EWM29104.1, cds1571 (CDS) Nannochloropsis gaditana

Overview
NameEWM29104.1
Unique Namecds1571
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:967281..969152 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29104.1
Productlysyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100024g62.4362.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:967281..969152 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0006430lysyl-tRNA aminoacylation
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004824lysine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II
IPR018150aa-tRNA-synt_II-like
IPR012340NA-bd_OB-fold
IPR004365NA-bd_OB_tRNA
IPR002313Lys-tRNA-ligase_II
IPR004364aa-tRNA-synt_II
IPR018149Lys-tRNA-synth_II_C
Homology
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|585111623|gb|EWM29104.1| (lysyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1274.61 bits (3297), Expect = 0.000e+0
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0
Query:    1 MGVYGIGSSTSTEKPKRLRRRGQPALKPSSAVLVLAVLVASATVRAFVPTRAPFKMLPIRSILRTVAVAVRPGIFPSRGLVVRMLSDGADVGPATAGSKKQKQKGTKKQTQVDEEPLTGAALTAKENELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGEEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKED 623
            MGVYGIGSSTSTEKPKRLRRRGQPALKPSSAVLVLAVLVASATVRAFVPTRAPFKMLPIRSILRTVAVAVRPGIFPSRGLVVRMLSDGADVGPATAGSKKQKQKGTKKQTQVDEEPLTGAALTAKENELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGEEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKED
Sbjct:    1 MGVYGIGSSTSTEKPKRLRRRGQPALKPSSAVLVLAVLVASATVRAFVPTRAPFKMLPIRSILRTVAVAVRPGIFPSRGLVVRMLSDGADVGPATAGSKKQKQKGTKKQTQVDEEPLTGAALTAKENELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGEEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKED 623          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|223998046|ref|XP_002288696.1| (lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335] >gi|220975804|gb|EED94132.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 328/503 (65.21%), Postives = 408/503 (81.11%), Query Frame = 0
Query:  127 NELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKW-AALEAGAEDE--SADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGE----EFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKE 622
            NEL+  R +KA +M   G   +A  Y    + + + K++   LE G EDE  +A++AVAGRIMARRVFGKLAF+TLQD++GVIQL  DK RLGE     F  LKA+TDSGDI+G +G+++RT+KGE+++Y  EW+MLTK+ LPLPDK+HGLTD++KRYR R +DLIVNP V++TF  RAK+ S LRR LD +GFLEIETP+L   PGGA+A+PF+T+HN++DMDLT+RIATELHLKRL++GGF RVYE+GRIFRNEGISTRHNPEFTSVELYQAYADY+DMMDLTEEL+ G+A  + ++  + Y   TI L+RPWRR TMH++V E++P  FD   L+D S  +L+ AK  A AAGVPDVG C +VG+V+ ACFEELCE  LIQPTFV D+PVEVSPL+KPHR+KPG+ ERFELF  GRE+AN+FSELTDPVDQR+RFEAQ  +KAA + EEA  VDEEFL+ALE+GMPPTGGLGIG+DRLVML +D+PSI+DVIAFPLLK +
Sbjct:    4 NELRESRLSKAASMRESGVEPYAYVYKPNRTASQLMKEYEGKLEPGEEDECDNAEIAVAGRIMARRVFGKLAFYTLQDETGVIQLQFDKKRLGERDADSFKNLKAWTDSGDIIGAKGTIRRTDKGELTLYATEWTMLTKSALPLPDKYHGLTDISKRYRNRHLDLIVNPSVRDTFYKRAKITSSLRRQLDAKGFLEIETPVLHTQPGGAEAKPFETYHNTMDMDLTLRIATELHLKRLIIGGFPRVYELGRIFRNEGISTRHNPEFTSVELYQAYADYHDMMDLTEELVCGMANEVSDSLIMPYGEYTISLERPWRRVTMHDIVKEEIP-DFDFD-LSDPS--TLDAAKAAATAAGVPDVGKCSTVGYVLNACFEELCEPKLIQPTFVIDYPVEVSPLSKPHRNKPGMVERFELFATGREMANSFSELTDPVDQRERFEAQAAKKAAGD-EEACDVDEEFLSALEQGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKPD 501          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|922856371|gb|KOO24733.1| (lysyl-tRNA synthetase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0
Identity = 323/496 (65.12%), Postives = 390/496 (78.63%), Query Frame = 0
Query:  127 NELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGEEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKE 622
            +EL V R  K + M  +G   +A +Y  T     +   +A L+ G E+ +ADVAV GRI+ RR+FGKLAFFT+QD SG +QLYL+K RLGE F  L + TD+GDIVG RGSVKRT+KGE+SVY REW+MLTKA+ PLPDKW GLTDVNKRYRQR +D+IVNP V++TF  RA++ S +RR +DERGFLEIETP LQ  PGGA+A+PF+TFHN+L M LT+RIATEL+LKRL+VGGF+RVYE+GRIFRNEGISTRHNPEFTS+ELYQAYADY DMMDL E LI G AK +     + YQ  T+ L  PWRR TM +LV E +P  FD + L   +   L +A+E A AAGVP+V  CQ+VG V+  CF+ELCE +LIQPTFVT++P E+SPLAKPHRSKPG+TERFELFV GRELANAFSELTDPVDQR+RFEAQ  +KAA + EEA  VDE+FL ALE GMPP GG+GIG+DRL+ML +D+ SIKDVIAFPLL+ E
Sbjct:  137 DELMVRRLAKVQQMRDDGVEPYAYSYTATHLAMKLAADFATLQNGEEEAAADVAVTGRILTRRIFGKLAFFTIQDASGTLQLYLEKKRLGEGFESLLSLTDAGDIVGARGSVKRTDKGELSVYAREWTMLTKAMRPLPDKWAGLTDVNKRYRQRYLDMIVNPSVRQTFATRARITSFIRRHMDERGFLEIETPCLQSEPGGAEAKPFETFHNALGMPLTLRIATELYLKRLIVGGFDRVYELGRIFRNEGISTRHNPEFTSIELYQAYADYTDMMDLAEALIAGAAKQVTGGTVVQYQGTTVDLTPPWRRVTMSDLVREAMPNGFDFAALT-GAEGDLARAREAAAAAGVPNVNECQTVGKVLALCFDELCEGNLIQPTFVTEYPTEISPLAKPHRSKPGVTERFELFVVGRELANAFSELTDPVDQRQRFEAQAAKKAAGD-EEACGVDEDFLNALEHGMPPCGGMGIGIDRLIMLLTDSASIKDVIAFPLLRPE 630          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|219110245|ref|XP_002176874.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411409|gb|EEC51337.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0
Identity = 315/482 (65.35%), Postives = 384/482 (79.67%), Query Frame = 0
Query:  140 MEAEGRPAFAATYPVTASVAHINKKWA-ALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGEEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLK 620
            M   G   F  T+  T + A +NK +   LE G EDESA+V+VAGRIM RRVFGKLAFFT+QD+ G+IQL  DKGRLG+ F  LK +TD  DI+GVRG+++RT+KGE++V+  EW MLTK++LPLPDK+HGL DV KRYR R +D+I NP V+ETFR RA + S LRRMLD++GFLEIETP L    GGA+A+PF+T+HNS+DM LT+RIATELHLKRL+VGGF+RVYEVGRIFRNEGISTRHNPEFTSVELYQAYADY DMM+LTEEL+  +A+ +  +  + Y    + L+RPWRR TMH++V E++P  FD S L     ESL  AK  A AAGVP+V    ++G+V+ ACFEELCE  LIQPTFV D+PV+VSPLAK HR+KPGLTERFELF  GRE ANAFSELTDP+DQR+RFEAQ  +KAA + EEA  VDE+FL ALE+GMPPTGGLGIG+DRLVML +++PSI+DVIAFPLL+
Sbjct:    1 MREVGVDPFEYTFATTHTSADLNKLYEHKLENGEEDESANVSVAGRIMTRRVFGKLAFFTMQDEMGMIQLQFDKGRLGDTFKNLKDWTDGSDIIGVRGTIRRTDKGELTVFATEWKMLTKSILPLPDKYHGLQDVTKRYRSRHLDMISNPGVRETFRKRALITSKLRRMLDDKGFLEIETPTLHTQSGGAEAKPFETYHNSMDMQLTLRIATELHLKRLIVGGFDRVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYDDMMNLTEELVCTIAEEVCGSLSIPYGEHMVSLERPWRRVTMHDIVKEEMP-DFDFSALDSQLPESLNTAKAAAIAAGVPNVQGLNTIGYVLNACFEELCEPKLIQPTFVIDYPVDVSPLAKRHRNKPGLTERFELFAVGREHANAFSELTDPIDQRERFEAQAAKKAAGD-EEACDVDEDFLQALEQGMPPTGGLGIGIDRLVMLLTNSPSIRDVIAFPLLR 480          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|298713460|emb|CBJ27015.1| (Lysyl-tRNA Synthetase [Ectocarpus siliculosus])

HSP 1 Score: 644.04 bits (1660), Expect = 0.000e+0
Identity = 313/501 (62.48%), Postives = 388/501 (77.45%), Query Frame = 0
Query:  128 ELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGEEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQ-----TIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKED 623
            EL+  R  KA  + A G   +A ++ VT S + + K+W  LEAG EDE A+V+VAGRIMARRVFGKLAFF +QD  G  QLY+DKGRLG+EF  LK +TD+GDIVG +G+VKRT+KGE+SVYV+ W+ML+K++LPLPDK+HGL D  KRYRQR VD++VNP V++ FR+RAK+ S +RR LD+  FLEIETP+LQ   GGA A+PF T HN LDM LT+RIATELHLKRLVVGGF+RVYE+GRIFRNEGISTRHNPEFTSVE+YQAYADY+DMM+LTE L+ G A  +L T  +    +      + L+ PWRR TM++LV EK+   F+   ++D +  +L  A+E A  AGV      ++ G+++  CFEELCEADLIQPT V DHP+EVSPLAKPHR+KPG TERFE+FV GRE+ANAFSELTDPVDQR RFE Q  +KAA + EEA  VD++FL ALERGMPPT GLGIG+DRL+ML + A SI+DVIAFPLL+ E+
Sbjct:  198 ELRAVRIGKAEEIRAAGGNPYAYSWDVTHSSSELQKQWEGLEAGTEDEEAEVSVAGRIMARRVFGKLAFFNMQDSEGSFQLYIDKGRLGDEFKDLKTWTDAGDIVGAKGTVKRTDKGELSVYVKSWAMLSKSVLPLPDKFHGLKDTEKRYRQRHVDMMVNPAVRDVFRMRAKVTSFIRRSLDDDDFLEIETPVLQSIAGGAAAKPFATHHNVLDMPLTLRIATELHLKRLVVGGFDRVYELGRIFRNEGISTRHNPEFTSVEVYQAYADYHDMMELTERLVAGAASEVLGTTAVSGGEEEGAPPDVDLKAPWRRVTMNDLVREKIGLDFEALDMSDPAA-ALATARETALKAGVHKAAGLETPGYILNECFEELCEADLIQPTIVMDHPIEVSPLAKPHRTKPGYTERFEVFVQGREMANAFSELTDPVDQRNRFELQAAKKAAGD-EEACDVDDDFLDALERGMPPTAGLGIGIDRLIMLLAGATSIRDVIAFPLLRAEN 696          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|1210525674|dbj|GAX15537.1| (lysyl-tRNA synthetase, class II [Fistulifera solaris])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 325/555 (58.56%), Postives = 412/555 (74.23%), Query Frame = 0
Query:   70 VRPGIFPSRGLVVRMLSDGADVGPATAGSKKQKQKGTKKQTQVDEEPLTGAALTAKENELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWA-ALEAGAEDESA-DVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGEEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKE 622
            + P I     L  ++ SD A    ATA +K +KQ   K+  Q   EP    +     +EL+  R  K +AM   G   F  T+ V+ + + +   +   LE G ED S   +A AGRI+ RRVFGKLAFFT+QD++G++QL LD+ RL + F  LK +TD GDI+GV G+++RT+KGE++++   W MLTKALLPLPDK+HGL DV KRYRQR VDLIVN  VK+TFR RA++ S +RR LD+RGFLE++TP+L   PGGA+A+PF+T+HN+LD++LTMRIATELHLKRL++GGFE+VYE+GRIFRNEGISTRHNPEFTS+ELYQAYADY+DMMDLTEEL+  LA  +  +  + Y    I  +RPWRR TMH++V E++  +FD + L +    SL KA+  A AAGVPDV +  +VG ++ ACFEELCE + IQPTFV D+PVEVSPLAKPHR+K GLTERFELF  GRE AN+FSELTDPVDQR RFEAQ  +KAA + EEA  VDE+FL ALE+GMPPTGGLGIG+DRLVML +++ SI+DVIAFPLLK E
Sbjct:   66 LEPYIAELLALKTQLPSDEAPAAVATA-TKTKKQSPPKQNQQRKNEPQPELS----NSELRQIRLQKVQAMRDAGINPFEYTFDVSHTASRLTALYQDKLEPGEEDSSGVTIATAGRILTRRVFGKLAFFTIQDETGILQLQLDQNRLADNFQTLKDWTDGGDIIGVTGTMRRTDKGELTLWCNSWQMLTKALLPLPDKFHGLQDVTKRYRQRHVDLIVNSNVKDTFRKRAQISSQIRRFLDDRGFLEMDTPVLNSVPGGAEAKPFETYHNALDLELTMRIATELHLKRLIIGGFEKVYEMGRIFRNEGISTRHNPEFTSIELYQAYADYHDMMDLTEELVCELALKVCGSLTVPYGEHQISFERPWRRVTMHDIVKERM--KFDFAELQEFDEASLAKARAAAAAAGVPDVASLPTVGQILNACFEELCEPECIQPTFVIDYPVEVSPLAKPHRTKAGLTERFELFAVGREHANSFSELTDPVDQRIRFEAQAAKKAAGD-EEACDVDEDFLQALEQGMPPTGGLGIGIDRLVMLLTNSASIRDVIAFPLLKPE 612          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|1210160656|dbj|BAY79741.1| (lysyl-tRNA synthetase (plasmid) [Nostoc linckia NIES-25])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 307/505 (60.79%), Postives = 394/505 (78.02%), Query Frame = 0
Query:  126 ENELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGE--------EFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKE 622
            E +L+  R  K   ++  G   +A  +  T   A + +++A L +G E+   +VA+AGRIMARRVFGKLAFFTLQD++G IQLYL+K R+ E         F  LK  TD+GDI+G +G++KRTEKGE+SVYV+++++LTK+LLPLPDKWHGLTDV KRYRQR VDLIVNP+V++TFR RA++ +G+RR L++R FLEIETP+LQ   GGADARPF T+HN+L+M+L +RIATELHLKRL+VGGFE+V+E+GRIFRNEGISTRHNPEFT++E+YQAYADY DMM+LTE +I  +A+ +L T  + YQ ++I L  PWRR TMH+LV E       ++ L  NS ++LE+AK  ++ AG+PD+   QS+G ++   FEE  EA+LIQPTFV D+PVE+SPLAKPHRS+PGL ERFELF+ GRE  N+FSELTD +DQR+R EAQ  RKAA +L EA  VDE+FL ALE GMPPTGGLGIG+DRLVML +D+PSI+DVIAFPLLK E
Sbjct:    3 EEDLRAARLEKVNQLKQLGTNPYAYRWESTHHAAQLQEQFADLASG-EEVDLEVAIAGRIMARRVFGKLAFFTLQDETGTIQLYLEKNRIQEGMAEIDADAFNHLKQLTDAGDILGAKGTIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNPEFTTIEIYQAYADYNDMMELTEGIITTVAQEVLGTLQITYQGESIDLTPPWRRVTMHDLVKE-------VTGLDFNSFQTLEEAKTASKNAGIPDIDEAQSIGKLLNLAFEEKVEANLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELFIVGRETGNSFSELTDAIDQRERLEAQAARKAAGDL-EAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKPE 498          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|1057522109|ref|WP_068818981.1| (lysine--tRNA ligase [Phormidesmis priestleyi])

HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0
Identity = 308/504 (61.11%), Postives = 389/504 (77.18%), Query Frame = 0
Query:  127 NELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLG--------EEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKE 622
            ++L+  R  K   ++  G   +A  +  T   A + +K+A L +G E E  +VA+AGRIMARRVFGKLAFFTLQD++G IQLYLDK R+         + F  LK  TD+GDI+G  G++KRTEKGE+SVYV  + MLTK+LLPLPDKWHGLTDV KRYRQR VDLIVNP+V++TFR RA + +G+RR LD++GF+EIETP+L    GGADARPF T+HN++DM+L +RIATELHLKRL+VGGFE+V+E+GRIFRNEGISTRHNPEFT++E+YQAYADYYDMM LTE ++  +A+ +L T  ++YQ + I+L  PWRR TMHE+V EK    F       +  +SL++AK  A+AAG+ D+  C S+G+++   FE+  E  LIQPTFV D+P+E+SPLAKPHRSKPGL ERFELF+ GRE AN+FSELTDP+DQR R EAQ +RKAA +L EA  VDE+FL ALE GMPPTGGLGIG+DRLVM+ +DAPSI+DVIAFPLLK E
Sbjct:    3 DDLRATRLEKVEQLKQLGVNPYAYKWQSTHHAAELQEKYADLASGEEVE-VEVAIAGRIMARRVFGKLAFFTLQDETGTIQLYLDKTRIQANMGDADPQAFDHLKQLTDAGDIIGANGTIKRTEKGELSVYVNHYVMLTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRALITAGIRRYLDQQGFIEIETPVLLSEAGGADARPFTTYHNTMDMELYLRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNPEFTTIEVYQAYADYYDMMALTEAIVTTVAQEVLETLKIIYQGEAINLTPPWRRVTMHEIVHEKTGVDF-------SQFQSLDEAKVAAKAAGLHDIEKCVSIGNLLNEAFEQKVEDTLIQPTFVLDYPIEISPLAKPHRSKPGLVERFELFIVGRETANSFSELTDPLDQRARLEAQADRKAAGDL-EAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMVLTDAPSIRDVIAFPLLKPE 497          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|1121332640|ref|WP_073640539.1| (lysine--tRNA ligase [Nostoc calcicola] >gi|1115274875|gb|OKH38227.1| lysine--tRNA ligase [Nostoc calcicola FACHB-389])

HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0
Identity = 309/505 (61.19%), Postives = 391/505 (77.43%), Query Frame = 0
Query:  126 ENELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRLGE--------EFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKE 622
            E +L+  R  K   ++  G   +A  +  T   A + +++A L +G E+   +VA+AGRIMARRVFGKLAFFTLQD+SG IQLYL+K R+ E         F  LK  TD+GDI+G +G++KRTEKGE+SVYV+++++LTK+LLPLPDKWHGLTDV KRYRQR VDLIVNP+V++TFR RA++ +G+RR L+ER FLEIETP+LQ   GGADARPF T+HN+L+M+L +RIATEL+LKRL+VGGFE+V+EVGRIFRNEGISTRHNPEFT +E+YQAYADY DMM LTE +I  +A+ +L T  + YQ ++I L  PWRR TMH+LV E       ++ L  NS +SLE+AK  ++ AG+PD+   QS+G ++   FEE  EA+LIQPTFV D+PVE+SPLAKPHRS+PGL ERFELF+ GRE  N+FSELTD +DQR+R EAQ  RKAA +L EA  VDE+FL ALE GMPPTGGLGIG+DRLVML +D+ SI+DVIAFPLLK E
Sbjct:    3 EEDLRAARLEKVNQLKQLGTNPYAYRWESTHHAAQLQEQFADLASG-EEVDLEVAIAGRIMARRVFGKLAFFTLQDESGTIQLYLEKNRIQEGMADIDADAFNHLKQLTDAGDILGAKGTIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEERDFLEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELYLKRLIVGGFEKVFEVGRIFRNEGISTRHNPEFTMIEIYQAYADYNDMMALTEGIITTVAQEVLGTLQITYQGESIDLTPPWRRVTMHDLVKE-------VTGLDFNSFQSLEEAKTASKNAGIPDIDEAQSIGKLLNLAFEEKVEANLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELFIVGRETGNSFSELTDAIDQRERLEAQAARKAAGDL-EAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLKPE 498          
BLAST of EWM29104.1 vs. NCBI_GenBank
Match: gi|1049311749|gb|OCQ90024.1| (lysine--tRNA ligase [Nostoc sp. MBR 210])

HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 308/505 (60.99%), Postives = 390/505 (77.23%), Query Frame = 0
Query:  126 ENELKVDRWNKARAMEAEGRPAFAATYPVTASVAHINKKWAALEAGAEDESADVAVAGRIMARRVFGKLAFFTLQDDSGVIQLYLDKGRL--------GEEFTKLKAYTDSGDIVGVRGSVKRTEKGEISVYVREWSMLTKALLPLPDKWHGLTDVNKRYRQREVDLIVNPQVKETFRLRAKMFSGLRRMLDERGFLEIETPILQVHPGGADARPFKTFHNSLDMDLTMRIATELHLKRLVVGGFERVYEVGRIFRNEGISTRHNPEFTSVELYQAYADYYDMMDLTEELIHGLAKSLLNTEDLVYQNQTIHLQRPWRRTTMHELVAEKLPGQFDLSTLADNSVESLEKAKEVARAAGVPDVGTCQSVGHVVQACFEELCEADLIQPTFVTDHPVEVSPLAKPHRSKPGLTERFELFVYGRELANAFSELTDPVDQRKRFEAQVERKAALNLEEAATVDEEFLAALERGMPPTGGLGIGLDRLVMLFSDAPSIKDVIAFPLLKKE 622
            E +++  R  K   ++  G   +A  +  T + A + +K+A L +G E+   +VA+AGRIMARRVFGKLAFFTLQD++G IQLYL+K R+         E F  LK  TD+GDI+GV+G++KRTEKGE+SVYV+++++LTK+LLPLPDKWHGLTDV KRYRQR VDLIVNP+V++TFR RA++ +G+RR L++R FLEIETP+LQ   GGADARPF T+HN+L+M+L +RIATELHLKRL+VGGFE+V+E+GRIFRNEGISTRHNPEFTS+E+YQAYADY DMM LTE ++  +A+ +L T  + YQ +T+ L  PWRR TMH+LV E       ++ L  NS  SL  AK  A+ AG+P     QS+G ++   FEE  E +LIQPTFV D+PVE+SPLAKPHRS+PGL ERFELF+ GRE AN+FSELTDP+DQR+R EAQ  RKAA +L EA  VDE+FL ALE GMPPTGGLGIG+DRLVML +D+ SI+DVIAFPLLK E
Sbjct:    3 EEDIRAARLEKVDQIKQLGANPYAYRWESTHNAAQLQEKFADLASG-EEVDLEVAIAGRIMARRVFGKLAFFTLQDETGTIQLYLEKNRIQESMAEIDAEAFNHLKQLTDAGDILGVKGTIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELHLKRLIVGGFEKVFEMGRIFRNEGISTRHNPEFTSIEIYQAYADYNDMMALTEGIVTTVAQEVLGTLQITYQGETVDLTPPWRRVTMHDLVKE-------VTGLDFNSFPSLSDAKAAAKNAGIPGTDEAQSIGKLLNLAFEEKVETNLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELFIVGRETANSFSELTDPIDQRERLEAQAARKAAGDL-EAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLKPE 498          
The following BLAST results are available for this feature:
BLAST of EWM29104.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111623|gb|EWM29104.1|0.000e+0100.00lysyl-trna synthetase [Nannochloropsis gaditana][more]
gi|223998046|ref|XP_002288696.1|0.000e+065.21lysyl-trna synthetase [Thalassiosira pseudonana CC... [more]
gi|922856371|gb|KOO24733.1|0.000e+065.12lysyl-tRNA synthetase [Chrysochromulina sp. CCMP29... [more]
gi|219110245|ref|XP_002176874.1|0.000e+065.35predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|298713460|emb|CBJ27015.1|0.000e+062.48Lysyl-tRNA Synthetase [Ectocarpus siliculosus][more]
gi|1210525674|dbj|GAX15537.1|0.000e+058.56lysyl-tRNA synthetase, class II [Fistulifera solar... [more]
gi|1210160656|dbj|BAY79741.1|0.000e+060.79lysyl-tRNA synthetase (plasmid) [Nostoc linckia NI... [more]
gi|1057522109|ref|WP_068818981.1|0.000e+061.11lysine--tRNA ligase [Phormidesmis priestleyi][more]
gi|1121332640|ref|WP_073640539.1|0.000e+061.19lysine--tRNA ligase [Nostoc calcicola] >gi|1115274... [more]
gi|1049311749|gb|OCQ90024.1|0.000e+060.99lysine--tRNA ligase [Nostoc sp. MBR 210][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1575rna1575Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications