EWM29211.1, cds1460 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29211.1 vs. NCBI_GenBank
Match: gi|585111731|gb|EWM29211.1| (hypothetical protein Naga_100007g118 [Nannochloropsis gaditana]) HSP 1 Score: 818.535 bits (2113), Expect = 0.000e+0 Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0
Query: 1 MKGLAASSSLVAAVFMISKVVQAFIPRLDFPQTSVLITGTTSTRTKESGGRDAVAHSPSDVVSSSSSIPLCAEVVLRRSFPNVEVAPGFLSAIRPNSKSTDTGRALIRAKAFANMAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGHDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVEEGSDEDEELVAAEALSGLLKRLESHKQKLEMTPTGKSAREKIQQDIDNTQAKIEAFEKDSETVKVAHEAGLGGLLGALGVCVPEAGDLSSALAGQGLDELFVMDDLDLMSVPTECETLLEDKGPMTNAVCREKASRAHVHVVMSTAKQELHTPKMIHYLTLLICGVTNLF 401
MKGLAASSSLVAAVFMISKVVQAFIPRLDFPQTSVLITGTTSTRTKESGGRDAVAHSPSDVVSSSSSIPLCAEVVLRRSFPNVEVAPGFLSAIRPNSKSTDTGRALIRAKAFANMAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGHDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVEEGSDEDEELVAAEALSGLLKRLESHKQKLEMTPTGKSAREKIQQDIDNTQAKIEAFEKDSETVKVAHEAGLGGLLGALGVCVPEAGDLSSALAGQGLDELFVMDDLDLMSVPTECETLLEDKGPMTNAVCREKASRAHVHVVMSTAKQELHTPKMIHYLTLLICGVTNLF
Sbjct: 1 MKGLAASSSLVAAVFMISKVVQAFIPRLDFPQTSVLITGTTSTRTKESGGRDAVAHSPSDVVSSSSSIPLCAEVVLRRSFPNVEVAPGFLSAIRPNSKSTDTGRALIRAKAFANMAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGHDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVEEGSDEDEELVAAEALSGLLKRLESHKQKLEMTPTGKSAREKIQQDIDNTQAKIEAFEKDSETVKVAHEAGLGGLLGALGVCVPEAGDLSSALAGQGLDELFVMDDLDLMSVPTECETLLEDKGPMTNAVCREKASRAHVHVVMSTAKQELHTPKMIHYLTLLICGVTNLF 401
BLAST of EWM29211.1 vs. NCBI_GenBank
Match: gi|299115546|emb|CBN75750.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 91.2781 bits (225), Expect = 5.184e-17 Identity = 75/237 (31.65%), Postives = 113/237 (47.68%), Query Frame = 0
Query: 87 PGFLSAIRPNSKSTDTGRALIR----AKAFANMAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGHDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVE-EGSDEDEELVAAEALSGLLKRLESHKQKLEMTPTGKS--AREKIQQDIDNTQAKIEA-FEKDSETVKVAHEAGLGGLLGALGVCVPE 315
P FL I T T L A F ++A +++SRG NVL+EDF YYS TG LDR +L L ++ A R + F V DGTV Y + G L +G + S K ++C V+F++ G + S + GL+VE + ED + VA + + KR+ + + K++ +S A K + DID + +EA E+ + G+ GL A+G PE
Sbjct: 37 PRFLDEIGHGETRTFTEEQLRNRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRESFLRLTKTLDVAFSTFRVTPTDFVVYKDGTVTYRRKFKAVHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDMGVVLSYAYGLMVEVVYAIEDPDAVA--EIEEIKKRVVNQQAKMKSLEGQESSIAYSKCKSDIDVMKLDMEALLERVNSAPNTEGLGGIPGLFAAVGAKFPE 271 The following BLAST results are available for this feature:
BLAST of EWM29211.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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