EWM29166.1, cds1464 (CDS) Nannochloropsis gaditana

Overview
NameEWM29166.1
Unique Namecds1464
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:709548..709890 +
Alignment locationCM002457.1:710099..710325 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29166.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100007g115.6493.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:709548..709890 +
CM002457.1supercontigCM002457.1:710099..710325 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom
Homology
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BLAST of EWM29166.1 vs. NCBI_GenBank
Match: gi|585111686|gb|EWM29166.1| (hypothetical protein Naga_100007g115 [Nannochloropsis gaditana])

HSP 1 Score: 397.512 bits (1020), Expect = 2.358e-140
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 
Query:    1 MCYRFDFMSISHLHTLSFPPHHFALDSQRMPLHSVYIVNAEFIVLYGKVFPSQAMGHNSGRLQWERALYRRTGQNWQVASLPQFFRDGEVTVVYLRFHDVVMIVAGTDECNETILTGLIETISDLFSFACWGKKKKKATRGSAEMDFVHKEGGAYVRFSIYLDQLISHGIVATMNVDVIDRLAKGRSIL 189
            MCYRFDFMSISHLHTLSFPPHHFALDSQRMPLHSVYIVNAEFIVLYGKVFPSQAMGHNSGRLQWERALYRRTGQNWQVASLPQFFRDGEVTVVYLRFHDVVMIVAGTDECNETILTGLIETISDLFSFACWGKKKKKATRGSAEMDFVHKEGGAYVRFSIYLDQLISHGIVATMNVDVIDRLAKGRSIL
Sbjct:    1 MCYRFDFMSISHLHTLSFPPHHFALDSQRMPLHSVYIVNAEFIVLYGKVFPSQAMGHNSGRLQWERALYRRTGQNWQVASLPQFFRDGEVTVVYLRFHDVVMIVAGTDECNETILTGLIETISDLFSFACWGKKKKKATRGSAEMDFVHKEGGAYVRFSIYLDQLISHGIVATMNVDVIDRLAKGRSIL 189
The following BLAST results are available for this feature:
BLAST of EWM29166.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111686|gb|EWM29166.1|2.358e-140100.00hypothetical protein Naga_100007g115 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1467rna1467Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications