EWM29117.1, cds1555 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|585111637|gb|EWM29117.1| (nucleotide sugar transporter family protein [Nannochloropsis gaditana]) HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0 Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0 Query: 1 MRGAAGWDDILQHRRADSLDLSCSPPPSLMITLTRLLSLATLPTITQMLDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEEIPDGEIGGAGRLELMGAMKV 393 MRGAAGWDDILQHRRADSLDLSCSPPPSLMITLTRLLSLATLPTITQMLDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEEIPDGEIGGAGRLELMGAMKV Sbjct: 1 MRGAAGWDDILQHRRADSLDLSCSPPPSLMITLTRLLSLATLPTITQMLDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEEIPDGEIGGAGRLELMGAMKV 393
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|585111636|gb|EWM29116.1| (nucleotide sugar transporter family protein [Nannochloropsis gaditana]) HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0 Query: 48 MLDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEEIPDGEIGGAGRLELMGAMKV 393 MLDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEEIPDGEIGGAGRLELMGAMKV Sbjct: 1 MLDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEEIPDGEIGGAGRLELMGAMKV 346
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|857970440|emb|CEP03463.1| (hypothetical protein PBRA_003221 [Plasmodiophora brassicae]) HSP 1 Score: 299.671 bits (766), Expect = 2.705e-96 Identity = 154/282 (54.61%), Postives = 203/282 (71.99%), Query Frame = 0 Query: 59 GNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMS 340 N+ S VG+VI NK++ + FNF+ LSF HFV T L LL FF YKPAP+ GV+PVA+G+LGSVAFMNLNLA NSVGFYQ+SKLACIP T+ L+ + K V +L+ I +GVGI+TV DV+VN +G A+A +AV FT+L QI+T + Q+QL D++QLL+HSSP+IA G F+ I FD+V L+Q + S + + +CVLA+GVN+SNYLV+GKTSP+TYQV+GH KT L+LVLGF+ F R++ GI+IA+ GVI Y E+KR S Sbjct: 13 ANIASSVGIVITNKFVWSAHGFNFVATLSFLHFVTTALATRTLLAARFFEYKPAPLAGVMPVAIGTLGSVAFMNLNLAANSVGFYQISKLACIPATLILQYLLFKKQVSEKTRYSLLVILLGVGISTVTDVNVNFIGMAYALIAVAFTALGQIYTGSSQQQLGLDSMQLLHHSSPIIAVGMFVCIFLFDDVGALLQFEYTSSAVFLIALTCVLAVGVNVSNYLVIGKTSPITYQVVGHSKTCLVLVLGFLAFSTPVTLRSIAGIVIAMAGVIWYGEVKRVES 294
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|955163301|emb|CUG92987.1| (triose phosphate transporter, putative [Bodo saltans]) HSP 1 Score: 209.149 bits (531), Expect = 4.457e-61 Identity = 121/304 (39.80%), Postives = 177/304 (58.22%), Query Frame = 0 Query: 55 FAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRR 358 F +F N S +G+V+ NK + V F + L+F HFV TYLG V LG F K + +LP+ L G VA N++L +NSVGFYQL K+ P+ ++ FY T PV +L I +GV IATV D N+VGT A A+L T++ QI+ T QK+L+C++ QLLY +P+ AA +IP DN+ L + + +++ +L S +LA VN+S +LV+G TSP+TY VLGH K +ILVLGF+VF + V GI++ + GV+ YT LK+ + + + + R+ Sbjct: 19 FYLFLNAASSIGIVVTNKLVFQVYNFKYGTLLTFIHFVITYLGLEVCRRLGVFEKKSVDLWKILPLCLSFCGFVALTNISLVYNSVGFYQLMKVLTTPLIAFIQTFFYNTTFTTPVKASLTIICVGVAIATVTDTDANMVGTLVATSALLVTAMYQIWVGTKQKELECNSYQLLYLQAPISAAILIPLIPLLDNLSTLTEIPSNETIV-AILVSSILAFLVNLSIFLVIGSTSPITYNVLGHFKLTVILVLGFLVFGAPLTPQNVTGIVVTISGVVWYTHLKQNEKKPEPEKKTLEETGDQSRK 321
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|955179341|emb|CUF15972.1| (transmembrane protein, putative [Bodo saltans]) HSP 1 Score: 207.223 bits (526), Expect = 1.969e-60 Identity = 113/279 (40.50%), Postives = 168/279 (60.22%), Query Frame = 0 Query: 60 NVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRR 338 N S +G+V NK + V F + L+F HF+FT++G + G F K ++ +LP+ + G VA NL+L +NSVGFYQL K+ P+ + ++ FY +T P + ++L +GV IATV D NL+GT A A+L T + QI+ T QK+L+C++ QLLY +P+ A +IP D++ L + S ++ ++SS +LA VNIS +LV+GKTSP+TY VLGH K +IL LGFVVF + R + G+L+ L GV YT +K + Sbjct: 26 NACSSIGIVFSNKVVFQVYNFKYGTLLTFIHFIFTFVGLEICRQCGMFELKRIDLKKILPLCVSFCGFVALTNLSLVYNSVGFYQLMKVLTTPIIVVIQTLFYNETFPTNIKLSLALTCVGVAIATVTDSEANLIGTLVAISALLVTCMYQIWVGTKQKELECNSYQLLYWQAPISAVILVPIIPLLDDLSTLSEWPNSDAVTAIIISS-LLAFLVNISIFLVIGKTSPVTYNVLGHFKLTIILTLGFVVFNAHVDYRNIAGVLVTLSGVFWYTHIKTQ 303
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|1001617922|gb|KXS21661.1| (TPT-domain-containing protein [Gonapodya prolifera JEL478]) HSP 1 Score: 200.29 bits (508), Expect = 4.899e-58 Identity = 110/284 (38.73%), Postives = 172/284 (60.56%), Query Frame = 0 Query: 57 MFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMS 340 M NV S VG+V+ NK++ V FNF L+ HFV T +G +L +G+F+ K + ++ G V NL+L +NSVGFYQ +K+ PV + ++ FYG T+ + ++L+ + IGV IAT+ DV +NL+G A VL TSL QI+ T QK+L+ DALQLL++ +P+ A ++ PFFD++ L ++ + + + + VN+S Y ++G+TSPLTY V+GH KT+ +++LGF++F Y + V GIL+ + G+I YT +K S Sbjct: 1 MVTNVVSSVGIVLTNKWVFKVHKFNFGTLLTVIHFVTTSVGLELLARMGYFHRKYVAPSRIFLLSSAFCGFVVLTNLSLQYNSVGFYQCAKVLTTPVVVGIQTLFYGITISNRLKLSLLLVLIGVAIATITDVELNLLGFLIAMAGVLVTSLYQIWVGTKQKELELDALQLLHNQAPISALSLLILFPFFDDLEALKAYELTAPAIRDIAITAAFSFFVNVSIYGIIGRTSPLTYNVVGHFKTVTVVILGFILFSYPVMFKNVSGILLTIAGIIWYTLIKLEES 284
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|661889511|emb|CDP07098.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 197.593 bits (501), Expect = 2.146e-56 Identity = 124/328 (37.80%), Postives = 185/328 (56.40%), Query Frame = 0 Query: 56 AMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNV---RYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYT-----ELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEEIP 375 A+F +V S V +VI+NK +++ F F L+ H + TY V L + FF KP ++ V+ + + S+ F+NL+L NS+GFYQ++KLA IP T+ LE F K + +L + IGVGIA++ D+ +N VGT + LA++ T + QI T+T QK+L+ + QLLY S+P AA F+ P D + + S +L +L SC++A+ VN S +LV+GKTSP+TYQVLGHLKT L+L G+ + +R + GILIA+ G+ Y+ E K++ Q G + MS + F DEE P Sbjct: 14 ALFLSVASSVSIVIVNKALMSNLGFPFATTLTSWHLMVTYCTLHVALRMNFFENKPVDMKTVVLFGILNGVSIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFLKKHFSQKIKFSLFVLLIGVGIASITDLQLNFVGTVLSLLAIITTCVGQILTNTIQKRLNVSSTQLLYQSAPFQAAVLFVSGPLVDQCLTKQNVFAHKYSPIVLAFILLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTSRNIAGILIAIVGMGLYSYFCTHENKKK---QGGDFSSMSQNKDKDTTPFLANGKKMAHQDEENP 338
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|902205576|gb|KNA15203.1| (hypothetical protein SOVF_100440 [Spinacia oleracea]) HSP 1 Score: 195.282 bits (495), Expect = 1.565e-55 Identity = 118/317 (37.22%), Postives = 178/317 (56.15%), Query Frame = 0 Query: 71 NKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNV---RYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEEIP--DGEIGGA 382 NK +++ FNF L+ H + T+ V L + F +KP + VL + + S+ +NL+L NSVGFYQ++KLA IP T+ LE F+ K + +L + +GVGIATV D+ +N +G+ + LAV+ T +AQI T+T QK+ + QLLY SSP AA + PF D + + + + +L ++ SC++A+ VN S +LV+GKTSP+TYQVLGHLKT L+L G+++ + R ++GIL+ALGG+I Y+ R + ++ A S+V DE P E GGA Sbjct: 33 NKALISTLGFNFATTLTSWHLLVTFCSLHVALKMKLFEHKPFERKAVLGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVFLETVFFKKKFSRSIQSSLAVLLMGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSSPYQAATLLVSGPFLDKLLTSQDVFTFKYTTQVLMFIIVSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFSWRNILGILVALGGMILYSYYCTRETQKKASEAA---------------PLSQVKGDESDPLIKMESGGA 334
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|1109193535|ref|XP_019179468.1| (PREDICTED: uncharacterized membrane protein At1g06890-like [Ipomoea nil]) HSP 1 Score: 194.512 bits (493), Expect = 3.568e-55 Identity = 120/300 (40.00%), Postives = 179/300 (59.67%), Query Frame = 0 Query: 49 LDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSI-----SLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYT-----ELKRR 338 + + I A+F +V S V +VI NK +++ F F L+ H + TY V L L FF KP ++ V + + S+ F+NL+L NS+GFYQ++KLA IP T+ LE F K + ++L + IGVGIA+V D+ +N VGT + LA++ T + QI T+T QK+L+ A QLLY S+P +A F+ P D ++L S+ S +L + SC++A+ VN S +LV+GKTSP+TYQVLGHLKT L+L G+ + AR ++GIL+A+ G+ Y+ E KR+ Sbjct: 7 MQLGVIGALFLSVASSVSIVICNKALMSNLGFQFATTLTSWHLLVTYCTLHVALKLKFFENKPIDMKTVTLFGILNGVSIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFLNKQFSRNIKLSLGVLLIGVGIASVTDLQLNFVGTVLSLLAIITTCVGQILTNTIQKRLNISATQLLYQSAPFQSAILFVTGPLLD--QFLTNQSVFSYNYSPMVLGFIALSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLGFGYTLLHDPFTARNIIGILVAIVGMGLYSYFCTHETKRK 304
BLAST of EWM29117.1 vs. NCBI_GenBank
Match: gi|1109249670|ref|XP_019199592.1| (PREDICTED: uncharacterized membrane protein At1g06890-like [Ipomoea nil] >gi|1109249672|ref|XP_019199593.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Ipomoea nil] >gi|1109249674|ref|XP_019199594.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Ipomoea nil]) HSP 1 Score: 194.512 bits (493), Expect = 3.742e-55 Identity = 118/293 (40.27%), Postives = 178/293 (60.75%), Query Frame = 0 Query: 56 AMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSI-----SLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYT-----ELKRR 338 A+F +V S V +VI NK +++ F F L+ H + TY V L L FF KP + V+ + + S+ F+NL+L NS+GFYQ++KLA IP T+ LE F K V ++L + IGVGIA++ D+ +N VGT + LA++ T + QI T+T QK+L+ + QLLY S+P AA F+ P D ++L + ++ S +L ++ SC++A+ VN S +LV+GKTSP+TYQVLGHLKT L+L G+ + +R +VGIL+A+ G+ Y+ E KR+ Sbjct: 14 ALFLSVASSVSIVICNKALMSNLGFKFATTLTSWHLMVTYCTLHVALRLNFFENKPVDFKTVMLFGILNGVSIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFLKKQFSQNVKLSLFVLLIGVGIASITDLQLNFVGTILSILAIITTCVGQILTNTIQKRLNISSTQLLYQSAPFQAAVLFVTGPVVD--QFLTKQNVFAYKYSPIVLAFIVLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLGFGYTLLHDPFTSRNIVGILVAIVGMGLYSYFCTHESKRK 304 The following BLAST results are available for this feature:
BLAST of EWM29117.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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