EWM29195.1, cds1538 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29195.1 vs. NCBI_GenBank
Match: gi|585111715|gb|EWM29195.1| (hypothetical protein Naga_100007g29 [Nannochloropsis gaditana]) HSP 1 Score: 1241.48 bits (3211), Expect = 0.000e+0 Identity = 617/617 (100.00%), Postives = 617/617 (100.00%), Query Frame = 0
Query: 1 MTSRGPLSRRCIFWAIHTAGLLHQLALVRAFLPPVVPPTSLHSTSKPGPLSTADIFPAPTIQVRKTWHLGGSWTISSHYIPPTEATSPSSCVVMQATSAKETTKGTMNARRKNMLEEEFRRISKQDQADLISLSSFFTSGEVAELLKEKLLAKAEVESFWIGELGDKAEPADLDAFLAVYEKIDALFEEEEEDEDVEVGQAGAVKGITLEEFLASGDVSRYLEENLISREEVESMWAAEAGFRGASAGVRAVLSAEGSMRVYAGIEDLLEEVVDDAEKSDETQTAVPEENEGKELRAEYMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEEEVAPRQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVRLAGLLEEDKALDDYVGALVEAMLDEEANLAARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTLGRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSSDSYFVFSRRTEGAADRMS 617
MTSRGPLSRRCIFWAIHTAGLLHQLALVRAFLPPVVPPTSLHSTSKPGPLSTADIFPAPTIQVRKTWHLGGSWTISSHYIPPTEATSPSSCVVMQATSAKETTKGTMNARRKNMLEEEFRRISKQDQADLISLSSFFTSGEVAELLKEKLLAKAEVESFWIGELGDKAEPADLDAFLAVYEKIDALFEEEEEDEDVEVGQAGAVKGITLEEFLASGDVSRYLEENLISREEVESMWAAEAGFRGASAGVRAVLSAEGSMRVYAGIEDLLEEVVDDAEKSDETQTAVPEENEGKELRAEYMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEEEVAPRQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVRLAGLLEEDKALDDYVGALVEAMLDEEANLAARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTLGRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSSDSYFVFSRRTEGAADRMS
Sbjct: 1 MTSRGPLSRRCIFWAIHTAGLLHQLALVRAFLPPVVPPTSLHSTSKPGPLSTADIFPAPTIQVRKTWHLGGSWTISSHYIPPTEATSPSSCVVMQATSAKETTKGTMNARRKNMLEEEFRRISKQDQADLISLSSFFTSGEVAELLKEKLLAKAEVESFWIGELGDKAEPADLDAFLAVYEKIDALFEEEEEDEDVEVGQAGAVKGITLEEFLASGDVSRYLEENLISREEVESMWAAEAGFRGASAGVRAVLSAEGSMRVYAGIEDLLEEVVDDAEKSDETQTAVPEENEGKELRAEYMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEEEVAPRQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVRLAGLLEEDKALDDYVGALVEAMLDEEANLAARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTLGRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSSDSYFVFSRRTEGAADRMS 617
BLAST of EWM29195.1 vs. NCBI_GenBank
Match: gi|553177869|ref|XP_005852504.1| (hypothetical protein NGA_0031802 [Nannochloropsis gaditana CCMP526] >gi|422296030|gb|EKU23329.1| hypothetical protein NGA_0031802 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1001.12 bits (2587), Expect = 0.000e+0 Identity = 508/511 (99.41%), Postives = 509/511 (99.61%), Query Frame = 0
Query: 107 MNARRKNMLEEEFRRISKQDQADLISLSSFFTSGEVAELLKEKLLAKAEVESFWIGELGDKAEPADLDAFLAVYEKIDALFEEEEEDEDVEVGQAGAVKGITLEEFLASGDVSRYLEENLISREEVESMWAAEAGFRGASAGVRAVLSAEGSMRVYAGIEDLLEEVVDDAEKSDETQTAVPEENEGKELRAEYMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEEEVAPRQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVRLAGLLEEDKALDDYVGALVEAMLDEEANLAARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTLGRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSSDSYFVFSRRTEGAADRMS 617
MNARRKNMLEEEFRRISKQDQADLISLSSFFTSGEVAELLKEKLLAKAEVESFWIGELGDKAEPADLDAFLAVYEKIDALFEEEEEDEDVEVGQAGAVKGITLEEFLASGDVSRYLEENLISREEVESMWAAEAGFRGASAGVRAVLSAEGSMRVYAGIEDLLEEVVDDAEKSDETQTAVPEENEGKELRAEYMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEE+VAPRQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASV LAGLLEEDKALDDYVGALVEAMLDEEANLAARDELEI DLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTLGRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSSDSYFVFSRRTEGAADRMS
Sbjct: 1 MNARRKNMLEEEFRRISKQDQADLISLSSFFTSGEVAELLKEKLLAKAEVESFWIGELGDKAEPADLDAFLAVYEKIDALFEEEEEDEDVEVGQAGAVKGITLEEFLASGDVSRYLEENLISREEVESMWAAEAGFRGASAGVRAVLSAEGSMRVYAGIEDLLEEVVDDAEKSDETQTAVPEENEGKELRAEYMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEEKVAPRQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVLLAGLLEEDKALDDYVGALVEAMLDEEANLAARDELEITDLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTLGRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSSDSYFVFSRRTEGAADRMS 511
BLAST of EWM29195.1 vs. NCBI_GenBank
Match: gi|298707415|emb|CBJ30044.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 137.887 bits (346), Expect = 1.897e-30 Identity = 156/577 (27.04%), Postives = 251/577 (43.50%), Query Frame = 0
Query: 129 DLISLSSFFTSGEVAELLKEKLLAKAEVESFWIGELGDKAEPA----DLDAFLAVYEKIDALFEEEE---------------------------EDEDVEVGQAGAVKGI-TLEEFLASGDVSRYLEENLISREEVESMWAAEAGFRGASAGVRAVLSA---EGSMRVYAGIEDLLEEVVDDAEKSDETQTAVPEENE-------------------------------------GKELRAE------YMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGD-----VVDFAGFQALSSALDDLFLEEGEEEEEVAPRQTAAAA--YKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVRLAGLLEEDKA------LDDYVGALVEAM----LDEEANLAARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTLGRD--LNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSS-DSYFVFSR 607
+ + L F +V ELL++ LL +EV + W + KA+PA D F + ++DALFEEEE E E V G+ +G+ L L +++ EE L+ +EEVE MW G + V+A A EG + +G + ++ D E +E+ T ++++ GKE A+ + + E + L E+ +LLE+ L+SREEVGSM++ + +G G +D GF + LD+ F + E+ EE + +A + A+ A A E P+ + + A RL + + + A +D ++EAM EE NL D+L L + GEW L Y++S M YN+GL+GL ++P +F G Q + +G + Y E L T G L + V WE+K S+++G+ + + V P I YGF+ R E WK +R + ++ YLD +LR+M+GQ++ ++FVF R
Sbjct: 149 EFLGLDGFRALADVRELLEDGLLRDSEVLAIW--KAVPKADPAGDRVDFVGFSQAFARVDALFEEEEEEGGEEGVAEAGTSRGGGGSGVAVGPGETEASFVELVGSSEGVLDLAGLLRWSELTELFEEGLLKQEEVEQMWE---GLPKVANRVQAAGEAGTEEGMLINLSGFLEFDRQLSDLFEDEEESGTGAADQDQPPTATSTAASTPPATPAAATPVVAAAAPASPEAMDLAGKEAVADEGTPEGQFLRLSANTEGVLTLDDLLGWTEVAELLEDDLMSREEVGSMFESLPKTKGRGSSTSSPAIDVKGFVEFARKLDETFEDFEEDGEETSSTDASARSDGTDASDGATANEQLPDMTASEAVVPKEGNAVEAKARLLSMCQREMADCGMGCGEDKRAEMLEAMEALLATEEGNLVLGDDLGTG-LINTLAGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELVTGGDSEPLIITVTSDWEVKQTSSLVTGKSSVAISVAPKQIKYGFITVRSER-WKTLRAMMLLDIAYLDANLRIMRGQTARQNFFVFVR 718
BLAST of EWM29195.1 vs. NCBI_GenBank
Match: gi|397569970|gb|EJK47080.1| (hypothetical protein THAOC_34231 [Thalassiosira oceanica]) HSP 1 Score: 124.79 bits (312), Expect = 3.496e-28 Identity = 98/296 (33.11%), Postives = 153/296 (51.69%), Query Frame = 0
Query: 318 RTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEEEVAP---RQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVRLAGLLEEDKALDDYVGALVEAMLDEEANLAARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRT--LGRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQ-SSDSYFVFSR 607
R EL D+L E +++ EV +++D G D++D GF++ ++D+LF +E + +EE P + AK AE EG ++ G +L E + + G LE + Y +V + E + +D+L GEWE YS+S TM+YN GLSGL L K F G Q+++ F + YTE+L T LG D V + G W+L+ VS+ +G+L +M V P + YG ++ + WK + +N L YLDEDLR+M+G S+D+ F++ R
Sbjct: 16 RWGELNDMLNEEDITQAEVDALFDSAPKAPGAVDLLDEEGFESFFDSIDNLFEDEDDGDEEAEPVIDEKELKEELLELLEDLAKLAEDEGQQLCGLDCSEL-EQERVLEVVGELEREP----YNQVVVPDGVTGEGAI-TKDQL---------TGEWEFIYSSSSTMKYNEGLSGLAGGLTK--FGGLRQTLSSTKFLSDVEYTEQLETKLLGADTEVKITGDWDLRTEVSLFTGKLSNVMSVTPDRVIYGPRSDKADH-WKSLGPMNLLLLTYLDEDLRIMRGSTSTDTLFIWRR 293
BLAST of EWM29195.1 vs. NCBI_GenBank
Match: gi|1210519128|dbj|GAX22126.1| (hypothetical protein FisN_6Hh375 [Fistulifera solaris]) HSP 1 Score: 121.709 bits (304), Expect = 1.182e-25 Identity = 129/517 (24.95%), Postives = 226/517 (43.71%), Query Frame = 0
Query: 142 VAELLKEKLLAKAEVESFW-----IGELGDKAEPADLDAFLAVYEKIDALFEEEEEDEDVEVGQAGAVKGI-----------------TLEEFLAS--------------------GDVSRYLEENLISREEVESMWAAEAGFRGASAGVRAVLSAEGSMRVYAGIEDLLEEVVDDAEKSDETQTAVPE------ENEGKELRAEYMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEEEVAPRQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVRLAGLLEEDKALDDYVGALVEAMLDEEANLAARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTL--GRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSS-DSYFVFSR 607
+ +LL + L E++ W ++ A D+D+F+ VY ID LFE++ E+ + E A A++ T+E+ L S ++ + + + L+ +E E +W G S G L +G + ++ L E ++ E+ D+ + + EG E A++ G + + +R EL +L++EG +S E+ D + + + +D F A A+DDLF E + +E TA A A + L + A + ++L GL D+ + + + ML++E+ R + + D + + G WEL YS+S M++N+GLSGLG S P +F G + + + + YTER+ +V V G W L+ +S+ +GE + + + P + YG R + WK + LN ++ YLD+DLR+M+G +S D+ FVF R
Sbjct: 12 ILQLLADGDLLAEELDDIWEKAPKFPDVTASAARIDVDSFVQVYRDIDDLFEDDGEESNPEQSTAAALEPTETKETPQVDDQTEDVDKTMEDELESVFNSIADGNGLISKQALMNWDEIEKLVSDGLLGSDEFEELW----GKTKKSLGADDKLDIDGFLSFNVALDSLFEFSDEEMEEDDDDDSVGEDIVRGQLVEEGDRSPQELFASLAG-ADGLVSKGDLMRWAELLELIDEGELSMSEL----DGIFTANAVAEKLDETRFLAFYKAIDDLF--EYDVNDESDESSTADQKVPGAVATNDPPSSKTTLLGMLEALNEDNDLLP----CGLEASDREQANILKVI--NMLEQESANLIRSKQGVVD-ENDLAGNWELLYSSSSAMKFNKGLSGLGGSFPNGKFGGLKMRLDSSKYMSDVEYTERISVTPEAASFDVTVTGDWTLRQSISLFTGEPSITLAITPERVNYGPTSTRADH-WKSLGPLNMLDVAYLDKDLRIMRGSTSLDTVFVFRR 509
BLAST of EWM29195.1 vs. NCBI_GenBank
Match: gi|1210526637|dbj|GAX14595.1| (hypothetical protein FisN_6Lh375 [Fistulifera solaris]) HSP 1 Score: 117.087 bits (292), Expect = 6.140e-24 Identity = 146/562 (25.98%), Postives = 238/562 (42.35%), Query Frame = 0
Query: 126 DQADLISLSSFFTSGEVAELLKEKLLAKAEVESFW-----IGELGDKAEPADLDAFLAVYEKIDALFEEEEEDEDVEVGQ---AGAVKGIT-LEEFLASGDVSRYLEENLISREEVESMWAAEA-----------------------GFRGA------------SAGVRAVLSAEGSMRVYAGIEDLLEEVVDDAEKSD-----------ETQTAVPEEN---EGKELRAEYMAAIGGDLEAEMDYAAFLRTNELPDLLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEGEEEEEVAPRQTAAAAYKAAAAAQAKEAEPEGLRIVGPAKPQLKEMLASVRLAGLLEEDKALDDYVGALVEAMLDEEANL-------------------AARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTL--GRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSS-DSYFVFSR 607
D L+S SS + +LL + L E++ W ++ A D+D+F+ VY ID LFE D+ V Q A AV+ T +E A+ D + Y+++N+ +E+ES++ + A G GA S G L +G + ++ L E ++ E++D T + E EG E A + G + + +R EL +L++EG +S E+ ++ S + +D + F AL A+DDLF E + +E ++ A + A A +P + L G++E +D + +EA E+AN+ A DE +IA G WEL YS+S M++N+GLSGLG S P +F G + + + + YTER+ +V V G W L+ +S+ +GE + + + P + YG R + WK + LN ++ YLD+DLR+M+G +S D+ FVF R
Sbjct: 33 DDEGLMSKSSIQRIPFILQLLADGDLLAEELDDIWEKAPKFPDVTTSAARIDVDSFVQVYRDIDDLFE----DDGVVSKQEQPASAVREPTETKENPATEDQTDYVDKNM--EDELESVFNSIADDDGLISKQALVNWDEIEKLLRDGLLGADEFDELWGKTKKSLGADDKLDIDGFLSFNVALDSLFEFSDEEMEEADDDDDDDDDDDDSTMEDIVEGQLVEEGDRSPQELFALLAG-ADGLVSKGNLMRWAELLELIDEGDLSMSELEGIF----SANAVAEKLDESRFLALYKAIDDLF--EYDVNDESDKSNESSRANQKVPNAVATRDQPS----------------SKTTLLGMIEVLNEDNDLLPCGLEASDREQANILKVINMLEQEPSNLIRSKQGAVDENDIA-------GNWELLYSSSSAMKFNKGLSGLGGSFPNGKFGGLKMRLDSSKYMSDVEYTERISVTPEAASFDVTVTGDWTLRQSISLFTGEPSITLAITPERVNYGPTSTRADH-WKSLGPLNMLDVAYLDKDLRIMRGSTSLDTVFVFRR 557
BLAST of EWM29195.1 vs. NCBI_GenBank
Match: gi|1072231783|gb|OEU16515.1| (hypothetical protein FRACYDRAFT_269026 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 105.916 bits (263), Expect = 9.312e-22 Identity = 84/300 (28.00%), Postives = 148/300 (49.33%), Query Frame = 0
Query: 325 LLEEGLVSREEVGSMWDKVRSERGTGDVVDFAGFQALSSALDDLFLEEG----------EEEEEVAPRQTAAAAYKAAAAAQAKEAEPEGLRIV---GPAKPQLKEMLASVRLAGLLEEDKALDDYVGALVEAMLDEEA-NLAARDELEIADLQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTL--GRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSSDSYFVFSRR 608
+L+EG + E+ +M++K+ + +G + + AGF L +D+LF E+ +EE A +Q AA+ + KE L I+ A+P GL E+ + + L ++L+++ N+ + ++ ++DL G WEL Y++S M++N+GLSG+G S P F G +Q + + + Y ER+ +V V G+W+L+ VS+ +G +IM + P + Y R + WK + NR +L YLD+D+RVM+G +S + R+
Sbjct: 1 MLKEGDLLPTELLAMYNKLVTPDSSGKLNE-AGFLKLYDEIDNLFEEDDDDDDDDDDDDNNKEENAVQQVAASEKSQMENMRVKEDLLSFLDIIQDSDDAEP-----------CGLSAEESDQEQVLNIL--SILEKQTTNIIKQKDIVLSDLA----GNWELLYTSSAGMKFNKGLSGIGGSFPNGRFGGLNQKLTFTKYVSDLEYKERIEVTPSSASFDVTVTGSWDLRTSVSLFTGLPTIIMYLEPDRVKYVLGSTRAD-HWKSLGPTNRMDLSYLDDDIRVMRGCTSTDTLLIYRK 281
BLAST of EWM29195.1 vs. NCBI_GenBank
Match: gi|873223888|emb|CEM27718.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 90.8929 bits (224), Expect = 1.261e-15 Identity = 46/145 (31.72%), Postives = 82/145 (56.55%), Query Frame = 0
Query: 463 LQKAMEGEWELAYSTSRTMRYNRGLSGLGKSLPKVEFLGFSQSIAVNGFALETVYTERLRTLGRDLNVVVEGAWELKDVVSIMSGELCLIMDVLPATITYGFMRERIETGWKGVRVLNRCELLYLDEDLRVMKGQSSDSYFVFSR 607
L K + G W+L Y++S T+R+N+GLSGL K++P F+ Q + + + YTER+ + ++V + G W+++ S + + + + +YGF+ + T W +R EL+Y+D DL++++G + S FVFSR
Sbjct: 390 LLKTLAGGWKLDYTSSDTVRFNKGLSGLAKTIPGSIFMKLEQQLLTDSILSDFEYTERIGS----VDVTLTGVWDVRLRTSQFTNKPVFMFEQTFEKASYGFVNSKCTT-WPSLRPYAGMELVYVDADLQIVRGNAETSLFVFSR 529 The following BLAST results are available for this feature:
BLAST of EWM29195.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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