EWM29206.1, cds1551 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|585111726|gb|EWM29206.1| (protein kinase c binding protein [Nannochloropsis gaditana]) HSP 1 Score: 377.096 bits (967), Expect = 1.708e-132 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query: 1 MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG
Sbjct: 1 MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|585111725|gb|EWM29205.1| (protein kinase c binding protein [Nannochloropsis gaditana]) HSP 1 Score: 359.377 bits (921), Expect = 6.738e-125 Identity = 177/182 (97.25%), Postives = 177/182 (97.25%), Query Frame = 0
Query: 1 MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQ P
Sbjct: 1 MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|552847308|ref|XP_005851832.1| (hypothetical protein CHLNCDRAFT_133322 [Chlorella variabilis] >gi|307111496|gb|EFN59730.1| hypothetical protein CHLNCDRAFT_133322 [Chlorella variabilis]) HSP 1 Score: 185.652 bits (470), Expect = 1.766e-57 Identity = 85/118 (72.03%), Postives = 99/118 (83.90%), Query Frame = 0
Query: 65 DAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
D G PT+FDKI+ K+IP+ IYED+ +AF D+SPQGPVHFLVIPK R GL++LSKA+E HK LLGHLLYVA QVAKQEGL G+RV INDGP+G QSVYHLH+H+IGGRQM WPPG
Sbjct: 16 DTGAPTIFDKIIAKQIPAQIIYEDEQALAFRDISPQGPVHFLVIPKVRNGLTQLSKAKEEHKPLLGHLLYVAAQVAKQEGLS-QGYRVAINDGPNGCQSVYHLHLHIIGGRQMSWPPG 132
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|255084700|ref|XP_002504781.1| (predicted protein [Micromonas commoda] >gi|226520050|gb|ACO66039.1| predicted protein [Micromonas commoda]) HSP 1 Score: 182.185 bits (461), Expect = 2.870e-56 Identity = 84/119 (70.59%), Postives = 101/119 (84.87%), Query Frame = 0
Query: 64 ADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
A++GEPT+FDKI+ KEIPS+ IYED+ C+AF D++PQ HFLVIPK R+GL++LSKAEE HK LLGHLLY AQ+VAKQE L GFRVVINDG +G QSVYHLHIHV+GG+Q+ WPPG
Sbjct: 2 ANSGEPTIFDKIIAKEIPSDVIYEDNLCLAFRDIAPQAKTHFLVIPKIRSGLTQLSKAEEGHKELLGHLLYTAQKVAKQEKL-DKGFRVVINDGVEGCQSVYHLHIHVVGGQQLSWPPG 119
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|1200531145|gb|OUW43830.1| (histidine triad nucleotide-binding protein [bacterium TMED181]) HSP 1 Score: 179.874 bits (455), Expect = 2.397e-55 Identity = 83/119 (69.75%), Postives = 100/119 (84.03%), Query Frame = 0
Query: 64 ADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
A++GE T+FDKI+ KEIPS+ IYED+ C+AF D++PQ HFLVIPK R+GL++LSKAEE HK LLGHLLY AQ+VAKQE L GFRVVINDG +G QSVYHLHIHV+GG+Q+ WPPG
Sbjct: 2 ANSGEATIFDKIIAKEIPSDIIYEDNLCLAFRDIAPQAKTHFLVIPKIRSGLTQLSKAEEGHKELLGHLLYTAQKVAKQEKL-DQGFRVVINDGVEGCQSVYHLHIHVVGGQQLSWPPG 119
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|325180399|emb|CCA14803.1| (14 kDa zincbinding protein putative [Albugo laibachii Nc14]) HSP 1 Score: 181.415 bits (459), Expect = 3.886e-55 Identity = 93/184 (50.54%), Postives = 125/184 (67.93%), Query Frame = 0
Query: 4 RLVRLSQHLLVHRTSLHATS-IAVRLSRTTRRCLVTGNQA--NTMADEVAESRKAAAKKMEEAADAGEP--TVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
RL+R ++H +SLH R + R T + M+ + +E KA A E A G+P T+FDKI++KEIP+ +ED+ C+AFHD+ PQ PVH L+IPK+ GLS+LS AEE HK +LGHL+YVA++VA+ +GL GFR+VINDGPDG QSVYHLHIH++GGR++GWPPG
Sbjct: 2 RLIRFAEHAT---SSLHGCRRFRNRFNFENRSVFSTPLKLYHRGMSSQTSEREKADAAA--ELAGTGKPKVTIFDKIIRKEIPAKIAFEDEMCLAFHDVQPQAPVHILIIPKNSDGLSQLSAAEERHKPILGHLMYVARKVAQDQGLA-NGFRIVINDGPDGCQSVYHLHIHLLGGRKLGWPPG 179
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|1004144108|gb|KXZ52089.1| (hypothetical protein GPECTOR_10g1112 [Gonium pectorale]) HSP 1 Score: 179.489 bits (454), Expect = 4.720e-55 Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 0
Query: 65 DAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
D PT+FDKIV K+IP+ IYEDD +AF D+SPQ PVHFLVIPK+R+GL+RLSKA E HKALLGHLL+VAQ+VA E L GFRV INDGP+G QSVYHLH+HV+GGRQ+ WPPG
Sbjct: 17 DQDPPTIFDKIVAKQIPATIIYEDDQALAFRDISPQAPVHFLVIPKNRSGLTRLSKATEEHKALLGHLLFVAQKVAMAENLGE-GFRVTINDGPNGCQSVYHLHLHVMGGRQLTWPPG 133
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|303283059|ref|XP_003060821.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226458292|gb|EEH55590.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 178.333 bits (451), Expect = 1.157e-54 Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 0
Query: 65 DAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
++GEPT+FDKIV KEIP+ IYED+ C+AF D++PQ HFLVIPK RAGL+RLS AEE HKALLGHLL+ AQ+VAK EGL GFRVVINDG G QSVYHLH+HV+GG+Q+ WPPG
Sbjct: 3 NSGEPTIFDKIVAKEIPATVIYEDNLCLAFRDVAPQAKTHFLVIPKIRAGLTRLSNAEEEHKALLGHLLFTAQRVAKDEGLGE-GFRVVINDGVQGCQSVYHLHLHVLGGQQLTWPPG 119
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|159476202|ref|XP_001696200.1| (protein kinase C binding protein [Chlamydomonas reinhardtii] >gi|158282425|gb|EDP08177.1| protein kinase C binding protein [Chlamydomonas reinhardtii]) HSP 1 Score: 177.563 bits (449), Expect = 2.630e-54 Identity = 81/118 (68.64%), Postives = 96/118 (81.36%), Query Frame = 0
Query: 65 DAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
D PT+FDKIV KEIP+N IYEDD+ +AF D+ PQ PVHFLVIPK R GL+RLSKA HKALLGHL++VAQ VA +E L GFRVV+NDGP+G QSVYHLH+H++GGRQ+ WPPG
Sbjct: 16 DTEPPTIFDKIVSKEIPANIIYEDDEALAFRDIQPQAPVHFLVIPKKRNGLTRLSKASPEHKALLGHLMWVAQHVAMKENLG-DGFRVVVNDGPNGCQSVYHLHLHIMGGRQLTWPPG 132
BLAST of EWM29206.1 vs. NCBI_GenBank
Match: gi|116792646|gb|ABK26444.1| (unknown [Picea sitchensis] >gi|148910222|gb|ABR18192.1| unknown [Picea sitchensis] >gi|224284605|gb|ACN40035.1| unknown [Picea sitchensis]) HSP 1 Score: 178.718 bits (452), Expect = 2.803e-54 Identity = 89/157 (56.69%), Postives = 112/157 (71.34%), Query Frame = 0
Query: 26 VRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
+RL VT NQA+ MA E K AA + D G+PT+FDKI++KEIPS +YED+ +AF D++PQ P H ++IPK R GL+ LS+AEE H+ +LGHLLY A+ +AKQEGL GFR+VINDGP G QSVYHLHIH++GGRQM WPPG
Sbjct: 11 LRLKVLGSHLGVTFNQAHHMASE-----KEAA--LAATPDDGKPTIFDKILQKEIPSTVVYEDEKVLAFRDIAPQAPTHIIIIPKVRDGLTGLSQAEERHEDILGHLLYTAKVIAKQEGL-SDGFRIVINDGPSGCQSVYHLHIHLLGGRQMNWPPG 159 The following BLAST results are available for this feature:
BLAST of EWM29206.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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