EWM29209.1, cds1563 (CDS) Nannochloropsis gaditana

Overview
NameEWM29209.1
Unique Namecds1563
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:950331..950447 -
Alignment locationCM002457.1:950071..950208 -
Alignment locationCM002457.1:949910..949963 -
Alignment locationCM002457.1:949492..949761 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29209.1
Productprotein of unknown function DUF862, eukaryotic
Orig transcript idgnl|cribi|Naga_100007g6.6536.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:950331..950447 -
CM002457.1supercontigCM002457.1:950071..950208 -
CM002457.1supercontigCM002457.1:949910..949963 -
CM002457.1supercontigCM002457.1:949492..949761 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008580PPPDE_dom
Homology
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|553193628|ref|XP_005855809.1| (hypothetical protein NGA_0588500 [Nannochloropsis gaditana CCMP526] >gi|422293256|gb|EKU20556.1| hypothetical protein NGA_0588500 [Nannochloropsis gaditana CCMP526] >gi|585111729|gb|EWM29209.1| protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana])

HSP 1 Score: 397.127 bits (1019), Expect = 4.406e-140
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query:    1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192
            MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS
Sbjct:    1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|585111728|gb|EWM29208.1| (protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana])

HSP 1 Score: 316.235 bits (809), Expect = 1.998e-108
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
Query:   39 EVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192
            +VGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS
Sbjct:    9 KVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 162          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|299116898|emb|CBN75008.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 134.806 bits (338), Expect = 2.021e-36
Identity = 75/192 (39.06%), Postives = 113/192 (58.85%), Query Frame = 0
Query:    3 ASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREE-FAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKA--KEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSS 191
            +S  R V LNVY+L +   + SW++ +GLGA+H+G+E+GGVEYTF++ GV  H P+     +G  VS K + V+G+ +G+  +V  I+N L+ E FA G Y V R NCNH+ D L   L G  +P WVNR A I +    G +K +    +K      ++   A    ++ +KELTQ Q++ L+ +R   SS
Sbjct:    2 SSGVRPVQLNVYDLHE---SNSWLQHIGLGAYHSGLEIGGVEYTFSEAGVAQHPPRQ---IAGDGVSFKTTEVLGDFIGTMPDVRRILNGLKAEGFAEGEYDVIRNNCNHFCDELAFALTGKRIPPWVNRAATIATWAGLGESKKEGANDKKGGAGTAASSATASAPPSRDRKELTQKQRDLLSKMRTNKSS 187          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|669140320|ref|XP_008605728.1| (hypothetical protein SDRG_01949 [Saprolegnia diclina VS20] >gi|530742642|gb|EQC40884.1| hypothetical protein SDRG_01949 [Saprolegnia diclina VS20])

HSP 1 Score: 115.161 bits (287), Expect = 9.530e-29
Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 0
Query:    1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS 140
            MA   +  VILNVY+L D     ++   +GLGA+H+GV++ G EY+FA   G+F   PK    A G V   +ESI MG   GS+N+   ++++LR EF    Y++  KNCN +S+ LC RL+G  +PA+VNR A +GS  S
Sbjct:    1 MAKKGKTAVILNVYDLMDAN---AYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLLGVPIPAYVNRMAYLGSFLS 133          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|813225908|ref|XP_012212031.1| (hypothetical protein SPRG_17305 [Saprolegnia parasitica CBS 223.65] >gi|641521779|gb|KDO17263.1| hypothetical protein SPRG_17305 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 114.775 bits (286), Expect = 1.418e-28
Identity = 75/208 (36.06%), Postives = 109/208 (52.40%), Query Frame = 0
Query:    1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS------FGGNKDKAKEKTRT--------------EKVSARTKAENAAAKKKKELTQDQKNRLAAIRR 187
            MA   +  VILNVY+L +     ++   +GLGA+H+GV++ G EY+FA   G+F   PK    A G V   +ESI MG   GS+N+   ++++LR EF    Y++  KNCN +S+ LC RLVG  +PA+VNR A +GS  S        G      + T T                +S R  A +    +  E+ + +K RLAA+RR
Sbjct:    1 MAKKGKTAVILNVYDLVEAN---AYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLVGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPVEADSTPTAANNPRASYTSFGGSGISLRGTAPSTDTDEDMEVRR-EKRRLAAMRR 199          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|813134393|ref|XP_012198138.1| (hypothetical protein SPRG_04142 [Saprolegnia parasitica CBS 223.65] >gi|641537091|gb|KDO30954.1| hypothetical protein SPRG_04142 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 114.005 bits (284), Expect = 3.008e-28
Identity = 74/208 (35.58%), Postives = 109/208 (52.40%), Query Frame = 0
Query:    1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS------FGGNKDKAKEKTRTEK--------------VSARTKAENAAAKKKKELTQDQKNRLAAIRR 187
            MA   +  VILNVY+L +     ++   +GLGA+H+GV++ G EY+FA   G+F   PK    A G V   +ESI MG   GS+N+   ++++LR EF    Y++  KNCN +S+ LC RL+G  +PA+VNR A +GS  S        G      + T T                +S R  A +    +  E+ + +K RLAA+RR
Sbjct:    1 MAKKGKTAVILNVYDLMEAN---AYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLLGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPVEADSTPTTANTPRASYTSFGGSGISLRGTAPSTDTDEDMEVRR-EKRRLAAMRR 199          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|902145781|gb|KNA05002.1| (hypothetical protein SOVF_194450 [Spinacia oleracea])

HSP 1 Score: 114.005 bits (284), Expect = 5.561e-28
Identity = 69/188 (36.70%), Postives = 99/188 (52.66%), Query Frame = 0
Query:    9 VILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTF-----AQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSS 191
            V LNVY+LT   G   W+   GLG +H+GV+V G+EY F     A  GVF   PK      G   + ++SI++G     A EV  ++ KL +E+    YH+  KNCNH+ + LC RL G  +P+WVNR AR+G +         A ++ +   + A +KA +   KKK    + Q NR      TSS+
Sbjct:   17 VYLNVYDLTPINGYAYWL---GLGVYHSGVQVHGIEYAFGAHDHATTGVFEVEPKQ---CPG--FTFRKSILIGRTDLGAKEVRALMEKLSKEYFGNTYHLISKNCNHFCNDLCIRLTGRPIPSWVNRLARLGLLCK--CVLPAALDEAKVRHIRAESKARSEVDKKK---LRSQSNRFEPSNSTSST 191          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|731316816|ref|XP_010665872.1| (PREDICTED: deSI-like protein At4g17486 [Beta vulgaris subsp. vulgaris] >gi|870868151|gb|KMT19020.1| hypothetical protein BVRB_2g031160 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 110.153 bits (274), Expect = 1.719e-26
Identity = 68/188 (36.17%), Postives = 97/188 (51.60%), Query Frame = 0
Query:    9 VILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTF-----AQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSS 191
            V LNVY+LT   G   W+   GLG +H+GV+V GVEY F     A  GVF   PK      G   + ++SI++G     A EV  ++ KL +E+    YH+  KNCNH+ + LC RL G  +P+WVNR AR+G +         A ++T+   + A  K  +   KK     + Q +R      TSS+
Sbjct:   17 VYLNVYDLTPINGYAYWL---GLGVYHSGVQVHGVEYAFGAHDNATTGVFEVEPKQ---CPG--FTFRKSILIGRTDLGAKEVRALMEKLSKEYFGNTYHLISKNCNHFCNDLCIRLSGKPIPSWVNRLARLGLLCK--CVLPAALDETKVRHIRAENKVRDVDKKK----LRSQSSRFEPSNSTSST 190          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|403342718|gb|EJY70683.1| (PPPDE putative thiol peptidase family protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 109.383 bits (272), Expect = 2.508e-26
Identity = 51/135 (37.78%), Postives = 85/135 (62.96%), Query Frame = 0
Query:    8 DVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQN------GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIG 136
            +VILNVY+L+      + +++VG+G +HTGVE+ GVEY++  N      GVF     TPL   G +   KES +MG  +    ++H I++  +++F A  Y + ++NCNH+S+A C +L+   +P+++NR +RIG
Sbjct:   14 EVILNVYDLSPPSFQNNLLKQVGIGFYHTGVEINGVEYSYGGNFTHSGTGVF---SSTPLNVDGAIY--KESFLMGT-IKDQRKLHQILDCAKDQFKANQYDLIKQNCNHFSEAFCLQLLNKRIPSYINRASRIG 142          
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|449441874|ref|XP_004138707.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus] >gi|700207865|gb|KGN62984.1| hypothetical protein Csa_2G382570 [Cucumis sativus])

HSP 1 Score: 108.612 bits (270), Expect = 7.148e-26
Identity = 67/204 (32.84%), Postives = 105/204 (51.47%), Query Frame = 0
Query:    8 DVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTF-----AQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIG----SIFSFGGN----------KDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192
             V LNVY+LT   G   W+   GLG +H+GV+V GVEY F     A  G+F   PK      G   + ++SI++G    S  E+   + KL EE++   YH+  KNCNH+ + +C RL G  +P WVNR AR+G     +   G N          +++ K+K RT+    ++  ++ AA     L+  + +  + +R+TS  +
Sbjct:   18 PVYLNVYDLTPINGYAYWL---GLGVYHSGVQVHGVEYAFGAHEHASTGIFEVEPKH---CPG--FTYRKSILIGRTNLSPREIRSFMEKLAEEYSGNTYHLITKNCNHFCNDVCIRLTGKPIPRWVNRLARLGFLCNCVLPVGLNEMKVGEVKADQNREKKKLRTQSSRYQSGLKSGAAATPTPLSSSKASN-SVVRKTSKQT 212          
The following BLAST results are available for this feature:
BLAST of EWM29209.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553193628|ref|XP_005855809.1|4.406e-140100.00hypothetical protein NGA_0588500 [Nannochloropsis ... [more]
gi|585111728|gb|EWM29208.1|1.998e-10899.35protein of unknown function DUF862, eukaryotic [Na... [more]
gi|299116898|emb|CBN75008.1|2.021e-3639.06conserved unknown protein [Ectocarpus siliculosus][more]
gi|669140320|ref|XP_008605728.1|9.530e-2943.26hypothetical protein SDRG_01949 [Saprolegnia dicli... [more]
gi|813225908|ref|XP_012212031.1|1.418e-2836.06hypothetical protein SPRG_17305 [Saprolegnia paras... [more]
gi|813134393|ref|XP_012198138.1|3.008e-2835.58hypothetical protein SPRG_04142 [Saprolegnia paras... [more]
gi|902145781|gb|KNA05002.1|5.561e-2836.70hypothetical protein SOVF_194450 [Spinacia olerace... [more]
gi|731316816|ref|XP_010665872.1|1.719e-2636.17PREDICTED: deSI-like protein At4g17486 [Beta vulga... [more]
gi|403342718|gb|EJY70683.1|2.508e-2637.78PPPDE putative thiol peptidase family protein (mac... [more]
gi|449441874|ref|XP_004138707.1|7.148e-2632.84PREDICTED: deSI-like protein At4g17486 [Cucumis sa... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1567rna1567Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications