G+ + + D T+L ++KI++ L + ++ +++A RG + +A+ WR K + T +E + A++N++S H + H + G + LA + + + L VE VEEAL E+++E ++ +ILS MN
Sbjct: 175 SFLSLCRSASSTA----SCHVRRFLEELPPEELQWIAIHLVYTKKAAMTQSAIKFFGKDAKSIEVNECDNTMLLLNHTISKIEKALTTLQTEINTMQIKAIDSKKRGATKEAINFWRHVKLMQTELENRQNALLNLISTKHKLRTMHVNAWTVEGYK---LATESLRITRDTLHL-SVESVEEALSSWNEVVEEQTQIEEILSKDTMN 374
BLAST of EWM29066.1 vs. NCBI_GenBank
Match: gi|669155402|ref|XP_008613263.1| (hypothetical protein SDRG_09127 [Saprolegnia diclina VS20] >gi|530734898|gb|EQC33140.1| hypothetical protein SDRG_09127 [Saprolegnia diclina VS20]) HSP 1 Score: 67.0106 bits (162), Expect = 3.650e-8 Identity = 82/335 (24.48%), Postives = 144/335 (42.99%), Query Frame = 0
Query: 148 WTVRTLVVKPVRRAWSYAIGHDGDFDDDTEMREAEDEQIASLRASRVHVGLCEAAAELVTAYFLSRPD-LERTVSLSEGGDEGAGDVQGDGGPGGQGGATAGMCSFLHVCRRAASSSPTPSASPASKILRTCSRVDGEVLATVMVRLKLAVQEGSYLKILGRGGGAGSLTAADKTVLDFRIRVNKIDRMLGAQEAQMVESKLRAAGLHSRGLSAQALVEWRRHKKLATSVEKLRGAMVNMLSIYHSIEGQHADMQVFAGLRGGNLALKQQKTAAKAMGLGGVEDVEEALREAQELIDESDELGKILSSPLMNREGPTEDIKEEELLKELEALAIA 481
W V V +P+R W+ ++ H +DD+ R + D SL + A V AY LS + L R L GP AT +F +CR A+ ASP ++ L + + + +A +V K AV + +K++ A ++ D+TVL ++ ++ L +A++ +A RG +A+AL WR K L V++ + A+VN+LS H + A + L G LA + ++ ++ L + V E L + +++DE + +L++ D +E E+E L++A
Sbjct: 115 WFVDVAVKRPMRWGWA-SLWHAIAAEDDS--RLSHDSPYLSLPT-------LASLATHVHAYALSTHEPLARVFCL---------------GPDHVTCATKDH-AFHMLCRAASRHD---EASPPAQFLAAVAADELDYIAFYLVYTKRAVMQAGLIKLVVLDATADAIGDGDRTVLLLYHTISTVETALATLQARVAAVAEKALEAKRRGSAAEALALWRHAKTLQADVDQRQNALVNLLSTKHQLGAMSAQATI---LEGYKLAAESLRSVRASLHL-STDAVAETLADWSDVMDEQRHMDDLLTA--------HADYNVDEAALEMELLSLA 408
BLAST of EWM29066.1 vs. NCBI_GenBank
Match: gi|1032643148|gb|OAQ24495.1| (SNF7 family protein [Mortierella elongata AG-77]) HSP 1 Score: 63.5438 bits (153), Expect = 5.783e-8 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 0
Query: 310 GGAGSLTAADKTVLDFRIRVNKIDRMLGAQEAQMVESKLRAAGLH-SRGLSAQALVEWRRHKKLATSVEKLRGAMVNMLSIYHSIEGQHADMQVFAGLRGGNLALKQQKTAAKAMGLGGVEDVEEALREAQELIDESDELGKILSSPL 456
G A +TA D+ +LD +++ +K+ R + +VE +LR A H ++G +AL+ RR K + +EK M N+ + SIE + QVFAGL GN LK+ K M L DVE+ + E + I +E+ ++LS+ L
Sbjct: 8 GAAAKITAHDRAILDLKVQRDKL-RQYNKRLEGVVEKELRLAKGHLAKGEKQRALLALRRKKFQESLLEKTVLQMTNLDELTMSIEQAMVEKQVFAGLAAGNQVLKE---LHKEMSLA---DVEKLMDETADSIAYQNEIDELLSTRL 148
BLAST of EWM29066.1 vs. NCBI_GenBank
Match: gi|673015392|ref|XP_008861657.1| (hypothetical protein H310_00596 [Aphanomyces invadans] >gi|574483255|gb|ETW10246.1| hypothetical protein H310_00596 [Aphanomyces invadans]) HSP 1 Score: 65.4698 bits (158), Expect = 1.123e-7 Identity = 105/470 (22.34%), Postives = 179/470 (38.09%), Query Frame = 0
Query: 28 ILKDWSNESKMLYYFEAVKSDECNVNPEVRRFWADAIVHYLADRKR----------SFVFNGEEIKLAYTRRSVLST-LCLPRILSELDTTKETCKLSSLTPCVGRVEAPLAARLWRTSWYLTEAGARFSAWTVRTLVVKPVRRAWSYAIGHDGDFDDDTEMREAEDEQIASLRASRVHVG------LCEAAAELVTAYFLSRPD-LERTVSLSEGGDEGAGDVQGDGGPGGQGGATAGMCSFLHVCRRAASSSPTPSASPASKILRTCSRVDGEVLATVMVRLKLAVQEGSYLKILGRGGGAGSLTAADKTVLDFRIRVNKIDRMLGAQEAQMVESKLRAAGLHSRGLSAQALVEWRRHKKLATSVEKLRGAMVNMLSIYHSIEGQHADMQVFAGLRGGNLALKQQKTAAKAMGLGGVEDVEEALREAQELIDESDELGKILSSPLMNREGPTEDIKEEELLKELEALA 479
++W ++ +M EA+ S + ++ W A++ L R S + E + + R+ V + L +LS + K+ L +V P W RT VV P R W H DE S A R+ G + + A + + +S + ERT LS Q D G + CSF +C R +S A P+ IL+ + + +A + K AV G LKI RG +TA D+++L + + ++ + +A+M E+K +A ALV R K L S+ + + ++N+L H + H V G + + ++ + ++GL V++A+ E Q + DE+ ++ +LSS P ++ L ELEAL+
Sbjct: 3 FFEEWDDDDRM----EALFSSSAIFDAKMLHAWKPAVLWTLRGRATDNSKNSALTPSLLIFPESLARRFVRKGVEPVPVVLNHVLSHMIQDKDLIHLEEFQAMCEQVSLP--------------------RWLFRTAVVTPAR--WGLHSLHSL----------WNDESSTSSAARRIPPGPYLPMEVLKTIAHAIVDFVMSELEPTERTFCLS----------QNDHATCGPRLS----CSFHALCLRVGASISDEMAIPS--ILKDLAPTEFAWIAKYLAWSKQAVIRGDLLKI-HRGQSPALVTAGDESLLVLQHMIATLEVSMAKLQAKMDETKAKAVARKRANNLTDALVYLRHSKTLGDSLAQRQAGLLNLLQTEHQLRDMHVQALVVDGYKVASASMHHVR---DSLGLTA-NAVDDAVAEWQIVADEASQIDVLLSS-----TAPGVAFDDDALAAELEALS 410 The following BLAST results are available for this feature:
BLAST of EWM29066.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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