EWM29190.1, cds1557 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|585111710|gb|EWM29190.1| (atp synthase mitochondrial f1 complex assembly factor 2 [Nannochloropsis gaditana]) HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0 Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0
Query: 1 MSTVPRASLRFTRTLRGPGQRQIRGRNSTPRSQSRHALTYHSSLTAGIASWGPVVRHAASLAPLACNGLPRSSACRCSFSSTSTQDVPPLPHMGGRPSDEEMAAEDAAAAAEMEESHMKDGLAIKMATSSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEEEAGDSKELGKNAGVMPHVELKARVKARLKKEFPDSTPE 418
MSTVPRASLRFTRTLRGPGQRQIRGRNSTPRSQSRHALTYHSSLTAGIASWGPVVRHAASLAPLACNGLPRSSACRCSFSSTSTQDVPPLPHMGGRPSDEEMAAEDAAAAAEMEESHMKDGLAIKMATSSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEEEAGDSKELGKNAGVMPHVELKARVKARLKKEFPDSTPE
Sbjct: 1 MSTVPRASLRFTRTLRGPGQRQIRGRNSTPRSQSRHALTYHSSLTAGIASWGPVVRHAASLAPLACNGLPRSSACRCSFSSTSTQDVPPLPHMGGRPSDEEMAAEDAAAAAEMEESHMKDGLAIKMATSSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEEEAGDSKELGKNAGVMPHVELKARVKARLKKEFPDSTPE 418
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|673038054|ref|XP_008872988.1| (hypothetical protein H310_08857 [Aphanomyces invadans] >gi|574471105|gb|ETV98113.1| hypothetical protein H310_08857 [Aphanomyces invadans]) HSP 1 Score: 170.629 bits (431), Expect = 1.612e-46 Identity = 105/273 (38.46%), Postives = 150/273 (54.95%), Query Frame = 0
Query: 108 AAAAEMEESHMKDGLAIKMATSSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHE 379
+AAAE + G K+A GR RFYK VG+ D Y +TLDG ++TP + +LPT+ LA AVA EWD Q ++ ++PT MP+ +A+ ALD F I+ ++YL TDT+C FP E + KL RQ+K W+PL W EFG + ++ +SP ++ VR + MD F L AF +V + KS++ ALAL+ RH+T +EA + LEE +Q WG V+ H+L+ +AS FLWLL+E
Sbjct: 21 SAAAETPRGGVSSGSGAKIA-----GRSRFYKAVGIEAEGDG-------YCITLDGKKVRTP-SRSLLQLPTKSLAAAVAKEWDAQ--HETIQPTTMPIMTLASTALDHWDFD--FIIEEIMKYLQTDTIC--FPVESQHQEKLAARQEKKWQPLRKWFETEFGGELDINYGTINKLEHSPVAVENVRAFVYSMDKFELMAFRLIVRECKSMVVALALLKRHITAKEAIELGRLEEEYQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLNE 274
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|298707299|emb|CBJ25926.1| (similar to ATP synthase mitochondrial F1 complex assembly factor 2 [Ectocarpus siliculosus]) HSP 1 Score: 169.474 bits (428), Expect = 3.182e-45 Identity = 95/257 (36.96%), Postives = 142/257 (55.25%), Query Frame = 0
Query: 131 FTGRRRFYKTVGVRPSL-DPSGRQVH----------HYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWL 376
GR RFYKTV +R + D +G + +E+ LD LKTPG + + + LA+AVA EWD Q T KG+EP MPL +A+ ALD++ R T+ CL+YL TDTVC+ P+ D + RRQ++ W PL W + G+ + + + PE L + R +L+ +D + LAA S ++ KS++ ALAL+FR TVE+A A+ LEE + WG ++ H+++ AAS+ +WL
Sbjct: 87 IKGRSRFYKTVTIREIVADKAGDEASAAAAVGDKSPRWEILLDSRVLKTPG-RRPLQFDSPELAMAVAAEWDAQDTSKGIEPAVMPLMALASTALDQVASDREKTVATCLKYLPTDTVCFLSPDP--DPVIARRQRQLWSPLRDWTEEALGIPVATTTEIHRTPQHPPEALARARDLLESLDEWGLAAVQSATMECKSLVIALALLFRKTTVEKAFDAARLEEEYNVERWGMIEGGHDMDRANTTLTLTAASTLIWL 340
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|669141930|ref|XP_008606527.1| (hypothetical protein SDRG_02708 [Saprolegnia diclina VS20] >gi|530741811|gb|EQC40053.1| hypothetical protein SDRG_02708 [Saprolegnia diclina VS20]) HSP 1 Score: 162.925 bits (411), Expect = 7.754e-44 Identity = 97/255 (38.04%), Postives = 138/255 (54.12%), Query Frame = 0
Query: 129 SSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEEEA 382
+ GR RFYK VGV+ + G + VTLDG ++TP +LPT+ LA AVA+EWD Q + ++P+ MP+ +A +LD + +D ++YL TDT+C FP E+ KL RQ+K W L W +EF + + V ++P + VR LQ+MD F + AF +V +LKS+ ALAL RH+T +EA + LEE Q WG V+ H+L+ +AS FLWLL E A
Sbjct: 17 AKIAGRSRFYKEVGVQAQDEADG---GGFCVTLDGKKVRTPA-RSLLQLPTKSLAAAVAMEWDAQ--KESIQPSTMPMMSLAATSLD--FWELDIIVDELMKYLQTDTIC--FPVEKTHQEKLATRQEKKWGTLRKWFEEEFDGELDVNHGTITVLQHNPTAVANVRAYLQQMDNFEIMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKERSA 261
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|813170659|ref|XP_012204085.1| (hypothetical protein SPRG_09500 [Saprolegnia parasitica CBS 223.65] >gi|641531163|gb|KDO25252.1| hypothetical protein SPRG_09500 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 162.925 bits (411), Expect = 1.077e-43 Identity = 97/255 (38.04%), Postives = 138/255 (54.12%), Query Frame = 0
Query: 129 SSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEEEA 382
+ GR RFYK VGV+ + G + VTLDG ++TP +LPT+ LA AVA+EWD Q + ++P+ MP+ +A +LD + +D ++YL TDT+C FP E+ KL RQ+K W L W +EF + + V ++P + VR LQ+MD F + AF +V +LKS+ ALAL RH+T +EA + LEE Q WG V+ H+L+ +AS FLWLL E A
Sbjct: 27 AKIAGRSRFYKEVGVQAQDEADG---GGFCVTLDGKKVRTPA-RSLLQLPTKSLAAAVAMEWDAQ--KESIQPSTMPMMSLAATSLD--FWELDIIVDELMKYLQTDTIC--FPVEKTHQEKLATRQEKKWGTLRKWFEEEFDGELDVNHGTITVLQHNPTAVANVRAYLQQMDNFEIMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKERSA 271
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|1173935739|gb|OQR86812.1| (hypothetical protein ACHHYP_20446 [Achlya hypogyna]) HSP 1 Score: 157.147 bits (396), Expect = 1.561e-41 Identity = 96/250 (38.40%), Postives = 134/250 (53.60%), Query Frame = 0
Query: 129 SSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLL 377
+ GR RFYK V V + D G + VTLDG ++TP +LPT+ LA AVALEWD Q + ++P+ MP+ +A +LD + ID ++YL TDT+C FP E+ KL RQ+K W L W +EF + + ++P + VR L++MD F L AF +V +LKS+ ALAL RH+T +EA + LEE Q WG V+ H+L+ +AS FLWLL
Sbjct: 25 AKIAGRSRFYKEVAVAAAEDGQG-----FCVTLDGKKVRTPA-RSLLQLPTKSLASAVALEWDAQ--KETIQPSTMPMMSLAATSLD--FWELGLIIDELMKYLQTDTIC--FPVEKTHQEKLATRQEKKWGALRKWFEEEFDGELDVNHGTITALQHNPTAVANVRAYLEQMDNFELMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLL 262
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|698818867|ref|XP_009842462.1| (hypothetical protein H257_15893 [Aphanomyces astaci] >gi|698818869|ref|XP_009842463.1| hypothetical protein, variant [Aphanomyces astaci] >gi|574102613|gb|ETV68163.1| hypothetical protein H257_15893 [Aphanomyces astaci] >gi|574102614|gb|ETV68164.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 157.532 bits (397), Expect = 1.859e-41 Identity = 94/252 (37.30%), Postives = 134/252 (53.17%), Query Frame = 0
Query: 129 SSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHE 379
+ GR RFYK VG+ D Y +TLDG ++TP + +LPT+ LA VA+EWD Q + ++PT MP+ +A+ ALD F I+ ++YL TDT+C FP E + KL RQ+K W+PL W EFG + + + + VR + +D F L AF +V + KS++ ALAL RH+T +EA + LEE +Q WG V+ H+L+ +AS FLWLL E
Sbjct: 40 AKIAGRSRFYKAVGIEAEGDG-------YCITLDGKKVRTP-SRSLLQLPTKALAATVAMEWDAQ--REVIQPTTMPIMTLASTALDHWDF--EFIIEELMKYLQTDTIC--FPVESQHQEKLATRQEKKWQPLRKWFETEFGGELDINYGTITKLQHDAVAVNNVRTFVDSLDHFELMAFRLIVRECKSMVVALALFKRHITAKEAIELGRLEEEYQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKE 277
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|675179737|ref|XP_008898753.1| (hypothetical protein PPTG_06557 [Phytophthora parasitica INRA-310] >gi|566008237|gb|ETI31148.1| hypothetical protein F443_21864 [Phytophthora parasitica P1569] >gi|567945719|gb|ETK71530.1| hypothetical protein L915_21257 [Phytophthora parasitica] >gi|567974379|gb|ETL24974.1| hypothetical protein L916_21124 [Phytophthora parasitica] >gi|568003848|gb|ETL78189.1| hypothetical protein L917_20982 [Phytophthora parasitica] >gi|568033758|gb|ETM31452.1| hypothetical protein L914_20999 [Phytophthora parasitica] >gi|568101738|gb|ETN16424.1| hypothetical protein PPTG_06557 [Phytophthora parasitica INRA-310] >gi|570311915|gb|ETO59863.1| hypothetical protein F444_21886 [Phytophthora parasitica P1976] >gi|570935710|gb|ETP00967.1| hypothetical protein F441_21746 [Phytophthora parasitica CJ01A1] >gi|570965984|gb|ETP29103.1| hypothetical protein F442_21724 [Phytophthora parasitica P10297] >gi|970644927|gb|KUF85574.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Phytophthora nicotianae]) HSP 1 Score: 147.902 bits (372), Expect = 6.663e-38 Identity = 94/255 (36.86%), Postives = 135/255 (52.94%), Query Frame = 0
Query: 131 FTGRRRFYKTVGVR----PSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEI-VFSRHSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEE 380
TG RFYK VGV+ P + Y VTLDG +KTP ++ RLPT +A AVA EWD Q + P MP+ +A+ ALD + S TID + YL TDTVCY ++ + KL+ QQK W+P+ W D F + +D + + + VR L++++ F L A +L + KS+ITALA+ RH+T +EA LEE Q WG V+ H+L+ + ++AS L+LL +
Sbjct: 33 ITGVLRFYKDVGVKDVEGPEKEAGEEPRKLYAVTLDGKTVKTP-RQQPVRLPTRAMAYAVAHEWDSQ--SHDIRPATMPIMTLASTALDLVYTSSSQETIDEMMHYLHTDTVCYQVTADQQE-KLVALQQKKWKPIRKWFSDLFEGEVDVSHGSIDRLAHDQQLVDNVRAHLEKLNDFELTAMRTLTKECKSLITALAVFKRHITAKEAMDICRLEEEFQINNWGLVEGGHDLDRVNCAVKLSSASFLLYLLENK 283
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|1173956777|gb|OQS03479.1| (hypothetical protein THRCLA_04219 [Thraustotheca clavata]) HSP 1 Score: 148.673 bits (374), Expect = 3.779e-35 Identity = 90/232 (38.79%), Postives = 129/232 (55.60%), Query Frame = 0
Query: 129 SSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELE 359
+ GR RFYK V V + +G Y VTLDG ++TP +LPT+ LA AVA+EWD Q + ++P+ MP+ +A +LD ++ I+ ++YL TDT+C FP E+ KL RQ+K W L W EF + + V ++P ++ VR LQ+MD F L AF +V +LKS+ ALALV RH+T +EA + LEE Q WG V+ H+L+
Sbjct: 766 AKIAGRSRFYKEVAVEGQNEENG---GGYCVTLDGKKVRTPA-RALLQLPTKSLASAVAMEWDAQ--KETIQPSTMPMMSLAATSLD--FWNLDIIIEELMKYLQTDTIC--FPVEKTHQEKLAARQEKKWGALRKWFEAEFDGELDVNHGTITVLQHNPTAVENVRSFLQQMDNFELMAFRCIVRELKSMTVALALVKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLD 987
BLAST of EWM29190.1 vs. NCBI_GenBank
Match: gi|953488799|emb|CEG47665.1| (atp synthase mitochondrial f1 complex assembly factor 2 [Plasmopara halstedii]) HSP 1 Score: 135.961 bits (341), Expect = 2.186e-33 Identity = 90/262 (34.35%), Postives = 136/262 (51.91%), Query Frame = 0
Query: 126 MATSSFTGRRRFYKTVGVR----PSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEI-VFSRHSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFT--LAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEE 380
+A TG RFYK V V+ P+++ Y VTLDG +KTP ++ LPT +A +VA EWD Q+ + P MP+ +A+ ALD + S TID + YL TDT+CY ++ + KL+ QQK W+P+ W D F + +D + + L VR L+ + + +L + KS+ITALA+ RH+T +EA S LEE Q + WG V+ H+L+ + ++AS L+LL +
Sbjct: 29 IAGPKITGVLRFYKDVDVKEIPEPTVEDGVEPRKLYAVTLDGKTIKTP-RQQPVHLPTPAMAYSVAHEWDAQI--HDIRPATMPIMTLASTALDLVYTSSSQETIDEMMHYLNTDTICYEVTADKQE-KLVMLQQKKWKPIRKWFSDTFEGEVDVSYGSIDQLAHDQQLLTNVRAHLETVLHVIDIMKTVRTLTKECKSLITALAVFKRHITAKEAVDVSRLEEEFQISNWGLVEGGHDLDRVNCAMKVSSASFLLYLLENK 286 The following BLAST results are available for this feature:
BLAST of EWM29190.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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