EWM30502.1, cds157 (CDS) Nannochloropsis gaditana

Overview
NameEWM30502.1
Unique Namecds157
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:406839..407063 -
Alignment locationCM002455.1:406386..406545 -
Alignment locationCM002455.1:406186..406260 -
Alignment locationCM002455.1:406040..406132 -
Alignment locationCM002455.1:405830..405960 -

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Properties
Property NameValue
Protein idEWM30502.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100013g63.9790.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:406839..407063 -
CM002455.1supercontigCM002455.1:406386..406545 -
CM002455.1supercontigCM002455.1:406186..406260 -
CM002455.1supercontigCM002455.1:406040..406132 -
CM002455.1supercontigCM002455.1:405830..405960 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM30502.1 vs. NCBI_GenBank
Match: gi|585113166|gb|EWM30502.1| (hypothetical protein Naga_100013g63 [Nannochloropsis gaditana])

HSP 1 Score: 469.929 bits (1208), Expect = 1.208e-167
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 
Query:    1 MFIAQVSREGHCKSCPSPSSLPVVIPLLPQRTAFASSFLPCLLFNMKVAASCQLLVALWVFLFMSSGNAFVFRPQPLTRSSRTVLREGFDFMEMGSRFLNELLPWGDAKKGMWAGKRDAMVVKYMEKTGISKEQAEREVDEYLKDKDAYIAKAPNSLVAPREGKHPGEGNKPRTGVDARERAVSYNLAFRRSAPAACINPVSLKTDSSKDFILIAHFDGLKTGRRCL 227
            MFIAQVSREGHCKSCPSPSSLPVVIPLLPQRTAFASSFLPCLLFNMKVAASCQLLVALWVFLFMSSGNAFVFRPQPLTRSSRTVLREGFDFMEMGSRFLNELLPWGDAKKGMWAGKRDAMVVKYMEKTGISKEQAEREVDEYLKDKDAYIAKAPNSLVAPREGKHPGEGNKPRTGVDARERAVSYNLAFRRSAPAACINPVSLKTDSSKDFILIAHFDGLKTGRRCL
Sbjct:    1 MFIAQVSREGHCKSCPSPSSLPVVIPLLPQRTAFASSFLPCLLFNMKVAASCQLLVALWVFLFMSSGNAFVFRPQPLTRSSRTVLREGFDFMEMGSRFLNELLPWGDAKKGMWAGKRDAMVVKYMEKTGISKEQAEREVDEYLKDKDAYIAKAPNSLVAPREGKHPGEGNKPRTGVDARERAVSYNLAFRRSAPAACINPVSLKTDSSKDFILIAHFDGLKTGRRCL 227
The following BLAST results are available for this feature:
BLAST of EWM30502.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113166|gb|EWM30502.1|1.208e-167100.00hypothetical protein Naga_100013g63 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna157rna157Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications