EWM30481.1, cds148 (CDS) Nannochloropsis gaditana

Overview
NameEWM30481.1
Unique Namecds148
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:383396..383625 +
Alignment locationCM002455.1:383704..383907 +
Alignment locationCM002455.1:383974..384058 +

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Properties
Property NameValue
Protein idEWM30481.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100013g74.9769.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:383396..383625 +
CM002455.1supercontigCM002455.1:383704..383907 +
CM002455.1supercontigCM002455.1:383974..384058 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30481.1 vs. NCBI_GenBank
Match: gi|585113145|gb|EWM30481.1| (hypothetical protein Naga_100013g74 [Nannochloropsis gaditana])

HSP 1 Score: 350.517 bits (898), Expect = 2.967e-122
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 
Query:    1 MEKSCRDSEKDSTGDEKEEGVNICTLLLPLLVLGLGRTTLSMSLLRRLGWTFELACLLLVQNVTRASNGKGREQSAPQDDLVSADQRSTQSRLSLTSLMCPISASVEHFPQTMGFPVPLAFLPSSESFPSVTAATACSSLKGNKMELWVNFNNYQLFELSIRRGRMSQGMTL 172
            MEKSCRDSEKDSTGDEKEEGVNICTLLLPLLVLGLGRTTLSMSLLRRLGWTFELACLLLVQNVTRASNGKGREQSAPQDDLVSADQRSTQSRLSLTSLMCPISASVEHFPQTMGFPVPLAFLPSSESFPSVTAATACSSLKGNKMELWVNFNNYQLFELSIRRGRMSQGMTL
Sbjct:    1 MEKSCRDSEKDSTGDEKEEGVNICTLLLPLLVLGLGRTTLSMSLLRRLGWTFELACLLLVQNVTRASNGKGREQSAPQDDLVSADQRSTQSRLSLTSLMCPISASVEHFPQTMGFPVPLAFLPSSESFPSVTAATACSSLKGNKMELWVNFNNYQLFELSIRRGRMSQGMTL 172
The following BLAST results are available for this feature:
BLAST of EWM30481.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113145|gb|EWM30481.1|2.967e-122100.00hypothetical protein Naga_100013g74 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna148rna148Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications