EWM29208.1, cds1562 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|585111728|gb|EWM29208.1| (protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 334.724 bits (857), Expect = 3.027e-116 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MVIICIETKVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 162
MVIICIETKVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS
Sbjct: 1 MVIICIETKVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 162
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|553193628|ref|XP_005855809.1| (hypothetical protein NGA_0588500 [Nannochloropsis gaditana CCMP526] >gi|422293256|gb|EKU20556.1| hypothetical protein NGA_0588500 [Nannochloropsis gaditana CCMP526] >gi|585111729|gb|EWM29209.1| protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 316.235 bits (809), Expect = 1.686e-108 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 9 KVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 162
+VGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS
Sbjct: 39 EVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSSS 192
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|299116898|emb|CBN75008.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 101.679 bits (252), Expect = 6.335e-24 Identity = 58/156 (37.18%), Postives = 87/156 (55.77%), Query Frame = 0
Query: 9 KVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREE-FAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKA--KEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSS 161
++GGVEYTF++ GV H P+ +G VS K + V+G+ +G+ +V I+N L+ E FA G Y V R NCNH+ D L L G +P WVNR A I + G +K + +K ++ A ++ +KELTQ Q++ L+ +R SS
Sbjct: 35 EIGGVEYTFSEAGVAQHPPRQ---IAGDGVSFKTTEVLGDFIGTMPDVRRILNGLKAEGFAEGEYDVIRNNCNHFCDELAFALTGKRIPPWVNRAATIATWAGLGESKKEGANDKKGGAGTAASSATASAPPSRDRKELTQKQRDLLSKMRTNKSS 187
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|813225908|ref|XP_012212031.1| (hypothetical protein SPRG_17305 [Saprolegnia parasitica CBS 223.65] >gi|641521779|gb|KDO17263.1| hypothetical protein SPRG_17305 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 85.5001 bits (210), Expect = 1.175e-17 Identity = 59/170 (34.71%), Postives = 84/170 (49.41%), Query Frame = 0
Query: 9 KVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS------FGGNKDKAKEKTRT--------------EKVSARTKAENAAAKKKKELTQDQKNRLAAIRR 157
+ G EY+FA G+F PK A G V +ESI MG GS+N+ ++++LR EF Y++ KNCN +S+ LC RLVG +PA+VNR A +GS S G + T T +S R A + + E+ + +K RLAA+RR
Sbjct: 36 DIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLVGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPVEADSTPTAANNPRASYTSFGGSGISLRGTAPSTDTDEDMEVRR-EKRRLAAMRR 199
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|813134393|ref|XP_012198138.1| (hypothetical protein SPRG_04142 [Saprolegnia parasitica CBS 223.65] >gi|641537091|gb|KDO30954.1| hypothetical protein SPRG_04142 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 84.7297 bits (208), Expect = 2.268e-17 Identity = 58/170 (34.12%), Postives = 84/170 (49.41%), Query Frame = 0
Query: 9 KVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS------FGGNKDKAKEKTRT--------------EKVSARTKAENAAAKKKKELTQDQKNRLAAIRR 157
+ G EY+FA G+F PK A G V +ESI MG GS+N+ ++++LR EF Y++ KNCN +S+ LC RL+G +PA+VNR A +GS S G + T T +S R A + + E+ + +K RLAA+RR
Sbjct: 36 DIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLLGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPVEADSTPTTANTPRASYTSFGGSGISLRGTAPSTDTDEDMEVRR-EKRRLAAMRR 199
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|669140320|ref|XP_008605728.1| (hypothetical protein SDRG_01949 [Saprolegnia diclina VS20] >gi|530742642|gb|EQC40884.1| hypothetical protein SDRG_01949 [Saprolegnia diclina VS20]) HSP 1 Score: 83.5741 bits (205), Expect = 5.823e-17 Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 9 KVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS 110
+ G EY+FA G+F PK A G V +ESI MG GS+N+ ++++LR EF Y++ KNCN +S+ LC RL+G +PA+VNR A +GS S
Sbjct: 36 DIAGDEYSFAGGAGIFTCRPKQ---ADGAV--FRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLLGVPIPAYVNRMAYLGSFLS 133
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|676386253|ref|XP_009036405.1| (hypothetical protein AURANDRAFT_15620, partial [Aureococcus anophagefferens] >gi|323453436|gb|EGB09308.1| hypothetical protein AURANDRAFT_15620, partial [Aureococcus anophagefferens]) HSP 1 Score: 81.2629 bits (199), Expect = 7.213e-17 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 0
Query: 9 KVGGVEYTFAQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIG 106
++ G EY+F GVF P+ + L ES+ +G HVGS N+ +G++N LR F G+Y +T +NCNH+SDA + L +PA VNR A G
Sbjct: 32 EINGSEYSFNDGGVFKAPPQACSRGAAPQCVLVESLHLGAHVGSVNDFNGVLNDLRRAFPPGSYALTSRNCNHFSDAFVRALGLGGIPARVNRAASYG 129
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|902145781|gb|KNA05002.1| (hypothetical protein SOVF_194450 [Spinacia oleracea]) HSP 1 Score: 83.5741 bits (205), Expect = 8.828e-17 Identity = 54/158 (34.18%), Postives = 80/158 (50.63%), Query Frame = 0
Query: 9 KVGGVEYTF-----AQNGVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFSFGGNKDKAKEKTRTEKVSARTKAENAAAKKKKELTQDQKNRLAAIRRTSSS 161
+V G+EY F A GVF PK G + ++SI++G A EV ++ KL +E+ YH+ KNCNH+ + LC RL G +P+WVNR AR+G + A ++ + + A +KA + KKK + Q NR TSS+
Sbjct: 44 QVHGIEYAFGAHDHATTGVFEVEPKQ---CPG--FTFRKSILIGRTDLGAKEVRALMEKLSKEYFGNTYHLISKNCNHFCNDLCIRLTGRPIPSWVNRLARLGLLCK--CVLPAALDEAKVRHIRAESKARSEVDKKK---LRSQSNRFEPSNSTSST 191
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|551634367|ref|XP_005820028.1| (hypothetical protein GUITHDRAFT_81819 [Guillardia theta CCMP2712] >gi|428164004|gb|EKX33048.1| hypothetical protein GUITHDRAFT_81819 [Guillardia theta CCMP2712]) HSP 1 Score: 80.4925 bits (197), Expect = 2.276e-16 Identity = 47/109 (43.12%), Postives = 60/109 (55.05%), Query Frame = 0
Query: 9 KVGGVEYTFAQN-----GVFFHVPKTPLVASGQVVS--LKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS 110
+V VE+TFA N G+ H PK QV S + SI MGE S++E+ + L + F YH KNCNH+SDA CQ LVG +P W+NR A +GS FS
Sbjct: 32 EVNSVEHTFAGNESSSSGIVRHPPK-------QVPSARFRISIDMGETNKSSSEIEAELAFLGQHFQGNTYHPVMKNCNHFSDAFCQALVGKRIPGWINRLANMGSCFS 133
BLAST of EWM29208.1 vs. NCBI_GenBank
Match: gi|698776804|ref|XP_009821446.1| (hypothetical protein H257_00444 [Aphanomyces astaci] >gi|574123571|gb|ETV89046.1| hypothetical protein H257_00444 [Aphanomyces astaci]) HSP 1 Score: 82.4185 bits (202), Expect = 2.306e-16 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 0
Query: 9 KVGGVEYTFAQN-GVFFHVPKTPLVASGQVVSLKESIVMGEHVGSANEVHGIINKLREEFAAGAYHVTRKNCNHYSDALCQRLVGASVPAWVNRPARIGSIFS 110
+VGGVEY+FA G+F PK S Q +ESI MG G+ ++ I++ +R EF Y++ KNCN +S+ C RLVG +P ++NR A GS FS
Sbjct: 41 EVGGVEYSFAGGAGIFTLAPK-----SAQGAVFRESIDMGSFEGTYHDAKRILDDMRSEFHGSQYNLLTKNCNTFSNEACLRLVGQPIPPFINRIAYFGSCFS 138 The following BLAST results are available for this feature:
BLAST of EWM29208.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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