EWM29109.1, cds1513 (CDS) Nannochloropsis gaditana

Overview
NameEWM29109.1
Unique Namecds1513
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:826899..828809 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29109.1
Productdead deah box rna helicase
Orig transcript idgnl|cribi|Naga_100007g59.6436.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:826899..828809 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|585111629|gb|EWM29109.1| (dead deah box rna helicase [Nannochloropsis gaditana])

HSP 1 Score: 1305.43 bits (3377), Expect = 0.000e+0
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0
Query:    1 MNGSSKRRRQEVDEEDEKLKALLQSSDDYVPYVSLKHRQGLSRNGKDAGHEVEARDQQERTDEDTDNSGEPVADGILKSRLDLDAEVTATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLISSGGYGGEY 636
            MNGSSKRRRQEVDEEDEKLKALLQSSDDYVPYVSLKHRQGLSRNGKDAGHEVEARDQQERTDEDTDNSGEPVADGILKSRLDLDAEVTATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLISSGGYGGEY
Sbjct:    1 MNGSSKRRRQEVDEEDEKLKALLQSSDDYVPYVSLKHRQGLSRNGKDAGHEVEARDQQERTDEDTDNSGEPVADGILKSRLDLDAEVTATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLISSGGYGGEY 636          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|299471815|emb|CBN79482.1| (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 816.224 bits (2107), Expect = 0.000e+0
Identity = 380/545 (69.72%), Postives = 458/545 (84.04%), Query Frame = 0
Query:   92 RSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLISSGGYGGEY 636
            R+LLE  +E+KK   ++D   +K    K++E R+L EANQVQTNAL SA E A+G +Y+++L T W PP + R M++ DC   R+KW I+ +G  +PPPIK+FR+MK P P++ A+  KGI +PTPIQVQG+PV LSGRDM+GIAFTGSGKT+TF +PL+MLAL EE K+P+ GGEGP G+ILCPSRELA QTF+V+DY+C+ L RGGFP  R +LCIGG DKR+QID +QRQGVH +VATPGR+ DLLH  K+   LC+Y CLDE DRMLD+GFDEEV +IMNHFKQQRQTLLFSATMP K QDFAK+ LV+PVLVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV IFCE+K DVD+IHEYLLLKGVDAV+IHGGK+Q ER+EAI+ FK GVKDVL+ATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  VE+S LLDLKHLL+EA+QRVPPVL ALEDPDQ++   +DGV+GCAFCGGLGHRIT+CPKIDK A +    +RD+L  +GGYGG++
Sbjct:  117 RTLLEAAKELKKATANLDAGTIKQMRAKEEEHRMLKEANQVQTNALMSAAEVAKGTRYTEALTTSWRPPKYYRDMTEEDCDKLREKWSILVDGEKVPPPIKSFREMKLPDPMLAALEAKGIKRPTPIQVQGVPVALSGRDMIGIAFTGSGKTVTFSIPLIMLALEEEMKLPVVGGEGPFGVILCPSRELARQTFDVVDYFCKHLHRGGFPELRTVLCIGGEDKRSQIDPIQRQGVHCIVATPGRISDLLHTHKVHFDLCKYICLDEGDRMLDMGFDEEVQKIMNHFKQQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQEERNEAIKLFKEGVKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKMVEESALLDLKHLLMEAQQRVPPVLMALEDPDQEMD-EVDGVKGCAFCGGLGHRITNCPKIDKTASQKAGAQRDVLADTGGYGGDW 660          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|669170901|ref|XP_008620799.1| (hypothetical protein SDRG_16370 [Saprolegnia diclina VS20] >gi|530727532|gb|EQC25774.1| hypothetical protein SDRG_16370 [Saprolegnia diclina VS20])

HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0
Identity = 386/621 (62.16%), Postives = 466/621 (75.04%), Query Frame = 0
Query:   22 LLQSSDD--YVPYVSLKHRQGLSR-NGKDAGHEVEARDQQERTDEDTDNSGE---PVADGILKSRLDLDAEVTATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML-ISSGGYGGE 635
            +L + DD  YVP    +  +   R   +   HE   +   E +DE  + S E   P  D +L      +A    +  SL++ + EMKK+RE        +  Q   E ++L EA+QVQ  AL SA ERA+G++Y++S+ T WTPP H+  M++ DC   RKKWHI+ +G D+PPPIK+F DM+FP  I+ A+  K I +PTPIQVQ +P +LSGRD++GIAFTGSGKTMTF LPLV+ AL +E KMP+   EGP G+IL PSREL  QTFE++ ++  AL +GGFP  R++LCIGG DKR Q+D + + GVHIVVATPGRL+D L+ KKM+L LC Y CLDE DRMLDLGFDEEVA I NHFK QRQTLLFSATMP K QDFAK+ LVRP+LVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV AV+IHGGKDQ ER+ AI  FK G KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  V +S LLDLKHLL+EAKQRVPPVL ALEDP +       G +GCAFCGGLGHRITDCPK+D +AR++ +GRRD L   S GYGG+
Sbjct:    1 MLGTMDDGLYVPLKKRRQEEEARRLQRRKLVHEKLRQVDGEESDEAPEASDEAPGPQPDEVL------EAAPARSTMSLIDQSFEMKKRREEAG-VDEDIRVQTTSEVQLLHEASQVQKAALVSAAERAEGIRYTESMTTTWTPPRHIARMTEDDCENVRKKWHILVDGDDIPPPIKSFADMRFPPAILAALKAKNIVRPTPIQVQAIPCILSGRDIIGIAFTGSGKTMTFTLPLVLRALEQEVKMPIVAREGPFGVILGPSRELMRQTFEIVQHFTSALFKGGFPELRSILCIGGQDKREQLDLIFKAGVHIVVATPGRLKDFLNSKKMTLDLCEYICLDEGDRMLDLGFDEEVAAIFNHFKSQRQTLLFSATMPQKFQDFAKQVLVRPILVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVAAVSIHGGKDQVERNAAIDAFKVGAKDVLVATDIAAKGLDFPDIQHVINFDMPTEIENYVHRIGRTGRCGKTGVATTFINKNVPESALLDLKHLLVEAKQRVPPVLSALEDPMETSQANATGSKGCAFCGGLGHRITDCPKLDANARKINAGRRDYLGGQSAGYGGD 614          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|1173954298|gb|OQS01773.1| (DEAD/DEAH box RNA helicase [Achlya hypogyna])

HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0
Identity = 384/621 (61.84%), Postives = 460/621 (74.07%), Query Frame = 0
Query:   32 YVSLKHRQGLSRNGKDAGHEVEARDQQERT-------------DEDTDNSGEPVADGILKSRLDLDAEVTATKRS---LLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML-ISSGGYGGE 635
            YV LK R+           E EAR QQ R               E+   + EP A+       DL A   A +RS   L++ + EMKK+RE          AQ   E ++L EA+QVQ  AL SA ERA+G++Y++S+ T WTPP H+  M++ +    R KWHI+ +G D+PPPIK+F DM+FP  I+ A+  K I +PTPIQVQ +P +LSGRD++GIAFTGSGKTMTF LPL++ AL +E KMP+   EGP G+IL PSREL  QTFE++ ++ +AL +  +P  R++LCIGG DKR Q++ V R GVHIVVATPGRL+D L+ KK+SL LC Y CLDE DRMLDLGFDEEVA I NHFK QRQTLLFSATMP K QDFAK+ LVRPVLVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV AV+IHGGKDQ ER+ A+  FK G KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  V +S LLDLKHLL+EAKQRVPPVL ALEDP +       G +GCAFCGGLGHRITDCPK+D +AR++ +GRRD L   S GYGG+
Sbjct:    6 YVPLKKRR----------QEEEARRQQRRKLMHEKLRQIDGNESEEAPETAEPSAE-------DLPAVEEAPQRSTVSLIDQSFEMKKRREEAG-VDEDSRAQTTSEVQLLHEASQVQKAALVSAAERAEGIRYTESMVTTWTPPRHIARMTEEERDVVRAKWHILVDGDDIPPPIKSFADMRFPPAILTALKAKNIVRPTPIQVQAIPCILSGRDIIGIAFTGSGKTMTFTLPLILRALEQEVKMPIVSREGPFGVILGPSRELMRQTFEIIQHFTRALFQAKYPELRSILCIGGQDKREQLELVYRAGVHIVVATPGRLKDFLNAKKLSLDLCEYICLDEGDRMLDLGFDEEVAAIFNHFKAQRQTLLFSATMPQKFQDFAKQVLVRPVLVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVAAVSIHGGKDQVERNAAVDAFKAGAKDVLVATDIAAKGLDFPDIQHVINFDMPTEIENYVHRIGRTGRCGKTGVATTFINKNVPESALLDLKHLLVEAKQRVPPVLRALEDPLEASQTNATGSKGCAFCGGLGHRITDCPKLDANARKINAGRRDYLGGQSAGYGGD 608          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|698814034|ref|XP_009840046.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574104805|gb|ETV70332.1| hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0
Identity = 365/546 (66.85%), Postives = 441/546 (80.77%), Query Frame = 0
Query:   82 DLDAEV-TATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML 626
            D+DA   T +  SLL+ + ++KKKRE+ +        Q   E ++L EA+QVQ  AL SA E A GV+Y++SL+T WTPP H+  +++ +C   RKKWHI+ +G D+PPPIK+F +M+FP  I+ ++  K I +PTPIQVQ +P +LSGRD++GIAFTGSGKT+TF LPLVMLAL +EKKMPL   EGP G+IL PSREL  QT+E++ ++  +L + GFP  R+LLC+GG DKR Q+D + ++GVHIVVATPGRL+D L  KKM L LC+Y CLDE DRMLDLGFDEEVA I NHFK QRQTLLFSATMP K QDFAK+ LVRP+LVNVGRAGAANLDV+QEVE VK +AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV+AV+IHGGKDQ ER+EAI  FK G KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  V +S LLDLKHLL+EAKQRVPPVL+AL+DP + L     G +GCAFCGGLGHRITDCPK++ +AR+L +GRRD L
Sbjct:   66 DVDAAAPTRSTVSLLDQSFQLKKKREN-EGVNEDDRIQSTSEVQLLHEASQVQKGALVSAAEHASGVRYTESLQTTWTPPRHIARLTEDECDLVRKKWHILVDGDDIPPPIKSFAEMRFPPAILNSLKAKNIIRPTPIQVQAMPCILSGRDLIGIAFTGSGKTLTFTLPLVMLALEQEKKMPLIAKEGPFGVILGPSRELMRQTYEIVTHFTSSLFQAGFPEIRSLLCMGGQDKREQLDMIFKRGVHIVVATPGRLKDFLQSKKMHLDLCQYICLDEGDRMLDLGFDEEVAAIFNHFKHQRQTLLFSATMPQKFQDFAKQVLVRPILVNVGRAGAANLDVLQEVEYVKHEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVEAVSIHGGKDQVERNEAIDLFKRGDKDVLVATDIAAKGLDFPDIQHVINFDMPVEIENYVHRIGRTGRCGKTGVATTFINKNVPESALLDLKHLLVEAKQRVPPVLKALDDPMEHLQENATGSKGCAFCGGLGHRITDCPKLESNARKLNAGRRDYL 610          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|1173952758|gb|OQS00355.1| (DEAD/DEAH box RNA helicase [Thraustotheca clavata])

HSP 1 Score: 756.518 bits (1952), Expect = 0.000e+0
Identity = 360/544 (66.18%), Postives = 430/544 (79.04%), Query Frame = 0
Query:   93 SLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML-ISSGGYGGE 635
            SL++ + E+KK+RE           Q   E ++L EA+ VQ  AL SA ERA+G++Y++S+KT W PP H+  M++ +C   R KWHI+ +G D+PPPIK F +M+FP  I+ A+  K I +PTPIQVQ +P +L+GRD++GIAFTGSGKTMTF LPL+M  L +E KMP+   EGP G+IL PSREL  QTFE++  +  AL + GFP  R++LCIGG DKR Q+D + RQGVHI +ATPGR +D L+ KKM+L LC Y CLDE DRMLDLGFDEEVA I NHFK QRQTL+FSATMP K QDFAKE LVRP+LVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV AV+IHGGKDQ ER+EAI  FK G KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  V +S LLDLKHLL+EAKQRVPPVL ALEDP +       G +GCAFCGGLGHRITDCPK+D +AR++ +GRRD L   S GYGG+
Sbjct:   80 SLIDQSFEIKKRREEAGVDE-DTSTQSTTEVQLLHEASHVQKAALVSAAERAEGIRYAESIKTTWIPPKHIAKMTEEECDLVRSKWHILVDGEDIPPPIKTFEEMRFPPAILSALKAKNIVRPTPIQVQAIPCILAGRDIIGIAFTGSGKTMTFTLPLIMRVLEQEVKMPIVSREGPFGVILGPSRELMRQTFEIVKDFTSALFKAGFPELRSILCIGGQDKRDQLDLIYRQGVHIAIATPGRFKDFLNSKKMNLDLCEYICLDEGDRMLDLGFDEEVASIFNHFKSQRQTLIFSATMPQKFQDFAKEVLVRPILVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVAAVSIHGGKDQVERNEAIDAFKCGDKDVLVATDIAAKGLDFPDIQHVINFDMPIEIENYVHRIGRTGRCGKTGVATTFINKNVPESALLDLKHLLVEAKQRVPPVLRALEDPMETSESNATGSKGCAFCGGLGHRITDCPKLDANARKINAGRRDYLGGQSAGYGGD 622          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|673051467|ref|XP_008879694.1| (hypothetical protein H310_13826 [Aphanomyces invadans] >gi|574464723|gb|ETV91768.1| hypothetical protein H310_13826 [Aphanomyces invadans])

HSP 1 Score: 754.977 bits (1948), Expect = 0.000e+0
Identity = 360/539 (66.79%), Postives = 437/539 (81.08%), Query Frame = 0
Query:   88 TATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML 626
            T +  SLL+ + ++KKKRE  +        Q   E ++L EA+QVQ  AL SA E A GV+Y++S+K  WTPP H+  +++ +C   RKKWHI+ +G D+PPPIK+F +M++P  I++A+  K I +PTPIQVQ +P +LSGRD++GIAFTGSGKT+TF LPLVMLAL +EKKMP+   EGP G+IL PSREL  QT+E+++++  AL + GFP  R+LLC+GG DKR Q+D + ++GVHIVVATPGRL+D L  KKM+L LC+Y CLDE DRMLDLGFDEEVA I NHFK QRQTLLFSATMP K QDFAK+ LVRPVLVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV+AV+IHGGKDQ ER+EAI  FK   KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  V +S LLDLKHLL+EAKQRVPPVL+AL+DP +       G +GCAFCGGLGHRITDCPK++ +AR+L +GRRD L
Sbjct:   70 TRSTVSLLDQSFQLKKKRE-TEGVNEDERIQSTSEVQLLHEASQVQKVALVSAAEHASGVRYTESIKRTWTPPRHIARLTEDECDVVRKKWHILVDGDDIPPPIKSFAEMRYPPAILDALKAKNIVRPTPIQVQAMPCILSGRDIIGIAFTGSGKTLTFTLPLVMLALEQEKKMPIISKEGPFGVILGPSRELMRQTYEIVNHFTSALFKAGFPELRSLLCMGGQDKREQLDMIFKRGVHIVVATPGRLKDFLQSKKMNLDLCQYICLDEGDRMLDLGFDEEVASIFNHFKHQRQTLLFSATMPQKFQDFAKQVLVRPVLVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVEAVSIHGGKDQVERNEAIDMFKRRDKDVLVATDIAAKGLDFPDIQHVINFDMPVEIENYVHRIGRTGRCGKTGVATTFINKSVPESALLDLKHLLVEAKQRVPPVLKALDDPMEHSQENATGSKGCAFCGGLGHRITDCPKLESNARKLNAGRRDYL 607          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|566019517|gb|ETI42428.1| (hypothetical protein F443_12427, partial [Phytophthora parasitica P1569] >gi|568045169|gb|ETM42325.1| hypothetical protein L914_11985, partial [Phytophthora parasitica] >gi|570979320|gb|ETP40277.1| hypothetical protein F442_12348, partial [Phytophthora parasitica P10297])

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 377/605 (62.31%), Postives = 458/605 (75.70%), Query Frame = 0
Query:   52 VEARDQQERTDEDTDN-----------SGEPVADGILKSRLDLDAEVTATKRS---LLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGV------RGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLI-SSGGYGGE 635
            ++ R QQER+DED+ +           + +P A G   S   LD      +RS   LL+   EM+KK E       K + Q  QE  +L EA+ VQ  AL SA ERA+G+ Y +S+KT W PP  +  M++ +C A RKKWHI+ EG D+PPPIK+F  M+FP  I++A+  K I +PTPIQVQ +P +L+GRDM+GIAFTGSGKT+TF LPLVMLAL EEKKMP+ G EGP G+I+ PSREL  QTF+V+ ++   L + G+P  R+LLCIGG DKR Q + +  +GVHIVVATPGRL   L L++M+L LC+Y CLDE DRMLDLGFDEEVA   NHF  QRQTLLFSATMP K QDFAK+ LV+PVLVNVGRAGAANLDV+QEVE VK+DAKIVYLL+CLQKT+PPV+IFCERK DVD+I+EYL+LKGV+A +IHGGKDQ ER+EAI  FK G KDVLVATDVAAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  V +S LLDLKHLL+EAKQ VPPVL+ALEDP ++L  + +G+      +GCAFCGGLGHRITDCPK+D   R++G+G+RD L   S GYGG+
Sbjct:   40 LQERIQQERSDEDSGSDEDEQKSKRQKTSDPNA-GASPSSATLDEPPQPQQRSSVSLLDQAYEMRKKMEEQGVNQQKAQ-QDAQEVNMLKEASYVQKVALVSAHERAEGIHYKESMKTTWKPPRSIANMTQEECDAVRKKWHILVEGEDVPPPIKSFEYMRFPPAILDALKAKNIMRPTPIQVQAIPCILAGRDMIGIAFTGSGKTVTFTLPLVMLALEEEKKMPIIGHEGPFGLIVGPSRELMRQTFDVVKHFTTHLFKAGYPELRSLLCIGGEDKRQQSNLIASRGVHIVVATPGRLNHFLKLREMNLRLCKYICLDEGDRMLDLGFDEEVATTFNHFTSQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQDAKIVYLLECLQKTSPPVVIFCERKGDVDDIYEYLILKGVEAASIHGGKDQEERNEAIDLFKNGQKDVLVATDVAAKGLDFPDIKHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINKSVPESALLDLKHLLVEAKQTVPPVLKALEDPYEELERSGNGLSNATGTKGCAFCGGLGHRITDCPKVDSQVRKIGAGKRDFLAGKSEGYGGD 642          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|675199755|ref|XP_008908762.1| (hypothetical protein PPTG_14020 [Phytophthora parasitica INRA-310] >gi|568091436|gb|ETN06260.1| hypothetical protein PPTG_14020 [Phytophthora parasitica INRA-310] >gi|970627540|gb|KUF75373.1| DEAD-box ATP-dependent RNA helicase 35 [Phytophthora nicotianae])

HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0
Identity = 377/605 (62.31%), Postives = 458/605 (75.70%), Query Frame = 0
Query:   52 VEARDQQERTDEDTDN-----------SGEPVADGILKSRLDLDAEVTATKRS---LLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGV------RGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLI-SSGGYGGE 635
            ++ R QQER+DED+ +           + +P A G   S   LD      +RS   LL+   EM+KK E       K + Q  QE  +L EA+ VQ  AL SA ERA+G+ Y +S+KT W PP  +  M++ +C A RKKWHI+ EG D+PPPIK+F  M+FP  I++A+  K I +PTPIQVQ +P +L+GRDM+GIAFTGSGKT+TF LPLVMLAL EEKKMP+ G EGP G+I+ PSREL  QTF+V+ ++   L + G+P  R+LLCIGG DKR Q + +  +GVHIVVATPGRL   L L++M+L LC+Y CLDE DRMLDLGFDEEVA   NHF  QRQTLLFSATMP K QDFAK+ LV+PVLVNVGRAGAANLDV+QEVE VK+DAKIVYLL+CLQKT+PPV+IFCERK DVD+I+EYL+LKGV+A +IHGGKDQ ER+EAI  FK G KDVLVATDVAAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  V +S LLDLKHLL+EAKQ VPPVL+ALEDP ++L  + +G+      +GCAFCGGLGHRITDCPK+D   R++G+G+RD L   S GYGG+
Sbjct:   34 LQERIQQERSDEDSGSDEDEQKSKRQKTSDPNA-GASPSSATLDEPPQPQQRSSVSLLDQAYEMRKKMEEQGVNQQKAQ-QDAQEVNMLKEASYVQKVALVSAHERAEGIHYKESMKTTWKPPRSIANMTQEECDAVRKKWHILVEGEDVPPPIKSFEYMRFPPAILDALKAKNIMRPTPIQVQAIPCILAGRDMIGIAFTGSGKTVTFTLPLVMLALEEEKKMPIIGHEGPFGLIVGPSRELMRQTFDVVKHFTTHLFKAGYPELRSLLCIGGEDKRQQSNLIASRGVHIVVATPGRLNHFLKLREMNLRLCKYICLDEGDRMLDLGFDEEVATTFNHFTSQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQDAKIVYLLECLQKTSPPVVIFCERKGDVDDIYEYLILKGVEAASIHGGKDQEERNEAIDLFKNGQKDVLVATDVAAKGLDFPDIKHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINKSVPESALLDLKHLLVEAKQTVPPVLKALEDPYEELERSGNGLSNATGTKGCAFCGGLGHRITDCPKVDSQVRKIGAGKRDFLAGKSEGYGGD 636          
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|567985490|gb|ETL35830.1| (hypothetical protein L916_12077, partial [Phytophthora parasitica])

HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0
Identity = 377/605 (62.31%), Postives = 458/605 (75.70%), Query Frame = 0
Query:   52 VEARDQQERTDEDTDN-----------SGEPVADGILKSRLDLDAEVTATKRS---LLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGV------RGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLI-SSGGYGGE 635
            ++ R QQER+DED+ +           + +P A G   S   LD      +RS   LL+   EM+KK E       K + Q  QE  +L EA+ VQ  AL SA ERA+G+ Y +S+KT W PP  +  M++ +C A RKKWHI+ EG D+PPPIK+F  M+FP  I++A+  K I +PTPIQVQ +P +L+GRDM+GIAFTGSGKT+TF LPLVMLAL EEKKMP+ G EGP G+I+ PSREL  QTF+V+ ++   L + G+P  R+LLCIGG DKR Q + +  +GVHIVVATPGRL   L L++M+L LC+Y CLDE DRMLDLGFDEEVA   NHF  QRQTLLFSATMP K QDFAK+ LV+PVLVNVGRAGAANLDV+QEVE VK+DAKIVYLL+CLQKT+PPV+IFCERK DVD+I+EYL+LKGV+A +IHGGKDQ ER+EAI  FK G KDVLVATDVAAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN  V +S LLDLKHLL+EAKQ VPPVL+ALEDP ++L  + +G+      +GCAFCGGLGHRITDCPK+D   R++G+G+RD L   S GYGG+
Sbjct:   40 LQERIQQERSDEDSGSDEDEQKSKRQKTSDPNA-GASPSSATLDEPPQPQQRSSVSLLDQAYEMRKKMEEQGVNQQKAQ-QDAQEVNMLKEASYVQKVALVSAHERAEGIHYKESMKTTWKPPRSIANMTQEECDAVRKKWHILVEGEDVPPPIKSFEYMRFPPAILDALKAKNIMRPTPIQVQAIPCILAGRDMIGIAFTGSGKTVTFTLPLVMLALEEEKKMPIIGREGPFGLIVGPSRELMRQTFDVVKHFTTHLFKAGYPELRSLLCIGGEDKRQQSNMIASRGVHIVVATPGRLNHFLKLREMNLRLCKYICLDEGDRMLDLGFDEEVATTFNHFTSQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQDAKIVYLLECLQKTSPPVVIFCERKGDVDDIYEYLILKGVEAASIHGGKDQEERNEAIDLFKNGQKDVLVATDVAAKGLDFPDIKHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINKSVPESALLDLKHLLVEAKQTVPPVLKALEDPYEELERSGNGLSNATGTKGCAFCGGLGHRITDCPKVDSQVRKIGAGKRDFLAGKSEGYGGD 642          
The following BLAST results are available for this feature:
BLAST of EWM29109.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111629|gb|EWM29109.1|0.000e+0100.00dead deah box rna helicase [Nannochloropsis gadita... [more]
gi|299471815|emb|CBN79482.1|0.000e+069.72DEAD box helicase [Ectocarpus siliculosus][more]
gi|669170901|ref|XP_008620799.1|0.000e+062.16hypothetical protein SDRG_16370 [Saprolegnia dicli... [more]
gi|1173954298|gb|OQS01773.1|0.000e+061.84DEAD/DEAH box RNA helicase [Achlya hypogyna][more]
gi|698814034|ref|XP_009840046.1|0.000e+066.85hypothetical protein, variant 2 [Aphanomyces astac... [more]
gi|1173952758|gb|OQS00355.1|0.000e+066.18DEAD/DEAH box RNA helicase [Thraustotheca clavata][more]
gi|673051467|ref|XP_008879694.1|0.000e+066.79hypothetical protein H310_13826 [Aphanomyces invad... [more]
gi|566019517|gb|ETI42428.1|0.000e+062.31hypothetical protein F443_12427, partial [Phytopht... [more]
gi|675199755|ref|XP_008908762.1|0.000e+062.31hypothetical protein PPTG_14020 [Phytophthora para... [more]
gi|567985490|gb|ETL35830.1|0.000e+062.31hypothetical protein L916_12077, partial [Phytopht... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1516rna1516Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications