EWM29219.1, cds1491 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29219.1 vs. NCBI_GenBank
Match: gi|585111739|gb|EWM29219.1| (hypothetical protein Naga_100007g87 [Nannochloropsis gaditana]) HSP 1 Score: 362.459 bits (929), Expect = 6.460e-127 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MPIESAAELQASSSLFGKECVDANLAFYEQKKKNPDPQACEAAGKDVLACWETLRAKIKAKSEASFQAYAECLEMTGNNLKKCANLHEDLLKSVSEKEAGAVVRIEEARVRSPLLGDYPDDSTEIIIKEEFRVEKYLFWTRRFRHMQREDWDQNYPIENCPSQPFLDLGLKSYIE 175
MPIESAAELQASSSLFGKECVDANLAFYEQKKKNPDPQACEAAGKDVLACWETLRAKIKAKSEASFQAYAECLEMTGNNLKKCANLHEDLLKSVSEKEAGAVVRIEEARVRSPLLGDYPDDSTEIIIKEEFRVEKYLFWTRRFRHMQREDWDQNYPIENCPSQPFLDLGLKSYIE
Sbjct: 1 MPIESAAELQASSSLFGKECVDANLAFYEQKKKNPDPQACEAAGKDVLACWETLRAKIKAKSEASFQAYAECLEMTGNNLKKCANLHEDLLKSVSEKEAGAVVRIEEARVRSPLLGDYPDDSTEIIIKEEFRVEKYLFWTRRFRHMQREDWDQNYPIENCPSQPFLDLGLKSYIE 175
BLAST of EWM29219.1 vs. NCBI_GenBank
Match: gi|731357289|ref|XP_010690126.1| (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Beta vulgaris subsp. vulgaris] >gi|1108980681|ref|XP_019107449.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Beta vulgaris subsp. vulgaris] >gi|870849491|gb|KMT01739.1| hypothetical protein BVRB_9g211910 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 55.4546 bits (132), Expect = 5.794e-7 Identity = 30/82 (36.59%), Postives = 40/82 (48.78%), Query Frame = 0
Query: 2 PIESAAELQASSSLFGKECVDANLAFYEQKKKNPDPQACEAAGKDVLACWETLRAKIKAKSEASFQAYAECLEMTGNNLKKC 83
PI ++A L ASS G C D NLAF + KKK+P+P+ C G+ V C +L + K AY C+ N C
Sbjct: 10 PIPTSAVLMASSKHIGLRCRDENLAFLKCKKKDPNPEKCLDKGQQVTRCVFSLLRDLHQKCTKEMDAYGSCMYYHTNEFDLC 91
BLAST of EWM29219.1 vs. NCBI_GenBank
Match: gi|729365468|ref|XP_010546912.1| (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Tarenaya hassleriana]) HSP 1 Score: 55.0694 bits (131), Expect = 8.112e-7 Identity = 32/92 (34.78%), Postives = 43/92 (46.74%), Query Frame = 0
Query: 2 PIESAAELQASSSLFGKECVDANLAFYEQKKKNPDPQACEAAGKDVLACWETLRAKIKAKSEASFQAYAECLEMTGNNLKKCANLHEDLLKS 93
PI ++A L AS+ G C N+AF + KK +P+P+ C G+DV C L I K AYA C+ N C N + KS
Sbjct: 11 PIPTSAVLTASAKHIGIRCRSENVAFLKCKKSDPNPEKCLDKGRDVTRCVLGLLKDIHQKCTKEMDAYAGCMYYYTNEFDLCRNEQQAFEKS 102 The following BLAST results are available for this feature:
BLAST of EWM29219.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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