EWM29173.1, cds1467 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|585111693|gb|EWM29173.1| (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
Query: 1 MRKSISLKVKHPYRKEFLSSIVLLSQLNSFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 255
MRKSISLKVKHPYRKEFLSSIVLLSQLNSFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE
Sbjct: 1 MRKSISLKVKHPYRKEFLSSIVLLSQLNSFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 255
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|585111691|gb|EWM29171.1| (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 480.33 bits (1235), Expect = 3.160e-170 Identity = 230/249 (92.37%), Postives = 239/249 (95.98%), Query Frame = 0
Query: 7 LKVKHPYRKEFLSSIVLLSQLNSFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 255
L++ +++ S+ V+L + +FWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE
Sbjct: 54 LQLMAEFQRVLDSANVILPR--NFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 300
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|585111692|gb|EWM29172.1| (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 295.049 bits (754), Expect = 3.274e-98 Identity = 141/162 (87.04%), Postives = 150/162 (92.59%), Query Frame = 0
Query: 6 SLKVKHPYRKEFLSSIVLLSQLNSFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVII 167
L++ +++ S+ V+L + +FWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKV I
Sbjct: 53 ELQLMAEFQRVLDSANVILPR--NFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVRI 212
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|551628289|ref|XP_005794125.1| (hypothetical protein EMIHUDRAFT_431773 [Emiliania huxleyi CCMP1516] >gi|485648790|gb|EOD41696.1| hypothetical protein EMIHUDRAFT_431773 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 75.0998 bits (183), Expect = 2.096e-12 Identity = 58/206 (28.16%), Postives = 97/206 (47.09%), Query Frame = 0
Query: 36 HESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDA---FFIRHYPCLCLGFEDGSENYSPVVYRRLTHLN-TKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHS 237
H SR L R+L A HV ++ + L D+AWR + R+++ V+G E A F+ H CL PV+ + H+ +++L +T++++ + W E+ R L E Q +I D G + Q + + +L ++ H+PERL II AP +FVW IVS + E+T+ K+ I+ +
Sbjct: 10 HLSRADLL-RWLRARKLHVGKSSDFLQADLAWRRKHRIEERSGEDADAVLGCEVAKLKAFLPHENPPCL-----DRRGRPVIIKHFGHVYFSRLLNSTNITLDQLCDYNWWVNEQYTRRLNE----VGAEQWLIICDAKGFSPTQMDRVALKVLKSMANIDADHYPERLGGFVIINAPASLAFVWK-IVSAWLDEKTKAKVQIISA 204
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|551660359|ref|XP_005832947.1| (hypothetical protein GUITHDRAFT_108004 [Guillardia theta CCMP2712] >gi|428177086|gb|EKX45967.1| hypothetical protein GUITHDRAFT_108004 [Guillardia theta CCMP2712]) HSP 1 Score: 74.3294 bits (181), Expect = 6.756e-12 Identity = 59/207 (28.50%), Postives = 97/207 (46.86%), Query Frame = 0
Query: 37 ESRCSLFWRFLVANDGHVIRAKNQLARDVAWRD-----EIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLT-HLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHS 237
ES +L RFL A G V A L D WR+ +R K + +M I + P CLG + + P++YR++T ++N + LAE G +VE+ + ++ W E+ ++ + Q I+D+ + + +L +I+ F++ +K H PERL II AP F VW V + + T+ K+ I S
Sbjct: 66 ESMEALLQRFLKARSGDVNLAFKFLKEDCEWREANQILSLRTKSMDDMLVAGRNPILKETIVSMIPQGCLGRD---KQGRPILYRKVTGNMNVQKLAELGYSVEEFLIYQAWMLERTVAMMNDK------GQWISIMDLGELNLTKMMGNL-NIVKAFTALAKNHFPERLAHNIIINAPTVFGIVWRA-VQVWLDKETQKKVSIFSS 261
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|676393519|ref|XP_009040037.1| (hypothetical protein AURANDRAFT_66459 [Aureococcus anophagefferens] >gi|323449504|gb|EGB05392.1| hypothetical protein AURANDRAFT_66459 [Aureococcus anophagefferens]) HSP 1 Score: 73.9442 bits (180), Expect = 2.191e-11 Identity = 52/191 (27.23%), Postives = 89/191 (46.60%), Query Frame = 0
Query: 45 RFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVY-RRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMI 234
+F+V G V A + A WR E + + A I+ RHYP G E ++Y R+ H++ L GVT++ +++H + +E +L P+ P V++D+ G+ +QC + ++ +K H+PER ++ I AP+ FS VW +VS ++ T+ KI I
Sbjct: 813 KFIVGTGGDVREASRRWAETSRWRRERDVDAVMGEAHPKFAAIK-----RHYPHYWCGRGRRGE----LIYVERVGHVDAAGLKRDGVTIDHLVRHYILLHEFTWSVLAPAPDG-PTSYQCVVLDVDGVQLSQCRGIRFDYVRRCAAIAKEHYPERCSRMVIANAPQWFSVVWK-MVSPLVDPNTKKKIRI 992
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|470289052|ref|XP_004342753.1| (SEC14-like protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 73.9442 bits (180), Expect = 2.391e-11 Identity = 62/216 (28.70%), Postives = 99/216 (45.83%), Query Frame = 0
Query: 41 SLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHY-PCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPE--SFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPS 253
S+ RFL A + V +A L R + WR + + M ++ V +R Y PC G+ ++ PV R+ L+ K + K V+ E +IK ++ E +L E E P I+D G+ + +SI+ ++PE + +L +I AP F W +IV + ERTRNKI+IL G+ +LE+ + PS
Sbjct: 246 SVLLRFLRAREFSVEKAHEMLTRSLYWRQAVGADHILEMYKQPDV-------LRDYLPC---GWHHFDKDGRPVFVFRVGQLDVKGVM-KSVSEEDLIKQLIFINETGMKLASEATERTGRPIHDFTCIVDFEGLGLKHLWRPGVSIIQKIIQQDTANYPETMARLVVIRAPTLFPVAW-SIVRNVFDERTRNKIVIL----GDNFLEQLADILPS 445
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|765557877|gb|KJE98137.1| (SEC14-like protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 73.9442 bits (180), Expect = 2.412e-11 Identity = 62/216 (28.70%), Postives = 99/216 (45.83%), Query Frame = 0
Query: 41 SLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHY-PCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPE--SFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPS 253
S+ RFL A + V +A L R + WR + + M ++ V +R Y PC G+ ++ PV R+ L+ K + K V+ E +IK ++ E +L E E P I+D G+ + +SI+ ++PE + +L +I AP F W +IV + ERTRNKI+IL G+ +LE+ + PS
Sbjct: 261 SVLLRFLRAREFSVEKAHEMLTRSLYWRQAVGADHILEMYKQPDV-------LRDYLPC---GWHHFDKDGRPVFVFRVGQLDVKGVM-KSVSEEDLIKQLIFINETGMKLASEATERTGRPIHDFTCIVDFEGLGLKHLWRPGVSIIQKIIQQDTANYPETMARLVVIRAPTLFPVAW-SIVRNVFDERTRNKIVIL----GDNFLEQLADILPS 460
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|765557878|gb|KJE98138.1| (SEC14-like protein, variant [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 73.559 bits (179), Expect = 2.830e-11 Identity = 62/216 (28.70%), Postives = 99/216 (45.83%), Query Frame = 0
Query: 41 SLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHY-PCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPE--SFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPS 253
S+ RFL A + V +A L R + WR + + M ++ V +R Y PC G+ ++ PV R+ L+ K + K V+ E +IK ++ E +L E E P I+D G+ + +SI+ ++PE + +L +I AP F W +IV + ERTRNKI+IL G+ +LE+ + PS
Sbjct: 145 SVLLRFLRAREFSVEKAHEMLTRSLYWRQAVGADHILEMYKQPDV-------LRDYLPC---GWHHFDKDGRPVFVFRVGQLDVKGVM-KSVSEEDLIKQLIFINETGMKLASEATERTGRPIHDFTCIVDFEGLGLKHLWRPGVSIIQKIIQQDTANYPETMARLVVIRAPTLFPVAW-SIVRNVFDERTRNKIVIL----GDNFLEQLADILPS 344
BLAST of EWM29173.1 vs. NCBI_GenBank
Match: gi|325190291|emb|CCA24767.1| (SEC14 cytosolic factor putative [Albugo laibachii Nc14]) HSP 1 Score: 67.781 bits (164), Expect = 2.356e-9 Identity = 49/191 (25.65%), Postives = 94/191 (49.21%), Query Frame = 0
Query: 45 RFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMIL 235
RF+ A G+ R K + + ++WR E D+ + R+ E+ + YP F S+ +PV Y + ++ VL + G+++E +I H ++ E L+ + E + ++D+SG+ + +++ + S+F+ H+PER ++II P F+ +W IV +I TR K+ +L
Sbjct: 456 RFIAAEKGNEERGKERYLQTLSWRKE---NDVDQILRRPHRNFEN--IKKCYPQY---FHGRSKAGNPVYYEKPGKIDLLVLKQLGLSIEDLIYHYMYITE----FLWTYIEPDDAARSITVLDVSGIGMSSLGGEVLDFIKRASTFTAAHYPERSAHIFIINIPGWFNMIWR-IVKPLIDPVTREKVHML 633 The following BLAST results are available for this feature:
BLAST of EWM29173.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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