EWM29106.1, cds1567 (CDS) Nannochloropsis gaditana

Overview
NameEWM29106.1
Unique Namecds1567
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:960160..962457 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29106.1
ProductAAA ATPase domain protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100007g1.6433.mrna
GbkeyCDS
End range.
End range962457
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:960160..962457 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0000808origin recognition complex
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR020796ORC5
IPR003593AAA+_ATPase
Homology
[Close]
BLAST of EWM29106.1 vs. NCBI_GenBank
Match: gi|585111626|gb|EWM29106.1| (AAA+ ATPase domain protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 1526.53 bits (3951), Expect = 0.000e+0
Identity = 766/766 (100.00%), Postives = 766/766 (100.00%), Query Frame = 0 
Query:    1 MFSFITGNGRKRARGSARSFFGSEVGKTEDGASSGSTSSDPKATDLPQFNKDNARQHLSDIEKKRQESIRENQEFLKQLGLKDVKLSLRDASPADPNPPTESVRSLSHPHDSAMSIGASSSPVPPTLEQVKAKWVGRGAQIDALALLLPSPGEASPSSSVILVHGPSGGGKTGVVADVLRALQLPHAHIRGVEHPTARSLYSTIAAAWLRHLESQSRVCGYQDLGYVEEDDWVDEDAQQVEKARAAEAQGRRRGVTSELSVKREGKAERWVRGGWEEGEGEKEDSVRGHFSEEEGSVDDNSQEEKEEGEEEEEEEEEEEEEEDPYFAQRSSVLEGSEGRGLEAGLMPLPHRCATMAGLLHLLRSWRGQGSRGQRAGPEGPDKTPFVVVLDSADRLPGGVGSVRHELLELPSMLEGPKGRRRDWGQGGTASRVALSVVLVAEAPESVPGALEGGAALHLPFPAYTKAQATEILLRSLRAAAGVSPFLPHGGGGEVREEEKAVEALMKDLVTMLVASLYSSTRDVREMRRMAVLLSERYLAPVLSEGACGGGENGTQGDAGEPGRPRGGGGGGKGGRGAFGHLDLFEHVRPLLHRATHSCLHMPAVLAPGLEAGPAPVGSVLSRDPAGWDGHRLEGPRPSSSPPARPPPRALLRYELPKLALYLLLAAFLASHLPPDTDMHLFALPSARGGRRTHRSAASATRVAEAKDAEARKEGVRAFSLERLLSIFTCLIALSRTTGAAYANNTGTTELFAQINTLVRHRLLLRS 766
            MFSFITGNGRKRARGSARSFFGSEVGKTEDGASSGSTSSDPKATDLPQFNKDNARQHLSDIEKKRQESIRENQEFLKQLGLKDVKLSLRDASPADPNPPTESVRSLSHPHDSAMSIGASSSPVPPTLEQVKAKWVGRGAQIDALALLLPSPGEASPSSSVILVHGPSGGGKTGVVADVLRALQLPHAHIRGVEHPTARSLYSTIAAAWLRHLESQSRVCGYQDLGYVEEDDWVDEDAQQVEKARAAEAQGRRRGVTSELSVKREGKAERWVRGGWEEGEGEKEDSVRGHFSEEEGSVDDNSQEEKEEGEEEEEEEEEEEEEEDPYFAQRSSVLEGSEGRGLEAGLMPLPHRCATMAGLLHLLRSWRGQGSRGQRAGPEGPDKTPFVVVLDSADRLPGGVGSVRHELLELPSMLEGPKGRRRDWGQGGTASRVALSVVLVAEAPESVPGALEGGAALHLPFPAYTKAQATEILLRSLRAAAGVSPFLPHGGGGEVREEEKAVEALMKDLVTMLVASLYSSTRDVREMRRMAVLLSERYLAPVLSEGACGGGENGTQGDAGEPGRPRGGGGGGKGGRGAFGHLDLFEHVRPLLHRATHSCLHMPAVLAPGLEAGPAPVGSVLSRDPAGWDGHRLEGPRPSSSPPARPPPRALLRYELPKLALYLLLAAFLASHLPPDTDMHLFALPSARGGRRTHRSAASATRVAEAKDAEARKEGVRAFSLERLLSIFTCLIALSRTTGAAYANNTGTTELFAQINTLVRHRLLLRS
Sbjct:    1 MFSFITGNGRKRARGSARSFFGSEVGKTEDGASSGSTSSDPKATDLPQFNKDNARQHLSDIEKKRQESIRENQEFLKQLGLKDVKLSLRDASPADPNPPTESVRSLSHPHDSAMSIGASSSPVPPTLEQVKAKWVGRGAQIDALALLLPSPGEASPSSSVILVHGPSGGGKTGVVADVLRALQLPHAHIRGVEHPTARSLYSTIAAAWLRHLESQSRVCGYQDLGYVEEDDWVDEDAQQVEKARAAEAQGRRRGVTSELSVKREGKAERWVRGGWEEGEGEKEDSVRGHFSEEEGSVDDNSQEEKEEGEEEEEEEEEEEEEEDPYFAQRSSVLEGSEGRGLEAGLMPLPHRCATMAGLLHLLRSWRGQGSRGQRAGPEGPDKTPFVVVLDSADRLPGGVGSVRHELLELPSMLEGPKGRRRDWGQGGTASRVALSVVLVAEAPESVPGALEGGAALHLPFPAYTKAQATEILLRSLRAAAGVSPFLPHGGGGEVREEEKAVEALMKDLVTMLVASLYSSTRDVREMRRMAVLLSERYLAPVLSEGACGGGENGTQGDAGEPGRPRGGGGGGKGGRGAFGHLDLFEHVRPLLHRATHSCLHMPAVLAPGLEAGPAPVGSVLSRDPAGWDGHRLEGPRPSSSPPARPPPRALLRYELPKLALYLLLAAFLASHLPPDTDMHLFALPSARGGRRTHRSAASATRVAEAKDAEARKEGVRAFSLERLLSIFTCLIALSRTTGAAYANNTGTTELFAQINTLVRHRLLLRS 766
[Close]
BLAST of EWM29106.1 vs. NCBI_GenBank
Match: gi|553193621|ref|XP_005855807.1| (cell division cycle 5-like protein [Nannochloropsis gaditana CCMP526] >gi|422293254|gb|EKU20554.1| cell division cycle 5-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1513.82 bits (3918), Expect = 0.000e+0
Identity = 756/758 (99.74%), Postives = 756/758 (99.74%), Query Frame = 0 
Query:    1 MFSFITGNGRKRARGSARSFFGSEVGKTEDGASSGSTSSDPKATDLPQFNKDNARQHLSDIEKKRQESIRENQEFLKQLGLKDVKLSLRDASPADPNPPTESVRSLSHPHDSAMSIGASSSPVPPTLEQVKAKWVGRGAQIDALALLLPSPGEASPSSSVILVHGPSGGGKTGVVADVLRALQLPHAHIRGVEHPTARSLYSTIAAAWLRHLESQSRVCGYQDLGYVEEDDWVDEDAQQVEKARAAEAQGRRRGVTSELSVKREGKAERWVRGGWEEGEGEKEDSVRGHFSEEEGSVDDNSQEEKEEGEEEEEEEEEEEEEEDPYFAQRSSVLEGSEGRGLEAGLMPLPHRCATMAGLLHLLRSWRGQGSRGQRAGPEGPDKTPFVVVLDSADRLPGGVGSVRHELLELPSMLEGPKGRRRDWGQGGTASRVALSVVLVAEAPESVPGALEGGAALHLPFPAYTKAQATEILLRSLRAAAGVSPFLPHGGGGEVREEEKAVEALMKDLVTMLVASLYSSTRDVREMRRMAVLLSERYLAPVLSEGACGGGENGTQGDAGEPGRPRGGGGGGKGGRGAFGHLDLFEHVRPLLHRATHSCLHMPAVLAPGLEAGPAPVGSVLSRDPAGWDGHRLEGPRPSSSPPARPPPRALLRYELPKLALYLLLAAFLASHLPPDTDMHLFALPSARGGRRTHRSAASATRVAEAKDAEARKEGVRAFSLERLLSIFTCLIALSRTTGAAYANNTGTTELFAQINTLV 758
            MFSFITGNGRKRARGSARSFFGSEVGKTEDGASSGSTSSDPKATDLPQFNKDNARQHLSDIEKKRQESIRENQEFLKQLGLKDVKLSLRDASPADPNPPTESVRSLSHPHDSAMSIGASSSPVPPTLEQVKAKWVGRGAQIDALALLLPSPGEASPSSSVILVHGPSGGGKTGVVADVLRALQLPHAHIRGVEHPTARSLYSTIAAAWLRHLESQSRVCGYQDLGYVEEDDWVDEDAQQVEKARAAEAQGRRRGVTSELSVKREGKAERWVRGGWEEGEGEKEDSVRGHFSEEEGS DDNSQEEKEEGEEEEEEEEEEEEEEDPYFAQRSSVLEGSEGRGLEAGLMPLPHRCATMAGLLHLLRSWRGQGSRGQRAGPEGPDKTPFVVVLDSADRLPGGVGSVRHELLELPSMLEGPKGRRRDWGQGGTASRVALSVVLVAEAPESVPGALEGGAALHLPFPAYTKAQATEILLRSLRAAAGVSPFLPHGGGG VREEEKAVEALMKDLVTMLVASLYSSTRDVREMRRMAVLLSERYLAPVLSEGACGGGENGTQGDAGEPGRPRGGGGGGKGGRGAFGHLDLFEHVRPLLHRATHSCLHMPAVLAPGLEAGPAPVGSVLSRDPAGWDGHRLEGPRPSSSPPARPPPRALLRYELPKLALYLLLAAFLASHLPPDTDMHLFALPSARGGRRTHRSAASATRVAEAKDAEARKEGVRAFSLERLLSIFTCLIALSRTTGAAYANNTGTTELFAQINTLV
Sbjct:    1 MFSFITGNGRKRARGSARSFFGSEVGKTEDGASSGSTSSDPKATDLPQFNKDNARQHLSDIEKKRQESIRENQEFLKQLGLKDVKLSLRDASPADPNPPTESVRSLSHPHDSAMSIGASSSPVPPTLEQVKAKWVGRGAQIDALALLLPSPGEASPSSSVILVHGPSGGGKTGVVADVLRALQLPHAHIRGVEHPTARSLYSTIAAAWLRHLESQSRVCGYQDLGYVEEDDWVDEDAQQVEKARAAEAQGRRRGVTSELSVKREGKAERWVRGGWEEGEGEKEDSVRGHFSEEEGSADDNSQEEKEEGEEEEEEEEEEEEEEDPYFAQRSSVLEGSEGRGLEAGLMPLPHRCATMAGLLHLLRSWRGQGSRGQRAGPEGPDKTPFVVVLDSADRLPGGVGSVRHELLELPSMLEGPKGRRRDWGQGGTASRVALSVVLVAEAPESVPGALEGGAALHLPFPAYTKAQATEILLRSLRAAAGVSPFLPHGGGGMVREEEKAVEALMKDLVTMLVASLYSSTRDVREMRRMAVLLSERYLAPVLSEGACGGGENGTQGDAGEPGRPRGGGGGGKGGRGAFGHLDLFEHVRPLLHRATHSCLHMPAVLAPGLEAGPAPVGSVLSRDPAGWDGHRLEGPRPSSSPPARPPPRALLRYELPKLALYLLLAAFLASHLPPDTDMHLFALPSARGGRRTHRSAASATRVAEAKDAEARKEGVRAFSLERLLSIFTCLIALSRTTGAAYANNTGTTELFAQINTLV 758
The following BLAST results are available for this feature:
BLAST of EWM29106.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585111626|gb|EWM29106.1|0.000e+0100.00AAA+ ATPase domain protein, partial [Nannochlorops... [more]
gi|553193621|ref|XP_005855807.1|0.000e+099.74cell division cycle 5-like protein [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1571rna1571Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications