EWM29209.1, cds1563 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|553193628|ref|XP_005855809.1| (hypothetical protein NGA_0588500 [Nannochloropsis gaditana CCMP526] >gi|422293256|gb|EKU20556.1| hypothetical protein NGA_0588500 [Nannochloropsis gaditana CCMP526] >gi|585111729|gb|EWM29209.1| protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 397.127 bits (1019), Expect = 4.406e-140 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query: 1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192
MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS
Sbjct: 1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|585111728|gb|EWM29208.1| (protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 316.235 bits (809), Expect = 1.998e-108 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 39 EVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192
+VGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS
Sbjct: 9 KVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 162
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|299116898|emb|CBN75008.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 134.806 bits (338), Expect = 2.021e-36 Identity = 75/192 (39.06%), Postives = 113/192 (58.85%), Query Frame = 0
Query: 3 ASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREE-FAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKA--KEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSS 191
+S R V LNVY+L + + SW++ +GLGA+H+G+E+GGVEYTF++ GV H P+ +G VS K + V+G+ +G+ +V I+N L+ E FA G Y V R NCNH+ D L L G +P WVNR A I + G +K + +K ++ A ++ +KELTQ Q++ L+ +R SS
Sbjct: 2 SSGVRPVQLNVYDLHE---SNSWLQHIGLGAYHSGLEIGGVEYTFSEAGVAQHPPRQ---IAGDGVSFKTTEVLGDFIGTMPDVRRILNGLKAEGFAEGEYDVIRNNCNHFCDELAFALTGKRIPPWVNRAATIATWAGLGESKKEGANDKKGGAGTAASSATASAPPSRDRKELTQKQRDLLSKMRTNKSS 187
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|669140320|ref|XP_008605728.1| (hypothetical protein SDRG_01949 [Saprolegnia diclina VS20] >gi|530742642|gb|EQC40884.1| hypothetical protein SDRG_01949 [Saprolegnia diclina VS20]) HSP 1 Score: 115.161 bits (287), Expect = 9.530e-29 Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 0
Query: 1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS 140
MA + VILNVY+L D ++ +GLGA+H+GV++ G EY+FA G+F PK A G V +ESI MG GS+N+ ++++LR EF Y++ KNCN +S+ LC RL+G +PA+VNR A +GS S
Sbjct: 1 MAKKGKTAVILNVYDLMDAN---AYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLLGVPIPAYVNRMAYLGSFLS 133
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|813225908|ref|XP_012212031.1| (hypothetical protein SPRG_17305 [Saprolegnia parasitica CBS 223.65] >gi|641521779|gb|KDO17263.1| hypothetical protein SPRG_17305 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 114.775 bits (286), Expect = 1.418e-28 Identity = 75/208 (36.06%), Postives = 109/208 (52.40%), Query Frame = 0
Query: 1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS------FGGNKDKAKEKTRT--------------EKVSARTKAENAAAKKKKELTQDQKNRLAAIRR 187
MA + VILNVY+L + ++ +GLGA+H+GV++ G EY+FA G+F PK A G V +ESI MG GS+N+ ++++LR EF Y++ KNCN +S+ LC RLVG +PA+VNR A +GS S G + T T +S R A + + E+ + +K RLAA+RR
Sbjct: 1 MAKKGKTAVILNVYDLVEAN---AYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLVGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPVEADSTPTAANNPRASYTSFGGSGISLRGTAPSTDTDEDMEVRR-EKRRLAAMRR 199
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|813134393|ref|XP_012198138.1| (hypothetical protein SPRG_04142 [Saprolegnia parasitica CBS 223.65] >gi|641537091|gb|KDO30954.1| hypothetical protein SPRG_04142 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 114.005 bits (284), Expect = 3.008e-28 Identity = 74/208 (35.58%), Postives = 109/208 (52.40%), Query Frame = 0
Query: 1 MAASSRRDVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS------FGGNKDKAKEKTRTEK--------------VSARTKAENAAAKKKKELTQDQKNRLAAIRR 187
MA + VILNVY+L + ++ +GLGA+H+GV++ G EY+FA G+F PK A G V +ESI MG GS+N+ ++++LR EF Y++ KNCN +S+ LC RL+G +PA+VNR A +GS S G + T T +S R A + + E+ + +K RLAA+RR
Sbjct: 1 MAKKGKTAVILNVYDLMEAN---AYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLLGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPVEADSTPTTANTPRASYTSFGGSGISLRGTAPSTDTDEDMEVRR-EKRRLAAMRR 199
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|902145781|gb|KNA05002.1| (hypothetical protein SOVF_194450 [Spinacia oleracea]) HSP 1 Score: 114.005 bits (284), Expect = 5.561e-28 Identity = 69/188 (36.70%), Postives = 99/188 (52.66%), Query Frame = 0
Query: 9 VILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTF-----AQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSS 191
V LNVY+LT G W+ GLG +H+GV+V G+EY F A GVF PK G + ++SI++G A EV ++ KL +E+ YH+ KNCNH+ + LC RL G +P+WVNR AR+G + A ++ + + A +KA + KKK + Q NR TSS+
Sbjct: 17 VYLNVYDLTPINGYAYWL---GLGVYHSGVQVHGIEYAFGAHDHATTGVFEVEPKQ---CPG--FTFRKSILIGRTDLGAKEVRALMEKLSKEYFGNTYHLISKNCNHFCNDLCIRLTGRPIPSWVNRLARLGLLCK--CVLPAALDEAKVRHIRAESKARSEVDKKK---LRSQSNRFEPSNSTSST 191
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|731316816|ref|XP_010665872.1| (PREDICTED: deSI-like protein At4g17486 [Beta vulgaris subsp. vulgaris] >gi|870868151|gb|KMT19020.1| hypothetical protein BVRB_2g031160 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 110.153 bits (274), Expect = 1.719e-26 Identity = 68/188 (36.17%), Postives = 97/188 (51.60%), Query Frame = 0
Query: 9 VILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTF-----AQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSS 191
V LNVY+LT G W+ GLG +H+GV+V GVEY F A GVF PK G + ++SI++G A EV ++ KL +E+ YH+ KNCNH+ + LC RL G +P+WVNR AR+G + A ++T+ + A K + KK + Q +R TSS+
Sbjct: 17 VYLNVYDLTPINGYAYWL---GLGVYHSGVQVHGVEYAFGAHDNATTGVFEVEPKQ---CPG--FTFRKSILIGRTDLGAKEVRALMEKLSKEYFGNTYHLISKNCNHFCNDLCIRLSGKPIPSWVNRLARLGLLCK--CVLPAALDETKVRHIRAENKVRDVDKKK----LRSQSSRFEPSNSTSST 190
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|403342718|gb|EJY70683.1| (PPPDE putative thiol peptidase family protein (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 109.383 bits (272), Expect = 2.508e-26 Identity = 51/135 (37.78%), Postives = 85/135 (62.96%), Query Frame = 0
Query: 8 DVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTFAQN------GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIG 136
+VILNVY+L+ + +++VG+G +HTGVE+ GVEY++ N GVF TPL G + KES +MG + ++H I++ +++F A Y + ++NCNH+S+A C +L+ +P+++NR +RIG
Sbjct: 14 EVILNVYDLSPPSFQNNLLKQVGIGFYHTGVEINGVEYSYGGNFTHSGTGVF---SSTPLNVDGAIY--KESFLMGT-IKDQRKLHQILDCAKDQFKANQYDLIKQNCNHFSEAFCLQLLNKRIPSYINRASRIG 142
BLAST of EWM29209.1 vs. NCBI_GenBank
Match: gi|449441874|ref|XP_004138707.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus] >gi|700207865|gb|KGN62984.1| hypothetical protein Csa_2G382570 [Cucumis sativus]) HSP 1 Score: 108.612 bits (270), Expect = 7.148e-26 Identity = 67/204 (32.84%), Postives = 105/204 (51.47%), Query Frame = 0
Query: 8 DVILNVYELTDEQGTGSWMRRVGLGAWHTGVEVGGVEYTF-----AQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIG----SIFSFGGN----------KDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192
V LNVY+LT G W+ GLG +H+GV+V GVEY F A G+F PK G + ++SI++G S E+ + KL EE++ YH+ KNCNH+ + +C RL G +P WVNR AR+G + G N +++ K+K RT+ ++ ++ AA L+ + + + +R+TS +
Sbjct: 18 PVYLNVYDLTPINGYAYWL---GLGVYHSGVQVHGVEYAFGAHEHASTGIFEVEPKH---CPG--FTYRKSILIGRTNLSPREIRSFMEKLAEEYSGNTYHLITKNCNHFCNDVCIRLTGKPIPRWVNRLARLGFLCNCVLPVGLNEMKVGEVKADQNREKKKLRTQSSRYQSGLKSGAAATPTPLSSSKASN-SVVRKTSKQT 212 The following BLAST results are available for this feature:
BLAST of EWM29209.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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