EWM29139.1, cds1477 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|585111659|gb|EWM29139.1| (macrophage erythroblast attacher [Nannochloropsis gaditana]) HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 Query: 1 MNSLNDLLDVEQQLVEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCYGMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVYSQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 MNSLNDLLDVEQQLVEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCYGMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVYSQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV Sbjct: 1 MNSLNDLLDVEQQLVEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCYGMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVYSQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|1025202496|ref|XP_016426474.1| (PREDICTED: macrophage erythroblast attacher-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 165.236 bits (417), Expect = 1.901e-45 Identity = 103/309 (33.33%), Postives = 150/309 (48.54%), Query Frame = 0 Query: 4 LNDLLDVEQQL--------VEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCY--GMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVY---SQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 + DL+++E L +EH++ A LAWC D+ SRLR++ S LEF L Q+F+E++RQ R+ A+ +A +HFS G QL EV+Q M LA P D + Y L RW+ L F + R + G + FT +QA L+A+KTP C Y + T + NPDCPVC+ LA LP++HC NS L C +GE M+ NPPM+LPNG VY S ++R+ +++V CPRT++ F S+ +Y++ Sbjct: 61 IEDLVNIEMFLTAKEVEESLEHQETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRMDAVRHARKHFSQA---------------------------EGGQLDEVRQVMGMLAF--PSDTHISPYKDLLDPARWKMLIQQFRYDNYRLHQLGNNSVFTI---TLQAGLSAIKTPQC------------------YKDDGTSK----NPDCPVCSKSLNKLAQPLPMAHCANSRLVCKISGEVMNENNPPMMLPNGYVYGYNSLLSIRQ---------DDKVVCPRTKEVFNFSQAEKVYIM 306
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|1020428108|ref|XP_016131886.1| (PREDICTED: macrophage erythroblast attacher isoform X3 [Sinocyclocheilus grahami] >gi|1024971616|ref|XP_016307246.1| PREDICTED: macrophage erythroblast attacher isoform X3 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 165.622 bits (418), Expect = 3.031e-45 Identity = 103/309 (33.33%), Postives = 150/309 (48.54%), Query Frame = 0 Query: 4 LNDLLDVEQQL--------VEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCY--GMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVY---SQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 + DL+++E L +EH++ A LAWC D+ SRLR++ S LEF L Q+F+E++RQ R+ A+ +A +HFS G QL EV+Q M LA P D + Y L RW+ L F + R + G + FT +QA L+A+KTP C Y + T + NPDCPVC+ LA LP++HC NS L C +GE M+ NPPM+LPNG VY S ++R+ +++V CPRT++ F S+ +Y++ Sbjct: 103 IEDLVNIEMFLTAKEVEESLEHQETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRMDAVRHARKHFSQA---------------------------EGGQLDEVRQVMGMLAF--PSDTHISPYKDLLDPARWKMLIQQFRYDNYRLHQLGNNSVFTI---TLQAGLSAIKTPQC------------------YKDDGTSK----NPDCPVCSKSLNKLAQPLPMAHCANSRLVCKISGEVMNENNPPMMLPNGYVYGYNSLLSIRQ---------DDKVVCPRTKEVFNFSQAEKVYIM 348
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|1101523578|ref|XP_018927399.1| (PREDICTED: macrophage erythroblast attacher isoform X1 [Cyprinus carpio] >gi|1101523580|ref|XP_018927400.1| PREDICTED: macrophage erythroblast attacher isoform X2 [Cyprinus carpio] >gi|1101523582|ref|XP_018927401.1| PREDICTED: macrophage erythroblast attacher isoform X3 [Cyprinus carpio]) HSP 1 Score: 166.777 bits (421), Expect = 3.492e-45 Identity = 102/309 (33.01%), Postives = 149/309 (48.22%), Query Frame = 0 Query: 4 LNDLLDVEQQL--------VEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCY--GMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVY---SQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 + DL+++E L +EH++ A LAWC D+ SRLR++ S LEF L Q+F+E++RQ R+ A+ +A +HFS G QL EV+Q M LA P D + Y L RW+ L F + R + G + FT +QA L+A+KTP C + E + NPDCPVC+ LA LP++HC NS L C +GE M+ NPPM+LPNG VY S ++R+ +++V CPRT++ F S+ +Y++ Sbjct: 151 IEDLVNIEMFLTAKEVEESLEHQETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRMDAVRHARKHFSQA---------------------------EGGQLDEVRQVMGMLAF--PSDTHISPYKDLLDPARWKMLIQQFRYDNYRLHQLGNNSVFTI---TLQAGLSAIKTPQCYK----------------------EDGTSKNPDCPVCSKSLNKLAQPLPMAHCANSRLVCKISGEVMNENNPPMMLPNGYVYGYNSLLSIRQ---------DDKVVCPRTKEVFNFSQAEKVYIM 396
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|1020428078|ref|XP_016131885.1| (PREDICTED: macrophage erythroblast attacher isoform X2 [Sinocyclocheilus grahami]) HSP 1 Score: 166.392 bits (420), Expect = 4.415e-45 Identity = 103/309 (33.33%), Postives = 150/309 (48.54%), Query Frame = 0 Query: 4 LNDLLDVEQQL--------VEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCY--GMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVY---SQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 + DL+++E L +EH++ A LAWC D+ SRLR++ S LEF L Q+F+E++RQ R+ A+ +A +HFS G QL EV+Q M LA P D + Y L RW+ L F + R + G + FT +QA L+A+KTP C Y + T + NPDCPVC+ LA LP++HC NS L C +GE M+ NPPM+LPNG VY S ++R+ +++V CPRT++ F S+ +Y++ Sbjct: 142 IEDLVNIEMFLTAKEVEESLEHQETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRMDAVRHARKHFSQA---------------------------EGGQLDEVRQVMGMLAF--PSDTHISPYKDLLDPARWKMLIQQFRYDNYRLHQLGNNSVFTI---TLQAGLSAIKTPQC------------------YKDDGTSK----NPDCPVCSKSLNKLAQPLPMAHCANSRLVCKISGEVMNENNPPMMLPNGYVYGYNSLLSIRQ---------DDKVVCPRTKEVFNFSQAEKVYIM 387
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|1024971614|ref|XP_016307245.1| (PREDICTED: macrophage erythroblast attacher isoform X2 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 166.007 bits (419), Expect = 5.230e-45 Identity = 103/309 (33.33%), Postives = 150/309 (48.54%), Query Frame = 0 Query: 4 LNDLLDVEQQL--------VEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCY--GMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVY---SQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 + DL+++E L +EH++ A LAWC D+ SRLR++ S LEF L Q+F+E++RQ R+ A+ +A +HFS G QL EV+Q M LA P D + Y L RW+ L F + R + G + FT +QA L+A+KTP C Y + T + NPDCPVC+ LA LP++HC NS L C +GE M+ NPPM+LPNG VY S ++R+ +++V CPRT++ F S+ +Y++ Sbjct: 142 IEDLVNIEMFLTAKEVEESLEHQETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRMDAVRHARKHFSQA---------------------------EGGQLDEVRQVMGMLAF--PSDTHISPYKDLLDPARWKMLIQQFRYDNYRLHQLGNNSVFTI---TLQAGLSAIKTPQC------------------YKDDGTSK----NPDCPVCSKSLNKLAQPLPMAHCANSRLVCKISGEVMNENNPPMMLPNGYVYGYNSLLSIRQ---------DDKVVCPRTKEVFNFSQAEKVYIM 387
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|1020428053|ref|XP_016131884.1| (PREDICTED: macrophage erythroblast attacher isoform X1 [Sinocyclocheilus grahami] >gi|1024971612|ref|XP_016307244.1| PREDICTED: macrophage erythroblast attacher isoform X1 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 166.007 bits (419), Expect = 6.182e-45 Identity = 103/309 (33.33%), Postives = 150/309 (48.54%), Query Frame = 0 Query: 4 LNDLLDVEQQL--------VEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCY--GMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVY---SQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 + DL+++E L +EH++ A LAWC D+ SRLR++ S LEF L Q+F+E++RQ R+ A+ +A +HFS G QL EV+Q M LA P D + Y L RW+ L F + R + G + FT +QA L+A+KTP C Y + T + NPDCPVC+ LA LP++HC NS L C +GE M+ NPPM+LPNG VY S ++R+ +++V CPRT++ F S+ +Y++ Sbjct: 151 IEDLVNIEMFLTAKEVEESLEHQETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRMDAVRHARKHFSQA---------------------------EGGQLDEVRQVMGMLAF--PSDTHISPYKDLLDPARWKMLIQQFRYDNYRLHQLGNNSVFTI---TLQAGLSAIKTPQC------------------YKDDGTSK----NPDCPVCSKSLNKLAQPLPMAHCANSRLVCKISGEVMNENNPPMMLPNGYVYGYNSLLSIRQ---------DDKVVCPRTKEVFNFSQAEKVYIM 396
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|957832724|ref|XP_014666387.1| (PREDICTED: macrophage erythroblast attacher-like [Priapulus caudatus]) HSP 1 Score: 162.155 bits (409), Expect = 7.823e-45 Identity = 95/291 (32.65%), Postives = 140/291 (48.11%), Query Frame = 0 Query: 9 DVEQQLVEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCYGMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVYSQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 +VE+ L H D L+WC D+ S+LR+L S LEF L +Q+F+E++R+ RL A+ +A ++F L GEQL VQ+ M LA P D V Y +L RWQ+L F +E + Y + ++ +QA L+ALKTP C E+ NPDCPVC+ LA LP +HC S L C +G+ ++ N PM+LPNG VY + A+ + G ++TCPRT+ +F S + ++V+ Sbjct: 25 EVEESLANH-DTTECLSWCYDNKSKLRKLKSNLEFNLRQQEFIELIRKNLRLQAVNHARKYFV---------------------------NLEGEQLCHVQRTMGLLAF--PPDTEVYPYRELLDPTRWQQLVKEFRSENFKLYQLNN-YSVFTVTLQAGLSALKTPQCY------------------------HEDTMNPDCPVCSQYLNDLASKLPFAHCSQSRLVCHLSGKPLNEHNHPMMLPNGYVYGENALLSMAVENGG----KITCPRTKQAFMASDLEKVFVM 256
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|938058170|gb|KPP61905.1| (hypothetical protein Z043_119950, partial [Scleropages formosus]) HSP 1 Score: 161.384 bits (407), Expect = 8.302e-45 Identity = 98/305 (32.13%), Postives = 146/305 (47.87%), Query Frame = 0 Query: 6 DLLDVEQQL--------VEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCYGMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVY---SQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 DL+++E L +E ++ A LAWC D+ SRLR++ S LEF L Q+F+E++RQ R+ A+ +A +HFS G QL EV+Q M LA P D + Y L RW+ L F + R + + + +QA L+A+KTP C + E ++ NPDCPVC+ LA LP++HC NS L C +GE M+ NPPM+LPNG VY S ++R+ +++V CPRT++ F S+ +Y++ Sbjct: 1 DLVNIEMFLTAKEVEESLERQETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRMDAVRHARKHFS---------------------------QAEGGQLDEVRQVMGMLAF--PSDTHISPYKDLLDPARWKMLIQQFRYDNYRLHQLGNN-SVFTITLQAGLSAIKTPQCYK----------------------EDGSSKNPDCPVCSKSLNKLAQPLPMAHCANSRLVCKISGEVMNENNPPMMLPNGYVYGYNSLLSIRQ---------DDKVVCPRTKEVFNFSQAEKVYIM 244
BLAST of EWM29139.1 vs. NCBI_GenBank
Match: gi|1012209006|ref|XP_016014783.1| (PREDICTED: macrophage erythroblast attacher isoform X4 [Rousettus aegyptiacus]) HSP 1 Score: 165.622 bits (418), Expect = 1.027e-44 Identity = 105/309 (33.98%), Postives = 153/309 (49.51%), Query Frame = 0 Query: 4 LNDLLDVEQQL--------VEHRDCAGALAWCADHSSRLRRLGSPLEFKLHKQQFLEMVRQKDRLGALEYASQHFSPQNLQSSATSMAPRGSGIAFTNASANSGLSGEQLVEVQQAMATLALGDPEDCRVPDYSQLFAVERWQELGALFSAEARRCY--GMTTKFTALEACIQAALTALKTPSCRRLERGEAMSGNAESQETYSCETTEQENNYNPDCPVCADPGRSLAVALPLSHCGNSYLTCACTGEAMDAANPPMLLPNGRVY---SQRAVREHLTSSDGCGENRVTCPRTRDSFPLSKVRNIYVV 299 + DL+++E L +E R+ A LAWC D+ SRLR++ S LEF L Q+F+E+VRQ RL A+ +A +HFS G QL EV+QAM LA P D V Y L RW+ L F + R + G ++ FT +QA L+A+KTP C + G+ S+ +PDCPVC+ LA LP++HC NS L C +G+ M+ NPPM+LPNG VY S ++R+ +++V CPRT+++F S+ +Y++ Sbjct: 151 IEDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRVQEFIELVRQNKRLDAVRHARKHFSQAE---------------------------GSQLDEVRQAMGMLAF--PPDTHVSPYKDLLDPARWRMLIQQFRYDNYRLHQLGNSSVFTL---TLQAGLSAIKTPQCYK--------GDGSSK--------------SPDCPVCSRSLNQLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGHVYGYNSLLSIRQ---------DDKVVCPRTKETFHFSQAEKVYIM 396 The following BLAST results are available for this feature:
BLAST of EWM29139.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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