EWM29157.1, cds1512 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29157.1 vs. NCBI_GenBank
Match: gi|585111677|gb|EWM29157.1| (hypothetical protein Naga_100007g60 [Nannochloropsis gaditana]) HSP 1 Score: 716.842 bits (1849), Expect = 0.000e+0 Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0
Query: 1 MCFPIDLGKAHVLIGERIQSSYRTIASLFCDMRCSLLRSSCCCLLLSAVVLCRGWISANAEVAIVASPEAAGITQVARMVMEVRGGLKPARGSKGKNNGKISNGNNAGTKLGPKAPPPVHVDDDDDDDEEQEEEWGSEEDEDCMEEEEEFGELAEEREGKYYESGRSGGSRQRNEWHYADRRRRLAARRRASHGMADLFKGAAKITSSSVGKVAGLFQPNKYVSLREVLGVWKVKQKITEPGGEVERCEATLEIRKDGTVVTFFEGKELVSEFLFKERQWPRSCIIEFEARAFQGPYDREPQPKFYKGYVRRSLMNAGSVRLEGKIYDVQGTFFWRQKRQVGKFRAVKR 349
MCFPIDLGKAHVLIGERIQSSYRTIASLFCDMRCSLLRSSCCCLLLSAVVLCRGWISANAEVAIVASPEAAGITQVARMVMEVRGGLKPARGSKGKNNGKISNGNNAGTKLGPKAPPPVHVDDDDDDDEEQEEEWGSEEDEDCMEEEEEFGELAEEREGKYYESGRSGGSRQRNEWHYADRRRRLAARRRASHGMADLFKGAAKITSSSVGKVAGLFQPNKYVSLREVLGVWKVKQKITEPGGEVERCEATLEIRKDGTVVTFFEGKELVSEFLFKERQWPRSCIIEFEARAFQGPYDREPQPKFYKGYVRRSLMNAGSVRLEGKIYDVQGTFFWRQKRQVGKFRAVKR
Sbjct: 1 MCFPIDLGKAHVLIGERIQSSYRTIASLFCDMRCSLLRSSCCCLLLSAVVLCRGWISANAEVAIVASPEAAGITQVARMVMEVRGGLKPARGSKGKNNGKISNGNNAGTKLGPKAPPPVHVDDDDDDDEEQEEEWGSEEDEDCMEEEEEFGELAEEREGKYYESGRSGGSRQRNEWHYADRRRRLAARRRASHGMADLFKGAAKITSSSVGKVAGLFQPNKYVSLREVLGVWKVKQKITEPGGEVERCEATLEIRKDGTVVTFFEGKELVSEFLFKERQWPRSCIIEFEARAFQGPYDREPQPKFYKGYVRRSLMNAGSVRLEGKIYDVQGTFFWRQKRQVGKFRAVKR 349
BLAST of EWM29157.1 vs. NCBI_GenBank
Match: gi|298710352|emb|CBJ31970.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 149.828 bits (377), Expect = 2.348e-37 Identity = 71/152 (46.71%), Postives = 97/152 (63.82%), Query Frame = 0
Query: 198 LFKGAAKITSSSVGKVAGLFQPNKYVSLREVLGVWKVKQKITEPGGEVERCEATLEIRKDGTVVTFFEGKELVSEFLFKERQWPRSCIIEFEARAFQGPYDREPQPKFYKGYVRRSLMNAGSVRLEGKIYDVQGTFFWRQKRQVGKFRAVKR 349
+ K K T S+ + QP K V L E+L WK++Q + +P G V +C AT+E R+DGTV T F+G+E VS+F F+ WPR+C IEFEA+AFQGP+D EP K YKG R L++ + LEG IYDV G W+++ + GKF A +R
Sbjct: 250 VMKSVGKATGKSMKAMVHALQP-KSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRR 400
BLAST of EWM29157.1 vs. NCBI_GenBank
Match: gi|219114913|ref|XP_002178252.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409987|gb|EEC49917.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 79.337 bits (194), Expect = 3.992e-13 Identity = 61/196 (31.12%), Postives = 92/196 (46.94%), Query Frame = 0
Query: 168 GGSRQRNEWH--YADRRRRLAARRRASHGMADLFKGAAKITSSSV-------GKVAGLFQPNKYVSLREVLGVWKVKQK-ITEPGGEVERCEATLEIRKDGTVVTFFEGKELVSEFLFKERQWPRSCIIEFEARAFQGPYDREPQPKFYKGYVRRSLMNAGSVRLEGKIYDVQGTFFWR----QKRQVGKFRAVKR 349
GG + +E H +D + + S ++ K + +T+ +V GK A K V L E+LG+W++ Q+ I P LE+ VVT +GK + F ++P+S +EF AR F D +P FYKGYV R L + ++++GKIY V+ T WR + VG F A KR
Sbjct: 51 GGYQDYDEEHDDNSDEQDSRGISKSTSSTLSYFAKKSLSLTTKAVTASAQQSGKAAYWAIRPKQVDLNELLGLWRLDQQVILYPNDGPLESSTNLELTPKAVVVTL-DGKPVPFSLTFTPARFPKSAKVEFTARTFIPIEDEQPPLFFYKGYVHRKLADLSVIKIKGKIYRVEST-GWRGQGIKHVIVGTFLARKR 244 The following BLAST results are available for this feature:
BLAST of EWM29157.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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