EWM29134.1, cds1553 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|553196515|ref|XP_005856362.1| (transmembrane emp24 domain trafficking protein 2 [Nannochloropsis gaditana CCMP526] >gi|422292695|gb|EKU19997.1| transmembrane emp24 domain trafficking protein 2 [Nannochloropsis gaditana CCMP526] >gi|585111654|gb|EWM29134.1| transmembrane emp24 domain trafficking protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 446.047 bits (1146), Expect = 2.095e-158 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
Query: 1 MWRFLFWRSARIPSRSLLVVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRTDVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
MWRFLFWRSARIPSRSLLVVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRTDVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV
Sbjct: 1 MWRFLFWRSARIPSRSLLVVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRTDVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|443684502|gb|ELT88430.1| (hypothetical protein CAPTEDRAFT_18698 [Capitella teleta]) HSP 1 Score: 111.309 bits (277), Expect = 7.104e-27 Identity = 66/207 (31.88%), Postives = 111/207 (53.62%), Query Frame = 0
Query: 19 VVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSF----RTDVLVD-EAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
V+LS+L ++L K + ++ + + EC+ T G FEV GG + ++V + GPDGK ++ +S ++F A +G + C SN + P++V FS + V +D E+ A+ + +L E+ N L+ LT V Q YM RE +H + ++ SRV++W+ EA+VL+ M + Q+ + +FFEVRR V
Sbjct: 6 VILSVLACLMLFKASDAYFINIDANAEECFFDKVTSGTKMSLMFEVAEGG-FLDIDVKIVGPDGKNIYYGERESNGKYTFAAHMDGVYKYCFSN----QMSTMTPKIVMFSMDIGDKPKVDMDKESEAAHHN--KLEEMINELSTSLTGVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLIAMTLGQVYYLKRFFEVRRVV 205
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|291235572|ref|XP_002737711.1| (PREDICTED: transmembrane emp24 domain-containing protein 2-like isoform 2 [Saccoglossus kowalevskii]) HSP 1 Score: 110.153 bits (274), Expect = 1.786e-26 Identity = 63/206 (30.58%), Postives = 107/206 (51.94%), Query Frame = 0
Query: 16 SLLVVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRT-DVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
L+ V SLL++++ + P + + + EC+ T G FEV GG + ++V + GPDGK+++ +S ++F A +G + C SN + P++V FS D + +++ +L E+ N L LT V Q YM RE +H + ++ SRV++W+ E++VLV M + Q+ + +FFEVRR V
Sbjct: 3 QLIFVWSLLMVLVHIGPTEGYFMAIDAHADECFHDKVTSGTKMGLTFEVAEGG-FLDIDVKITGPDGKVIYSGERESNGKYTFAAHMDGVYKYCFSN----KMSTMTPKIVMFSMDVGDSPKGSDMDTDEHHNKLEEMVNELATALTGVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFESLVLVAMTLGQVYYLKRFFEVRRVV 203
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|675377693|gb|KFM70595.1| (Transmembrane emp24 domain-containing protein 2, partial [Stegodyphus mimosarum]) HSP 1 Score: 110.153 bits (274), Expect = 2.367e-26 Identity = 68/211 (32.23%), Postives = 104/211 (49.29%), Query Frame = 0
Query: 11 RIPSRSLLVVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRT-DVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
I S L V+ ++ L+ + L + V V EC+ T G FEV GG + ++V + GPDGK++++ +S ++F A +G +T C SN P++V FS + +E +L E+ L+ LT+V Q YM R+ +H + ES SRV++W EA VLV M V Q+ + +FFEVRR V
Sbjct: 2 NIISHKLSVLQTVFLVTVFLPFINCYFVNVDAHAEECFFDKVTAGTKMGLTFEVAEGG-FLDIDVKITGPDGKVIYQGERESNGKYTFAAHTDGVYTYCFSNAMSTMT----PKIVMFSMDIGEAPKGHDAEAEAHQNKLEEMIKELSTSLTSVKHEQEYMAVRDRIHRAINESTNSRVVLWAFFEAAVLVAMTVGQVYYLRRFFEVRRVV 207
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|576692328|gb|EUB55980.1| (Transmembrane emp24 domain-containing protein 2 [Echinococcus granulosus] >gi|674562096|emb|CDS23606.1| transmembrane emp24 domain containing protein [Echinococcus granulosus]) HSP 1 Score: 109.383 bits (272), Expect = 3.164e-26 Identity = 64/203 (31.53%), Postives = 106/203 (52.22%), Query Frame = 0
Query: 21 LSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRT---DVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
L++++L L + ++ V + +C+ A GD FEV GG Y + V + PDG L++ +S +SF A G +T C +N + P+ V F+ + +E IA EQS +LI++ N L+ + N Y+ RE+LH + E+ SRV++W EA+++VGM++ Q+ + +FFEVRR V
Sbjct: 4 LAVVVLSFLSCSSYAYFVTIDAYAEQCFFDRAKPGDRLTLFFEVSEGGFY-DINVKLTAPDGSTLYKIEKESSGHYSFTANTEGKYTYCFNN----KMSTVTPKTVLFALEKGSQKLGKEEGIAPEQS--KLIDMVNELSNAVLNAKHEMEYLEVRENLHRAINENTNSRVVMWAAFEAIIIVGMSLGQVYYLKRFFEVRRMV 199
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|675889146|ref|XP_009030075.1| (hypothetical protein HELRODRAFT_69964 [Helobdella robusta] >gi|555688075|gb|ESN91307.1| hypothetical protein HELRODRAFT_69964 [Helobdella robusta]) HSP 1 Score: 109.383 bits (272), Expect = 4.210e-26 Identity = 62/202 (30.69%), Postives = 102/202 (50.50%), Query Frame = 0
Query: 23 LLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSF----RTDVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
LIL+ + + + + ECY + G FEV GG + ++V + GPDGK ++ +S F+F A ++GD+ C SN + P++V F+ + V D +E + +L E+ + L+ L V Q YM RE +H + +S SRV++W+ EA+VLV M + Q+ + +FFEVRR +
Sbjct: 14 FFTLILVFEYVAGYYITIDAHAEECYFDRVSSGTKLSLMFEVAEGG-FLDIDVHITGPDGKQIYSGERESNGKFTFAAHQDGDYKYCFSN----KMSTMTPKVVMFTMEIGEKAKVDSDGNKDTETTQNKLEEMISELSSKLYGVKHEQEYMEVRERIHRAINDSTNSRVVLWSFFEALVLVAMTLGQVYYLKRFFEVRRVI 210
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|1069810703|ref|XP_018329110.1| (PREDICTED: transmembrane emp24 domain-containing protein 2-like [Agrilus planipennis] >gi|1069823900|ref|XP_018334679.1| PREDICTED: transmembrane emp24 domain-containing protein 2-like [Agrilus planipennis]) HSP 1 Score: 108.997 bits (271), Expect = 6.075e-26 Identity = 65/206 (31.55%), Postives = 106/206 (51.46%), Query Frame = 0
Query: 16 SLLVVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRT-DVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
+LL+VL ++ + + + V EC+ G FE+ GG + ++V + GPDGK++++ +S ++F A NG +T C SN + P++V F+ + + E E+S +L ++ L+ LT V Q YM+ R+ +H S ES SRV++W+ EAV+LV M QI + +FFEVRR V
Sbjct: 4 NLLIVL--FAYSSIINSVSCYYITVDADAEECFFDKVESGTKMSLTFEIAEGG-FLDIDVRIVGPDGKVIYQGERESSGKYTFAAHANGIYTYCFSN----KMSTMTPKVVMFNMQIGESAKHEENQGEESSTKLEDMIRELSGALTGVKQEQEYMQLRDRIHRSINESTNSRVVMWSFFEAVILVAMTFGQIYYLKRFFEVRRVV 202
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|906462796|gb|KNC24993.1| (hypothetical protein FF38_11825 [Lucilia cuprina]) HSP 1 Score: 108.612 bits (270), Expect = 8.426e-26 Identity = 70/211 (33.18%), Postives = 109/211 (51.66%), Query Frame = 0
Query: 14 SRSLLVVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRTDVLVDEAIAS--EQSI--RRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
R+LLV + L L+ LL+ A +F V V EC+ G F FEV+ GG + +++ V GPD ++ ++ +S +F A G +T+C N + P+LV FS A + E+ I +L ++ L+ LT+V Q YM R+ +H S ES SRV++W+ EA+VLV M + Q+ + +FFEV+R V
Sbjct: 2 QRNLLVTILTLALVQLLQTAQAFIVNVDAHNEECFFEKIEAGTKFSVTFEVIEGG-FLDIDIKVTGPDQGIMHQSEKESSSRLTFAAVTTGVYTVCFDN----QKSSMTPKLVMFSIDVGESPHRAPGAPGEEDIGHTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSINESTNSRVVLWSTFEALVLVLMTIGQVYYLKRFFEVKRVV 207
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|674576063|emb|CDS38354.1| (transmembrane emp24 domain containing protein [Echinococcus multilocularis]) HSP 1 Score: 107.842 bits (268), Expect = 1.296e-25 Identity = 67/209 (32.06%), Postives = 107/209 (51.20%), Query Frame = 0
Query: 15 RSLLVVLSLLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRT---DVLVDEAIASEQSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
R ++VVLS L + ++ V + +C+ A GD FEV GG Y + V + PDG L++ +S +SF A G +T C +N + P+ V F+ + +E IA EQS +LI++ + L+ + N Y+ RE+LH + E+ SRV++W EAV++VGM++ Q+ + +FFEVRR V
Sbjct: 3 RLVVVVLSFLSC-----SSYAYFVTIDANAEQCFFDRAKPGDRLTLFFEVSEGGFY-DINVKLTAPDGSTLYKIEKESSGHYSFTANTEGKYTYCFNN----KMSTVTPKTVLFALEKGSQKLGKEEGIAPEQS--KLIDMVDELSNAVLNAKHEMEYLEVRENLHRAINENTNSRVVMWAAFEAVIIVGMSLGQVYYLKRFFEVRRMV 199
BLAST of EWM29134.1 vs. NCBI_GenBank
Match: gi|908464108|ref|XP_013086359.1| (PREDICTED: transmembrane emp24 domain-containing protein 2-like [Biomphalaria glabrata]) HSP 1 Score: 107.457 bits (267), Expect = 2.322e-25 Identity = 61/200 (30.50%), Postives = 102/200 (51.00%), Query Frame = 0
Query: 23 LLLLILLLKPATSFTVEVAPGTVECYITVATQGDDFLGNFEVLTGGSYAPVEVTVEGPDGKLLWRAADKSEETFSFEAEENGDHTLCISNGARGRADDGIPRLVGFSFRTDVLVDEAIASE--QSIRRLIELGNSLTKGLTNVMDHQSYMRQREDLHASTMESIGSRVLIWTVVEAVVLVGMAVWQISIISKFFEVRRAV 220
++ L+ L++ + + + + EC+ T G FEV GG + +++ + GPDGK++ +S ++F A +G++ C SN P++V FS +A E + +L E+ N L+ LT V Q YM RE +H S ++ SRV++W+ EA+VLV M + Q+ + +FFEVRR V
Sbjct: 10 IVTLLSLIQSSEQYFISIDAHAEECFFDKVTSGTKMSLMFEVAEGG-FLDIDIKIYGPDGKVIHSGDRESNGKYTFAAHMDGNYKYCFSNAMSTMT----PKIVVFSIDIGEKPKDAAGEEGDANQNKLTEMINELSTALTGVKHEQEYMEVRERIHRSINDNTNSRVVLWSFFEALVLVAMTLGQVYYLKRFFEVRRVV 204 The following BLAST results are available for this feature:
BLAST of EWM29134.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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