EWM29109.1, cds1513 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|585111629|gb|EWM29109.1| (dead deah box rna helicase [Nannochloropsis gaditana]) HSP 1 Score: 1305.43 bits (3377), Expect = 0.000e+0 Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0
Query: 1 MNGSSKRRRQEVDEEDEKLKALLQSSDDYVPYVSLKHRQGLSRNGKDAGHEVEARDQQERTDEDTDNSGEPVADGILKSRLDLDAEVTATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLISSGGYGGEY 636
MNGSSKRRRQEVDEEDEKLKALLQSSDDYVPYVSLKHRQGLSRNGKDAGHEVEARDQQERTDEDTDNSGEPVADGILKSRLDLDAEVTATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLISSGGYGGEY
Sbjct: 1 MNGSSKRRRQEVDEEDEKLKALLQSSDDYVPYVSLKHRQGLSRNGKDAGHEVEARDQQERTDEDTDNSGEPVADGILKSRLDLDAEVTATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLISSGGYGGEY 636
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|299471815|emb|CBN79482.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 816.224 bits (2107), Expect = 0.000e+0 Identity = 380/545 (69.72%), Postives = 458/545 (84.04%), Query Frame = 0
Query: 92 RSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLISSGGYGGEY 636
R+LLE +E+KK ++D +K K++E R+L EANQVQTNAL SA E A+G +Y+++L T W PP + R M++ DC R+KW I+ +G +PPPIK+FR+MK P P++ A+ KGI +PTPIQVQG+PV LSGRDM+GIAFTGSGKT+TF +PL+MLAL EE K+P+ GGEGP G+ILCPSRELA QTF+V+DY+C+ L RGGFP R +LCIGG DKR+QID +QRQGVH +VATPGR+ DLLH K+ LC+Y CLDE DRMLD+GFDEEV +IMNHFKQQRQTLLFSATMP K QDFAK+ LV+PVLVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV IFCE+K DVD+IHEYLLLKGVDAV+IHGGK+Q ER+EAI+ FK GVKDVL+ATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN VE+S LLDLKHLL+EA+QRVPPVL ALEDPDQ++ +DGV+GCAFCGGLGHRIT+CPKIDK A + +RD+L +GGYGG++
Sbjct: 117 RTLLEAAKELKKATANLDAGTIKQMRAKEEEHRMLKEANQVQTNALMSAAEVAKGTRYTEALTTSWRPPKYYRDMTEEDCDKLREKWSILVDGEKVPPPIKSFREMKLPDPMLAALEAKGIKRPTPIQVQGVPVALSGRDMIGIAFTGSGKTVTFSIPLIMLALEEEMKLPVVGGEGPFGVILCPSRELARQTFDVVDYFCKHLHRGGFPELRTVLCIGGEDKRSQIDPIQRQGVHCIVATPGRISDLLHTHKVHFDLCKYICLDEGDRMLDMGFDEEVQKIMNHFKQQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQEERNEAIKLFKEGVKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKMVEESALLDLKHLLMEAQQRVPPVLMALEDPDQEMD-EVDGVKGCAFCGGLGHRITNCPKIDKTASQKAGAQRDVLADTGGYGGDW 660
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|669170901|ref|XP_008620799.1| (hypothetical protein SDRG_16370 [Saprolegnia diclina VS20] >gi|530727532|gb|EQC25774.1| hypothetical protein SDRG_16370 [Saprolegnia diclina VS20]) HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0 Identity = 386/621 (62.16%), Postives = 466/621 (75.04%), Query Frame = 0
Query: 22 LLQSSDD--YVPYVSLKHRQGLSR-NGKDAGHEVEARDQQERTDEDTDNSGE---PVADGILKSRLDLDAEVTATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML-ISSGGYGGE 635
+L + DD YVP + + R + HE + E +DE + S E P D +L +A + SL++ + EMKK+RE + Q E ++L EA+QVQ AL SA ERA+G++Y++S+ T WTPP H+ M++ DC RKKWHI+ +G D+PPPIK+F DM+FP I+ A+ K I +PTPIQVQ +P +LSGRD++GIAFTGSGKTMTF LPLV+ AL +E KMP+ EGP G+IL PSREL QTFE++ ++ AL +GGFP R++LCIGG DKR Q+D + + GVHIVVATPGRL+D L+ KKM+L LC Y CLDE DRMLDLGFDEEVA I NHFK QRQTLLFSATMP K QDFAK+ LVRP+LVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV AV+IHGGKDQ ER+ AI FK G KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN V +S LLDLKHLL+EAKQRVPPVL ALEDP + G +GCAFCGGLGHRITDCPK+D +AR++ +GRRD L S GYGG+
Sbjct: 1 MLGTMDDGLYVPLKKRRQEEEARRLQRRKLVHEKLRQVDGEESDEAPEASDEAPGPQPDEVL------EAAPARSTMSLIDQSFEMKKRREEAG-VDEDIRVQTTSEVQLLHEASQVQKAALVSAAERAEGIRYTESMTTTWTPPRHIARMTEDDCENVRKKWHILVDGDDIPPPIKSFADMRFPPAILAALKAKNIVRPTPIQVQAIPCILSGRDIIGIAFTGSGKTMTFTLPLVLRALEQEVKMPIVAREGPFGVILGPSRELMRQTFEIVQHFTSALFKGGFPELRSILCIGGQDKREQLDLIFKAGVHIVVATPGRLKDFLNSKKMTLDLCEYICLDEGDRMLDLGFDEEVAAIFNHFKSQRQTLLFSATMPQKFQDFAKQVLVRPILVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVAAVSIHGGKDQVERNAAIDAFKVGAKDVLVATDIAAKGLDFPDIQHVINFDMPTEIENYVHRIGRTGRCGKTGVATTFINKNVPESALLDLKHLLVEAKQRVPPVLSALEDPMETSQANATGSKGCAFCGGLGHRITDCPKLDANARKINAGRRDYLGGQSAGYGGD 614
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|1173954298|gb|OQS01773.1| (DEAD/DEAH box RNA helicase [Achlya hypogyna]) HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0 Identity = 384/621 (61.84%), Postives = 460/621 (74.07%), Query Frame = 0
Query: 32 YVSLKHRQGLSRNGKDAGHEVEARDQQERT-------------DEDTDNSGEPVADGILKSRLDLDAEVTATKRS---LLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML-ISSGGYGGE 635
YV LK R+ E EAR QQ R E+ + EP A+ DL A A +RS L++ + EMKK+RE AQ E ++L EA+QVQ AL SA ERA+G++Y++S+ T WTPP H+ M++ + R KWHI+ +G D+PPPIK+F DM+FP I+ A+ K I +PTPIQVQ +P +LSGRD++GIAFTGSGKTMTF LPL++ AL +E KMP+ EGP G+IL PSREL QTFE++ ++ +AL + +P R++LCIGG DKR Q++ V R GVHIVVATPGRL+D L+ KK+SL LC Y CLDE DRMLDLGFDEEVA I NHFK QRQTLLFSATMP K QDFAK+ LVRPVLVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV AV+IHGGKDQ ER+ A+ FK G KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN V +S LLDLKHLL+EAKQRVPPVL ALEDP + G +GCAFCGGLGHRITDCPK+D +AR++ +GRRD L S GYGG+
Sbjct: 6 YVPLKKRR----------QEEEARRQQRRKLMHEKLRQIDGNESEEAPETAEPSAE-------DLPAVEEAPQRSTVSLIDQSFEMKKRREEAG-VDEDSRAQTTSEVQLLHEASQVQKAALVSAAERAEGIRYTESMVTTWTPPRHIARMTEEERDVVRAKWHILVDGDDIPPPIKSFADMRFPPAILTALKAKNIVRPTPIQVQAIPCILSGRDIIGIAFTGSGKTMTFTLPLILRALEQEVKMPIVSREGPFGVILGPSRELMRQTFEIIQHFTRALFQAKYPELRSILCIGGQDKREQLELVYRAGVHIVVATPGRLKDFLNAKKLSLDLCEYICLDEGDRMLDLGFDEEVAAIFNHFKAQRQTLLFSATMPQKFQDFAKQVLVRPVLVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVAAVSIHGGKDQVERNAAVDAFKAGAKDVLVATDIAAKGLDFPDIQHVINFDMPTEIENYVHRIGRTGRCGKTGVATTFINKNVPESALLDLKHLLVEAKQRVPPVLRALEDPLEASQTNATGSKGCAFCGGLGHRITDCPKLDANARKINAGRRDYLGGQSAGYGGD 608
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|698814034|ref|XP_009840046.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574104805|gb|ETV70332.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 365/546 (66.85%), Postives = 441/546 (80.77%), Query Frame = 0
Query: 82 DLDAEV-TATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML 626
D+DA T + SLL+ + ++KKKRE+ + Q E ++L EA+QVQ AL SA E A GV+Y++SL+T WTPP H+ +++ +C RKKWHI+ +G D+PPPIK+F +M+FP I+ ++ K I +PTPIQVQ +P +LSGRD++GIAFTGSGKT+TF LPLVMLAL +EKKMPL EGP G+IL PSREL QT+E++ ++ +L + GFP R+LLC+GG DKR Q+D + ++GVHIVVATPGRL+D L KKM L LC+Y CLDE DRMLDLGFDEEVA I NHFK QRQTLLFSATMP K QDFAK+ LVRP+LVNVGRAGAANLDV+QEVE VK +AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV+AV+IHGGKDQ ER+EAI FK G KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN V +S LLDLKHLL+EAKQRVPPVL+AL+DP + L G +GCAFCGGLGHRITDCPK++ +AR+L +GRRD L
Sbjct: 66 DVDAAAPTRSTVSLLDQSFQLKKKREN-EGVNEDDRIQSTSEVQLLHEASQVQKGALVSAAEHASGVRYTESLQTTWTPPRHIARLTEDECDLVRKKWHILVDGDDIPPPIKSFAEMRFPPAILNSLKAKNIIRPTPIQVQAMPCILSGRDLIGIAFTGSGKTLTFTLPLVMLALEQEKKMPLIAKEGPFGVILGPSRELMRQTYEIVTHFTSSLFQAGFPEIRSLLCMGGQDKREQLDMIFKRGVHIVVATPGRLKDFLQSKKMHLDLCQYICLDEGDRMLDLGFDEEVAAIFNHFKHQRQTLLFSATMPQKFQDFAKQVLVRPILVNVGRAGAANLDVLQEVEYVKHEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVEAVSIHGGKDQVERNEAIDLFKRGDKDVLVATDIAAKGLDFPDIQHVINFDMPVEIENYVHRIGRTGRCGKTGVATTFINKNVPESALLDLKHLLVEAKQRVPPVLKALDDPMEHLQENATGSKGCAFCGGLGHRITDCPKLESNARKLNAGRRDYL 610
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|1173952758|gb|OQS00355.1| (DEAD/DEAH box RNA helicase [Thraustotheca clavata]) HSP 1 Score: 756.518 bits (1952), Expect = 0.000e+0 Identity = 360/544 (66.18%), Postives = 430/544 (79.04%), Query Frame = 0
Query: 93 SLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML-ISSGGYGGE 635
SL++ + E+KK+RE Q E ++L EA+ VQ AL SA ERA+G++Y++S+KT W PP H+ M++ +C R KWHI+ +G D+PPPIK F +M+FP I+ A+ K I +PTPIQVQ +P +L+GRD++GIAFTGSGKTMTF LPL+M L +E KMP+ EGP G+IL PSREL QTFE++ + AL + GFP R++LCIGG DKR Q+D + RQGVHI +ATPGR +D L+ KKM+L LC Y CLDE DRMLDLGFDEEVA I NHFK QRQTL+FSATMP K QDFAKE LVRP+LVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV AV+IHGGKDQ ER+EAI FK G KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN V +S LLDLKHLL+EAKQRVPPVL ALEDP + G +GCAFCGGLGHRITDCPK+D +AR++ +GRRD L S GYGG+
Sbjct: 80 SLIDQSFEIKKRREEAGVDE-DTSTQSTTEVQLLHEASHVQKAALVSAAERAEGIRYAESIKTTWIPPKHIAKMTEEECDLVRSKWHILVDGEDIPPPIKTFEEMRFPPAILSALKAKNIVRPTPIQVQAIPCILAGRDIIGIAFTGSGKTMTFTLPLIMRVLEQEVKMPIVSREGPFGVILGPSRELMRQTFEIVKDFTSALFKAGFPELRSILCIGGQDKRDQLDLIYRQGVHIAIATPGRFKDFLNSKKMNLDLCEYICLDEGDRMLDLGFDEEVASIFNHFKSQRQTLIFSATMPQKFQDFAKEVLVRPILVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVAAVSIHGGKDQVERNEAIDAFKCGDKDVLVATDIAAKGLDFPDIQHVINFDMPIEIENYVHRIGRTGRCGKTGVATTFINKNVPESALLDLKHLLVEAKQRVPPVLRALEDPMETSESNATGSKGCAFCGGLGHRITDCPKLDANARKINAGRRDYLGGQSAGYGGD 622
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|673051467|ref|XP_008879694.1| (hypothetical protein H310_13826 [Aphanomyces invadans] >gi|574464723|gb|ETV91768.1| hypothetical protein H310_13826 [Aphanomyces invadans]) HSP 1 Score: 754.977 bits (1948), Expect = 0.000e+0 Identity = 360/539 (66.79%), Postives = 437/539 (81.08%), Query Frame = 0
Query: 88 TATKRSLLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGVRGCAFCGGLGHRITDCPKIDKDARRLGSGRRDML 626
T + SLL+ + ++KKKRE + Q E ++L EA+QVQ AL SA E A GV+Y++S+K WTPP H+ +++ +C RKKWHI+ +G D+PPPIK+F +M++P I++A+ K I +PTPIQVQ +P +LSGRD++GIAFTGSGKT+TF LPLVMLAL +EKKMP+ EGP G+IL PSREL QT+E+++++ AL + GFP R+LLC+GG DKR Q+D + ++GVHIVVATPGRL+D L KKM+L LC+Y CLDE DRMLDLGFDEEVA I NHFK QRQTLLFSATMP K QDFAK+ LVRPVLVNVGRAGAANLDV+QEVE VK++AKIVYLL+CLQKTAPPV+IFCERK DVD+IHEYLLLKGV+AV+IHGGKDQ ER+EAI FK KDVLVATD+AAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN V +S LLDLKHLL+EAKQRVPPVL+AL+DP + G +GCAFCGGLGHRITDCPK++ +AR+L +GRRD L
Sbjct: 70 TRSTVSLLDQSFQLKKKRE-TEGVNEDERIQSTSEVQLLHEASQVQKVALVSAAEHASGVRYTESIKRTWTPPRHIARLTEDECDVVRKKWHILVDGDDIPPPIKSFAEMRYPPAILDALKAKNIVRPTPIQVQAMPCILSGRDIIGIAFTGSGKTLTFTLPLVMLALEQEKKMPIISKEGPFGVILGPSRELMRQTYEIVNHFTSALFKAGFPELRSLLCMGGQDKREQLDMIFKRGVHIVVATPGRLKDFLQSKKMNLDLCQYICLDEGDRMLDLGFDEEVASIFNHFKHQRQTLLFSATMPQKFQDFAKQVLVRPVLVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVEAVSIHGGKDQVERNEAIDMFKRRDKDVLVATDIAAKGLDFPDIQHVINFDMPVEIENYVHRIGRTGRCGKTGVATTFINKSVPESALLDLKHLLVEAKQRVPPVLKALDDPMEHSQENATGSKGCAFCGGLGHRITDCPKLESNARKLNAGRRDYL 607
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|566019517|gb|ETI42428.1| (hypothetical protein F443_12427, partial [Phytophthora parasitica P1569] >gi|568045169|gb|ETM42325.1| hypothetical protein L914_11985, partial [Phytophthora parasitica] >gi|570979320|gb|ETP40277.1| hypothetical protein F442_12348, partial [Phytophthora parasitica P10297]) HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0 Identity = 377/605 (62.31%), Postives = 458/605 (75.70%), Query Frame = 0
Query: 52 VEARDQQERTDEDTDN-----------SGEPVADGILKSRLDLDAEVTATKRS---LLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGV------RGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLI-SSGGYGGE 635
++ R QQER+DED+ + + +P A G S LD +RS LL+ EM+KK E K + Q QE +L EA+ VQ AL SA ERA+G+ Y +S+KT W PP + M++ +C A RKKWHI+ EG D+PPPIK+F M+FP I++A+ K I +PTPIQVQ +P +L+GRDM+GIAFTGSGKT+TF LPLVMLAL EEKKMP+ G EGP G+I+ PSREL QTF+V+ ++ L + G+P R+LLCIGG DKR Q + + +GVHIVVATPGRL L L++M+L LC+Y CLDE DRMLDLGFDEEVA NHF QRQTLLFSATMP K QDFAK+ LV+PVLVNVGRAGAANLDV+QEVE VK+DAKIVYLL+CLQKT+PPV+IFCERK DVD+I+EYL+LKGV+A +IHGGKDQ ER+EAI FK G KDVLVATDVAAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN V +S LLDLKHLL+EAKQ VPPVL+ALEDP ++L + +G+ +GCAFCGGLGHRITDCPK+D R++G+G+RD L S GYGG+
Sbjct: 40 LQERIQQERSDEDSGSDEDEQKSKRQKTSDPNA-GASPSSATLDEPPQPQQRSSVSLLDQAYEMRKKMEEQGVNQQKAQ-QDAQEVNMLKEASYVQKVALVSAHERAEGIHYKESMKTTWKPPRSIANMTQEECDAVRKKWHILVEGEDVPPPIKSFEYMRFPPAILDALKAKNIMRPTPIQVQAIPCILAGRDMIGIAFTGSGKTVTFTLPLVMLALEEEKKMPIIGHEGPFGLIVGPSRELMRQTFDVVKHFTTHLFKAGYPELRSLLCIGGEDKRQQSNLIASRGVHIVVATPGRLNHFLKLREMNLRLCKYICLDEGDRMLDLGFDEEVATTFNHFTSQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQDAKIVYLLECLQKTSPPVVIFCERKGDVDDIYEYLILKGVEAASIHGGKDQEERNEAIDLFKNGQKDVLVATDVAAKGLDFPDIKHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINKSVPESALLDLKHLLVEAKQTVPPVLKALEDPYEELERSGNGLSNATGTKGCAFCGGLGHRITDCPKVDSQVRKIGAGKRDFLAGKSEGYGGD 642
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|675199755|ref|XP_008908762.1| (hypothetical protein PPTG_14020 [Phytophthora parasitica INRA-310] >gi|568091436|gb|ETN06260.1| hypothetical protein PPTG_14020 [Phytophthora parasitica INRA-310] >gi|970627540|gb|KUF75373.1| DEAD-box ATP-dependent RNA helicase 35 [Phytophthora nicotianae]) HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0 Identity = 377/605 (62.31%), Postives = 458/605 (75.70%), Query Frame = 0
Query: 52 VEARDQQERTDEDTDN-----------SGEPVADGILKSRLDLDAEVTATKRS---LLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGV------RGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLI-SSGGYGGE 635
++ R QQER+DED+ + + +P A G S LD +RS LL+ EM+KK E K + Q QE +L EA+ VQ AL SA ERA+G+ Y +S+KT W PP + M++ +C A RKKWHI+ EG D+PPPIK+F M+FP I++A+ K I +PTPIQVQ +P +L+GRDM+GIAFTGSGKT+TF LPLVMLAL EEKKMP+ G EGP G+I+ PSREL QTF+V+ ++ L + G+P R+LLCIGG DKR Q + + +GVHIVVATPGRL L L++M+L LC+Y CLDE DRMLDLGFDEEVA NHF QRQTLLFSATMP K QDFAK+ LV+PVLVNVGRAGAANLDV+QEVE VK+DAKIVYLL+CLQKT+PPV+IFCERK DVD+I+EYL+LKGV+A +IHGGKDQ ER+EAI FK G KDVLVATDVAAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN V +S LLDLKHLL+EAKQ VPPVL+ALEDP ++L + +G+ +GCAFCGGLGHRITDCPK+D R++G+G+RD L S GYGG+
Sbjct: 34 LQERIQQERSDEDSGSDEDEQKSKRQKTSDPNA-GASPSSATLDEPPQPQQRSSVSLLDQAYEMRKKMEEQGVNQQKAQ-QDAQEVNMLKEASYVQKVALVSAHERAEGIHYKESMKTTWKPPRSIANMTQEECDAVRKKWHILVEGEDVPPPIKSFEYMRFPPAILDALKAKNIMRPTPIQVQAIPCILAGRDMIGIAFTGSGKTVTFTLPLVMLALEEEKKMPIIGHEGPFGLIVGPSRELMRQTFDVVKHFTTHLFKAGYPELRSLLCIGGEDKRQQSNLIASRGVHIVVATPGRLNHFLKLREMNLRLCKYICLDEGDRMLDLGFDEEVATTFNHFTSQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQDAKIVYLLECLQKTSPPVVIFCERKGDVDDIYEYLILKGVEAASIHGGKDQEERNEAIDLFKNGQKDVLVATDVAAKGLDFPDIKHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINKSVPESALLDLKHLLVEAKQTVPPVLKALEDPYEELERSGNGLSNATGTKGCAFCGGLGHRITDCPKVDSQVRKIGAGKRDFLAGKSEGYGGD 636
BLAST of EWM29109.1 vs. NCBI_GenBank
Match: gi|567985490|gb|ETL35830.1| (hypothetical protein L916_12077, partial [Phytophthora parasitica]) HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0 Identity = 377/605 (62.31%), Postives = 458/605 (75.70%), Query Frame = 0
Query: 52 VEARDQQERTDEDTDN-----------SGEPVADGILKSRLDLDAEVTATKRS---LLEVTEEMKKKREHMDPTLLKLEAQKQQEQRILGEANQVQTNALQSAVERAQGVQYSQSLKTGWTPPSHVRAMSKADCAAFRKKWHIICEGVDLPPPIKNFRDMKFPAPIMEAMARKGITKPTPIQVQGLPVLLSGRDMVGIAFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPVGIILCPSRELAGQTFEVLDYYCQALGRGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGRLRDLLHLKKMSLSLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLLFSATMPLKIQDFAKETLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVYLLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGGKDQAERDEAIREFKGGVKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRTGRCGKTGVATTFINAEVEQSTLLDLKHLLIEAKQRVPPVLEALEDPDQDLTGAIDGV------RGCAFCGGLGHRITDCPKIDKDARRLGSGRRDMLI-SSGGYGGE 635
++ R QQER+DED+ + + +P A G S LD +RS LL+ EM+KK E K + Q QE +L EA+ VQ AL SA ERA+G+ Y +S+KT W PP + M++ +C A RKKWHI+ EG D+PPPIK+F M+FP I++A+ K I +PTPIQVQ +P +L+GRDM+GIAFTGSGKT+TF LPLVMLAL EEKKMP+ G EGP G+I+ PSREL QTF+V+ ++ L + G+P R+LLCIGG DKR Q + + +GVHIVVATPGRL L L++M+L LC+Y CLDE DRMLDLGFDEEVA NHF QRQTLLFSATMP K QDFAK+ LV+PVLVNVGRAGAANLDV+QEVE VK+DAKIVYLL+CLQKT+PPV+IFCERK DVD+I+EYL+LKGV+A +IHGGKDQ ER+EAI FK G KDVLVATDVAAKGLDFP+I+HVINFDMP EIENYVHRIGRTGRCGKTGVATTFIN V +S LLDLKHLL+EAKQ VPPVL+ALEDP ++L + +G+ +GCAFCGGLGHRITDCPK+D R++G+G+RD L S GYGG+
Sbjct: 40 LQERIQQERSDEDSGSDEDEQKSKRQKTSDPNA-GASPSSATLDEPPQPQQRSSVSLLDQAYEMRKKMEEQGVNQQKAQ-QDAQEVNMLKEASYVQKVALVSAHERAEGIHYKESMKTTWKPPRSIANMTQEECDAVRKKWHILVEGEDVPPPIKSFEYMRFPPAILDALKAKNIMRPTPIQVQAIPCILAGRDMIGIAFTGSGKTVTFTLPLVMLALEEEKKMPIIGREGPFGLIVGPSRELMRQTFDVVKHFTTHLFKAGYPELRSLLCIGGEDKRQQSNMIASRGVHIVVATPGRLNHFLKLREMNLRLCKYICLDEGDRMLDLGFDEEVATTFNHFTSQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQDAKIVYLLECLQKTSPPVVIFCERKGDVDDIYEYLILKGVEAASIHGGKDQEERNEAIDLFKNGQKDVLVATDVAAKGLDFPDIKHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINKSVPESALLDLKHLLVEAKQTVPPVLKALEDPYEELERSGNGLSNATGTKGCAFCGGLGHRITDCPKVDSQVRKIGAGKRDFLAGKSEGYGGD 642 The following BLAST results are available for this feature:
BLAST of EWM29109.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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