EWM29180.1, cds1495 (CDS) Nannochloropsis gaditana

Overview
NameEWM29180.1
Unique Namecds1495
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:780484..781968 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29180.1
Productsucrose transporter
Orig transcript idgnl|cribi|Naga_100007g83.6507.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:780484..781968 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR011701MFS
Homology
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|585111700|gb|EWM29180.1| (sucrose transporter [Nannochloropsis gaditana])

HSP 1 Score: 988.793 bits (2555), Expect = 0.000e+0
Identity = 494/494 (100.00%), Postives = 494/494 (100.00%), Query Frame = 0
Query:    1 MWLPGRNNLSSTTGKSEVTPFLPPLQASMDSTEVDSDSEESRSVKCSPAQLYPTFAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGVNAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNASVTSSGKRALFGMKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPEDTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVSTLAFAAATFLGFFFLRPGDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYCSLFRSLSEVLPFALQGLIGSALLSVFQGSARSVFAAASVLMAAAAVHTYFFVLDVQDVEEYEEEI 494
            MWLPGRNNLSSTTGKSEVTPFLPPLQASMDSTEVDSDSEESRSVKCSPAQLYPTFAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGVNAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNASVTSSGKRALFGMKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPEDTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVSTLAFAAATFLGFFFLRPGDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYCSLFRSLSEVLPFALQGLIGSALLSVFQGSARSVFAAASVLMAAAAVHTYFFVLDVQDVEEYEEEI
Sbjct:    1 MWLPGRNNLSSTTGKSEVTPFLPPLQASMDSTEVDSDSEESRSVKCSPAQLYPTFAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGVNAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNASVTSSGKRALFGMKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPEDTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVSTLAFAAATFLGFFFLRPGDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYCSLFRSLSEVLPFALQGLIGSALLSVFQGSARSVFAAASVLMAAAAVHTYFFVLDVQDVEEYEEEI 494          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|857979365|emb|CEO94884.1| (hypothetical protein PBRA_003697 [Plasmodiophora brassicae])

HSP 1 Score: 142.51 bits (358), Expect = 1.166e-33
Identity = 120/452 (26.55%), Postives = 208/452 (46.02%), Query Frame = 0
Query:   55 FAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGVNAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREK-------RFIPQLYELFNASVTSSGKRALFGMKSLPKA---VRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPE----DTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVSTLAFAAATFLGFFFLRPGDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYCSLFRSLSEVLPFALQGLIGSALLSVFQGSARSVFAAASVLMAAAAVHTYFFVLDVQDVEEYEE 492
            F+ +   + W+V   Y TP L++  L+   VGLVW M   +     PL+   SD  ++ +GRRRP +          L+L + A RIG   GD  G    AL++A+   +     ++ +    R L  D +  +     +A+ ++   LG+  G+ LG+ NL +   +  +G ++QI++ ++A +L +  S T   A +        R  P      +    S   RA   M  LP A   V      N  AW SF +   YG+ ++G+ I+GG  +       +I  +YE G+++ +F    +++  ++ S  L   T+K+G+  ++++         L    +R      A+AL A  G+P A S   PW IVT  +  S ++ LY + F +LS+ LP  +   +   +L  F  +  SVF  ++V  + AA+     ++D    E Y E
Sbjct:   21 FSAMASSLAWAVQAGYSTPELLSLGLSRPLVGLVWLMGPFSGIIVQPLVGMLSDNCRSRFGRRRPVILCAACSTATALVLFSQASRIGQHLGDTSGTV--ALAVAIAAFMALDCSINAMMAPTRALVADIVPEEQQDEASAYISIHDGLGKATGYLLGSVNLERE--VRGIGGELQIVYSIAALVLLVYCSITFFLATDDCGPCTAARDRPA-----SGGGLSVVWRAFAAMPHLPPAAMRVFFVQFCNTFAWFSFMV---YGTDYFGNHIYGGSAQAPIGSKAII--LYEEGLRTGNFALFALSISSAVFSRFLMPATSKLGLVPVYIAAELMLMVGLLLMPIIR--SSAMAVALYAAFGIPFAVSNTIPWMIVTREISSSPDAGLYSATF-NLSQCLPQIITSALSGPVLIHFHDNTASVFVMSAVGASLAAL-LIVILIDEPPHESYRE 454          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|330800133|ref|XP_003288093.1| (hypothetical protein DICPUDRAFT_97918 [Dictyostelium purpureum] >gi|325081854|gb|EGC35355.1| hypothetical protein DICPUDRAFT_97918 [Dictyostelium purpureum])

HSP 1 Score: 133.265 bits (334), Expect = 1.048e-29
Identity = 108/450 (24.00%), Postives = 220/450 (48.89%), Query Frame = 0
Query:   54 TFAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGVNAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNASVTSSGKRALFGMKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPE--DTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVSTLAFAAATFLGFF--FLRPGDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYC---SLFRSLSEVL-----PFALQGLIGSALLSVFQGSARSVFAAASVLMAAAAVHTYFFVLDVQDVEEYE 491
            T +FLGVQ  W++  A+ TP+ +   ++   V  +W    ++     PL+   +D +++ +GRR+P++ +  +    GL+L++ A+ IG W GD  GQ+  A+++A++G  +  +  + +Q   R L  D          ++ F+L   +G ++G+ +G+ NL K   + ++    + LF LS  +L +  + TL+   E+R++ ++ +  + S  +  K+ L G  ++P  ++        +W  +     + + + G  ++GG+P   +     + ++ GV+  S G  + + V   +SL +  +   VGIK +++    F       FF  FL   D+  ++ L A  G+P A     P++IV + V+ +E+S L+    ++F  + ++L      F +    G+ + S+  GS  S+ A+A  L      H +       D+EE +
Sbjct:  177 TISFLGVQFGWALQIAFSTPLFLELGVSQNVVSYIWLAGPISGLIVQPLVGVLTDRSESKFGRRKPFILIGSIFISVGLILISNAESIGTWVGDSEGQKSFAIAVAIIGFWILDLSNNAVQAPCRALLVDVAAPSQQSLGSSLFSLMLGIGNLLGYMMGSINLVKV--VPFMKTDTRALFTLSILVLLICVTMTLVFVVEERYV-RVND--DKSSENPLKQMLKGFINMPSYMKRLCSVQFFSWIGWFSFILFVTTWVGVNVYGGNPNAPEGSPERTKFQEGVRWGSLGLTISSGVTIGISLLIPILIRFVGIKKIYI----FGNILQCIFFALFLAIHDKIGSILLIAATGIPWAVVMILPFSIVGMGVQDNESSGLHIGTLNIFIVVPQMLVSLGISFIIDLFKGNVVYSLVTGSIASLVASALCLRLIIPSHGH----AQNDIEEIQ 613          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|1013937613|gb|KYQ91309.1| (suc1-sucrose proton symporter [Dictyostelium lacteum])

HSP 1 Score: 120.553 bits (301), Expect = 1.418e-25
Identity = 115/494 (23.28%), Postives = 228/494 (46.15%), Query Frame = 0
Query:    8 NLSSTTGKSEVTPFLPPLQASM--DSTEVDSDSEESRSVKCSPAQLYPTFAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYM---AMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGV-NAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNASVTSSGKRALFGMKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPEDTGVID--SIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVSTLAFAAATFLGFFFLRPGDRGAALALSACLGLPLAASYQCPWAIVTVAVRR----SENSALYCSLFRSLSEVLPFALQGLIGSALLSVFQGSARSVFAAASVLMAAAAVHTYFFVLDVQDVEE 489
            +L      ++V  +L   Q S+  +S ++ +DS +          L  + +FLGVQ  W++  AY TP+ +   ++   V  +W    ++     P++   SD +++ +GRR+PY+    +F++V   GLLL++ A  +G   GD    ++ ++  A++G  +  +  + +Q   R L  D + + + QG+ ++ F++    G ++G+ +G+  L       +L   I+ LF LS  +L      TL+  +EK+F        NA+  +       G+  +P  ++        +W  +     + + + G  ++GG+P+     +    ++ GV+  S G    +++  ++S  +  +   VGIK ++       A TFL FFFL+   + AAL L    G+P +     P+AIV +        +ENS L   +  ++  VLP  L  +  S ++ +F G+        S+    A +  +  ++    +EE
Sbjct:   43 DLDEPKDLTDVEKYLISNQGSLQINSEQIINDSYKKEISIFKLIVL--SLSFLGVQFGWALQIAYSTPLFLELGVSKFWVSFIWIAGPVSGLIVQPIVGVLSDRSESKFGRRKPYIFFGTIFIVV---GLLLISNAQSLGSLLGDSKDTKKLSIFFAIIGFWVLDLSNNAVQGPCRALLVD-VASPSQQGLGSSLFSIMLGFGNLLGYLMGSLRLSLI--FPFLKTDIRALFTLSILVLIFCIFFTLICIQEKKF-----SRINANTENPFSVLFKGILRMPPYLKRLCCVQFFSWIGWFSFILFATTWVGVNVYGGNPDAPEGTEERERFQLGVRIGSLGLTFSSLLNILISFLIPLLFKLVGIKIVYFVGTLIQAVTFLLFFFLQ--SKIAALVLITFTGIPWSIVMIVPFAIVGLGANETQYSTENSGLQIGIL-NIFIVLPQLLVAVGISFVIEIFNGNVAYSLLTGSISSFIATLLIFRIIIPQDRIEE 520          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|545706527|ref|XP_005705580.1| (sucrose transporter, GPH family [Galdieria sulphuraria] >gi|452822037|gb|EME29060.1| sucrose transporter, GPH family [Galdieria sulphuraria])

HSP 1 Score: 120.168 bits (300), Expect = 1.997e-25
Identity = 114/415 (27.47%), Postives = 178/415 (42.89%), Query Frame = 0
Query:   38 SEESRSVKCSPAQLYP----TFAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGVNAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRF-IPQLYELFNASVTSSGKRALFGMKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGD---PEDTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWV-STLAFAAATFLGFFFLRPG-DRGAALALS-------ACLGLPLAASYQCPWAIVTVAVRRSENS--ALYCSLFR 433
            S+E R     P   +     T A  G+Q C++V   + +P L    L  E V L W    L+     P++   SD  Q+ +GRRRP++    +     L LL  AD IG  FGD    Q   L++A+    L    +  IQ   R L TD +  +     NA FA+   +G +VG  +G+  L     L +     Q LF L+A +L +T S       E    +    E F A    S +  L  + + P+      +  L  W  F  +F Y S + G  ++ G+   P ++  + + Y+ GV+  + G  L A V    S  L  +  K G+  M+  S L  A    + FF   P  +R  +L+L        A  G+P +++   PWA++  AV R + +   LY + F 
Sbjct:   66 SDEERKRAREPVDKFRLIMLTLAMAGIQCCYAVQIGHGSPTLEKLGLPTELVSLAWLAGPLSGIIVQPIIGILSDSCQHPFGRRRPFLVAGTVFTSLALSLLGNADVIGYLFGDSVDSQPVGLAIAISAFFLLDFSIQAIQAPLRALLTDIVPEEQQAEGNALFAMMTGVGNLVGTAMGSLQLSFM--LPFFVSDSQALFSLAAVILIITVSLCCYYVHETPVGVLSRSESF-AQRFHSDQGILKLLVNAPRPFWRVFIVQLFTWYGFFTVFVYASVWVGRNVYNGNGAFPLNSPQLQA-YDEGVRLGNLGLSLDAAVAMGYSTILPRLIEKYGMGFMYCFSQLVEAFCLVVPFFIRGPSQERSPSLSLKVLTLSILALFGIPWSSTMTIPWALMGTAVYRVDPNRIGLYSTFFN 476          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|302747284|gb|ADL63117.1| (sucrose transporter 2y [Ipomoea batatas] >gi|302747292|gb|ADL63121.1| sucrose transporter 2y [Ipomoea batatas])

HSP 1 Score: 119.013 bits (297), Expect = 3.130e-25
Identity = 120/497 (24.14%), Postives = 221/497 (44.47%), Query Frame = 0
Query:   26 QASMDSTEVDSDSEESRSVKCSPAQ--LYPTFAFL----GVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQ--QRNALSMAVMGLILSQVGLDGIQCMERGLCTDTL--DADALQGVNAFFALQGSLGRVVGFGLGA-ANLGKAPGLSYLGD------QIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNAS----VTSSGKRALFG-----MKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPEDTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKV-GIKTMW----------------VSTLAFAAATFLGFFFLRP---GDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYCSL-FRSLSEVLPFALQGLIGSALLSVFQGSARSVFAAASVLMAAAAV 475
              +M + + +  S +      +P Q  L+          GVQ  W++  + +TP +    +  +   L+W    ++     P++   SD   + +GRRRP++A    +    + L+ +A  IG   GD  G+  +  A+++ V+G  +  V  + +Q   R L  D     A  ++  N+FF+   ++G ++G+  G+ ++L K    S           ++  F +SA LL   T+  L T  E+    ++ E  +       T   K   FG     ++ LP+++ +  +   L W ++   F + + + G  ++GG+PE +   + +YE+GVQ+ S G +L +VV  +MSLG+  +  +  G+K +W                VS +A  +  F     L P   G R  AL L + LG+PLA +Y  P+A+ ++    S  S    SL   +L  V+P     L+G     +F G     F   ++  A + +
Sbjct:    3 NGAMKTKQTNKSSLQVHQAAAAPPQTRLWKIIMVAAIAAGVQFGWAIQLSLLTPYVQLLGIKHQYAPLIWLCGPISGMIVQPMVGYYSDNCTSRFGRRRPFIAAGASLVTIAVFLIGFAADIGHASGDPVGKVIKPRAIAVFVVGFWILDVANNMLQGPCRALLADLSGGRAKRMRTANSFFSFFMAIGNILGYAAGSWSSLHKVFPFSNTKACDVYCANLKSCFFISAALLLSVTTLALSTVSEQELSKEVDEADDPDDEKLPTEKSKLPFFGEIFGALRDLPRSMWILLLVTCLNWIAWFPFFLFDTDWMGKEVYGGNPEGSANDNRLYEQGVQAGSLGLMLNSVVLGVMSLGVELIARRFGGVKKLWAGVNFILAACLALTIMVSKMADKSRRFAPNGDLMPPSAGARAGALTLFSVLGIPLAVTYSIPFALASI-FSSSTGSGQGLSLGVLNLGIVVPQMFVSLVGGPWDQLFGGGNLPAFIVGAISAALSGI 498          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|302747290|gb|ADL63120.1| (sucrose transporter 2x [Ipomoea batatas])

HSP 1 Score: 119.013 bits (297), Expect = 3.646e-25
Identity = 115/458 (25.11%), Postives = 209/458 (45.63%), Query Frame = 0
Query:   59 GVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQ--QRNALSMAVMGLILSQVGLDGIQCMERGLCTDTL--DADALQGVNAFFALQGSLGRVVGFGLGA-ANLGKAPGLSYLGD------QIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNAS----VTSSGKRALFG-----MKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPEDTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKV-GIKTMW----------------VSTLAFAAATFLGFFFLRP---GDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYCSL-FRSLSEVLPFALQGLIGSALLSVFQGSARSVFAAASVLMAAAAV 475
            GVQ  W++  + +TP +    +  +   L+W    ++     P++   SD   + +GRRRP++A    +    + L+ +A  IG   GD  G+  +  A+++ V+G  +  V  + +Q   R L  D     A  ++  N+FF+   ++G ++G+  G+ ++L K    S           ++  F +SA LL   T+  L T  E+    ++ E  +       T   K   FG     ++ LP+++ +  +   L W ++   F + + + G  ++GG+PE +   + +YE+GVQ+ S G +L +VV  +MSLG+  +  +  G+K +W                VS +A  +  F     L P   G R  AL L + LG+PLA +Y  P+A+ ++    S  S    SL   +L  V+P     L+G     +F G     F   ++  A + +
Sbjct:   41 GVQFGWAIQLSLLTPYVQLLGIKHQYAPLIWLCGPISGMIVQPMVGYYSDNCTSRFGRRRPFIAAGASLVTIAVFLIGFAADIGHASGDPVGKVIKPRAIAVFVVGFWILDVANNMLQGPCRALLADLSGGRAKRMRTANSFFSFFMAIGNILGYAAGSWSSLHKVFPFSNTKACDVYCANLKSCFFISAALLLSVTTLALSTVSEQELSKEVDEADDPDDEKLPTEKSKLPFFGEIFGALRDLPRSMWILLLVTCLNWIAWFPFFLFDTDWMGKEVYGGNPEGSANDNRLYEQGVQAGSLGLMLNSVVLGVMSLGVELIARRFGGVKKLWAGVNFILAACLALTIMVSKMADKSRRFAPNGDLMPPSAGARAGALTLFSVLGIPLAVTYSIPFALASI-FSSSTGSGQGLSLGVLNLGIVVPQMFVSLVGGPWDQLFGGGNLPAFIVGAISAALSGI 497          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|470264535|ref|XP_004361233.1| (sucrose proton symporter [Dictyostelium fasciculatum] >gi|328875017|gb|EGG23382.1| sucrose proton symporter [Dictyostelium fasciculatum])

HSP 1 Score: 119.783 bits (299), Expect = 4.272e-25
Identity = 102/407 (25.06%), Postives = 199/407 (48.89%), Query Frame = 0
Query:   54 TFAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGV-NAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNASVTSSGKRALFGMKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPE--DTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVSTLAFAAATFLGFFFLRPGDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYCSLFRSLSEVLPFALQGLIGSALLSVFQG 457
            T +FLGVQ  W++  A+ TP+ +   +    V  +W    ++     P++   SD +++  GRRRP++    +    GLLL++ A  IG  FG     +  ++ +A++G  +  +  + +Q   R L  D +   + QG+ ++ F++   +G ++G+ +G+ NL KA  L ++   I+ LF +S   L L  S TL++ +EKR+   + +L      +  +  L G++ +P  ++   +    +W  +     Y + + G  ++ GDP   +      ++++GV+  S G ++ + V  + SL +  +   VGIK ++ +  A     F  FF  +   +  AL L    G+P +     P+ IV + +  SE+     +L  ++  V+P  L  L  S ++S+F G
Sbjct:  256 TVSFLGVQFGWALQIAFSTPLFLELGVPSFWVSFIWMAGPISGLIVQPIVGVVSDVSESKHGRRRPFIFFGTIFIAVGLLLVSNAQSIGSIFG--SDSKDASIFIAIIGFWILDLSNNVVQAPCRALLVD-VAPTSQQGLGSSLFSIMLGIGNLLGYFMGSLNLVKA--LPFMKTDIRALFTISIITLLLCISMTLISVKEKRYSKPINDL--TPKVNPFQAILNGIRDMPMFLKRVCIVQFFSWIGWFCFVLYVTTWVGVNVYQGDPNAPEGSPGRDLFQQGVRRGSLGLMMSSGVSIVTSLLIPTLIRLVGIKYVYFAGNAIQTLLFALFFICK--SKLWALLLIGATGIPWSVVMVLPFTIVGLGISSSESGLHMGTL--NVFVVIPQLLVSLGISFVISLFGG 651          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|66818455|ref|XP_642887.1| (hypothetical protein DDB_G0276801 [Dictyostelium discoideum AX4] >gi|60470932|gb|EAL68902.1| hypothetical protein DDB_G0276801 [Dictyostelium discoideum AX4])

HSP 1 Score: 117.857 bits (294), Expect = 1.965e-24
Identity = 110/449 (24.50%), Postives = 217/449 (48.33%), Query Frame = 0
Query:   54 TFAFLGVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDIGGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGV-NAFFALQGSLGRVVGFGLGAANLGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRFIPQLYELFNASVTSSGKRALFGMKSLPKAV-RLAAVS--NLLAWSSFALLFYYGSYFYGSFIFGGDPEDTGVIDS--IYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVSTLAFAAATFLGFFFLRPGDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYC---SLFRSLSEVLPFALQGLI-----GSALLSVFQGSARSVFAAASVLMAAAAVHTYFFVLDVQDVE 488
            T  FLGVQ  W++  A+ TP+ +   +  + V  +W    ++     PL+   +D ++  +GRR+P++ +  +    GL+L++ A+  G +FGD   ++  A+S+A++G  +  +  + +Q   R L  D + A + Q + ++ F+L    G ++G+ +G+ +L +   + ++    + LF LS  +L      TL    E+++I ++ E  + SV +  K    G+  +P  + RL AV   + + W SF L     + + G  +FGGDP      DS  +++ GV+  S    + + +   +SL + F+   + +K +++         F  F+F+    +  +L L A  G+P A     P++IV + V  +E+S L     ++F  + +++     GLI     G+ + S+  GS  S FA           H    + D++++ 
Sbjct:  210 TICFLGVQFGWALQIAFSTPLFLELGVEQKWVSYIWLAGPISGLIVQPLVGVITDRSECRFGRRKPFILIGSVFISIGLVLISNAETFGSYFGDSEQKKSIAISIAIVGFWILDLSNNAVQAPCRALLVD-IAAPSQQSLGSSLFSLMLGTGNLLGYMMGSIDLVRM--VPFMKTDTRALFTLSIMVLLFCVVMTLGFVTEEQYI-RVNE--DQSVENPLKTMFKGIVKMPTYLQRLCAVQFFSWIGWFSFVLFI---TTWVGVNVFGGDPNAPEYSDSRILFQDGVRWGSLSLTISSGITIAVSLLIPFLVKFIDMKYIYIGGNLLQCIFFALFYFVE--SKIGSLLLIASTGIPWAIVMILPFSIVGMGVEDNESSGLNIGTLNIFVVVPQMVVSLGIGLILDLSKGNVVYSLLTGSVASFFATLFCFRIIIPKHHGHPIGDIEEIH 647          
BLAST of EWM29180.1 vs. NCBI_GenBank
Match: gi|1070963702|gb|OEL29417.1| (Sucrose transport protein SUT1 [Dichanthelium oligosanthes])

HSP 1 Score: 114.005 bits (284), Expect = 1.720e-23
Identity = 105/416 (25.24%), Postives = 176/416 (42.31%), Query Frame = 0
Query:   59 GVQMCWSVAYAYITPILVTFNLNIETVGLVWCMSSLASCATVPLLSAASDFTQNSWGRRRPYMAMFLLVGGGGLLLLAYADRIGVWFGDI-------GGQQRNALSMAVMGLILSQVGLDGIQCMERGLCTDTLDADALQGVNAFFALQGSLGRVVGFGLGAAN-------LGKAPGLSYLGDQIQILFLLSAFLLFLTTSTTLLTAREKRFIPQ-LYELFNASVTSSGKRALF-GMKSLPKAVRLAAVSNLLAWSSFALLFYYGSYFYGSFIFGGDPEDTGVIDSIYERGVQSASFGFLLMAVVGSMMSLGLGFVTAKVGIKTMWVST-----LAFAAATFLGFFFLR-------------PGDRGAALALSACLGLPLAASYQCPWAIVTVAVRRSENSALYCSLFRSLSEVLP 440
            GVQ  W++  + +TP + T  L+      +W    +A     PL+   SD     WGRRRP++    L+    ++++ ++  IG   GD         G + +A  + V+G  L     + +Q   R L  D          N+ F    +LG ++G+  G+ N         K          ++  FL++   L    + TL+ A+E  F  + L    N  V  +G  A+F G K+LP  +    +   L W S+     Y + + G  I+ GDP+      + ++ GV+  SFG LL ++V    S  +  +  K+G + +WVS+     +A AA   + F+ L+             P  +   L L A LG+PLA  Y  P+A+              C+   ++S VLP
Sbjct:   46 GVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGLVVQPLVGLYSDKCTARWGRRRPFIMTGCLLICIAVVVVGFSSDIGAALGDTKEECSLYHGPRWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGQHGPSSANSIFCSWMALGNILGYSSGSTNNWHKWFPFLKTKACCEACANLKGAFLVAVVFLIFCLTITLIFAKEVPFRNENLPTKANGEVEPTGPLAVFKGFKNLPPGMPSVLLVTGLTWLSWFPFILYDTDWMGREIYHGDPKGNTAQIAAFDEGVRVGSFGLLLNSIVLGFSSFLIEPMCRKLGPRLVWVSSNFMVCVAMAATALISFWSLKDYHGYVQDAITANPSIKAVCLVLFALLGVPLAILYSVPFAVTAQLAASKGGGQGLCTGVLNISIVLP 461          
The following BLAST results are available for this feature:
BLAST of EWM29180.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111700|gb|EWM29180.1|0.000e+0100.00sucrose transporter [Nannochloropsis gaditana][more]
gi|857979365|emb|CEO94884.1|1.166e-3326.55hypothetical protein PBRA_003697 [Plasmodiophora b... [more]
gi|330800133|ref|XP_003288093.1|1.048e-2924.00hypothetical protein DICPUDRAFT_97918 [Dictyosteli... [more]
gi|1013937613|gb|KYQ91309.1|1.418e-2523.28suc1-sucrose proton symporter [Dictyostelium lacte... [more]
gi|545706527|ref|XP_005705580.1|1.997e-2527.47sucrose transporter, GPH family [Galdieria sulphur... [more]
gi|302747284|gb|ADL63117.1|3.130e-2524.14sucrose transporter 2y [Ipomoea batatas] >gi|30274... [more]
gi|302747290|gb|ADL63120.1|3.646e-2525.11sucrose transporter 2x [Ipomoea batatas][more]
gi|470264535|ref|XP_004361233.1|4.272e-2525.06sucrose proton symporter [Dictyostelium fasciculat... [more]
gi|66818455|ref|XP_642887.1|1.965e-2424.50hypothetical protein DDB_G0276801 [Dictyostelium d... [more]
gi|1070963702|gb|OEL29417.1|1.720e-2325.24Sucrose transport protein SUT1 [Dichanthelium olig... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1498rna1498Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications