EWM30540.1, cds146 (CDS) Nannochloropsis gaditana

Overview
NameEWM30540.1
Unique Namecds146
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:378111..378145 +
Alignment locationCM002455.1:378761..379622 +
Alignment locationCM002455.1:379765..379863 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30540.1
Productt-snare family protein
Orig transcript idgnl|cribi|Naga_100013g77.9828.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:378111..378145 +
CM002455.1supercontigCM002455.1:378761..379622 +
CM002455.1supercontigCM002455.1:379765..379863 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0000003reproduction
GO:0006810transport
GO:0030154cell differentiation
GO:0016043cellular component organization
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010989t-SNARE
IPR006012Syntaxin/epimorphin_CS
IPR000727T_SNARE_dom
IPR006011Syntaxin_N
Homology
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|585113204|gb|EWM30540.1| (t-snare family protein [Nannochloropsis gaditana])

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
Query:    1 MNGFRFPNATKRMNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVLVLFVFKKQIGL 331
            MNGFRFPNATKRMNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVLVLFVFKKQIGL
Sbjct:    1 MNGFRFPNATKRMNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVLVLFVFKKQIGL 331          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|669157180|ref|XP_008614152.1| (hypothetical protein SDRG_09963 [Saprolegnia diclina VS20] >gi|530733969|gb|EQC32211.1| hypothetical protein SDRG_09963 [Saprolegnia diclina VS20])

HSP 1 Score: 286.574 bits (732), Expect = 1.551e-92
Identity = 156/314 (49.68%), Postives = 205/314 (65.29%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVLVLFVFK 326
            MNDRLAEL  K     S  V ID++             +++ T  ++P++M  FF DVE  + D++ I  A  R+  ++ +A LAT    E  +SQEL  VI  +N  AA AK ML  +K E+ + ++D     S++RIRDN++ TLTRKF+D MK+YQ AQ K+KA +K+KV+RQVQIVKPDAS +EI+ V +S   G  +   AIL+G+ ESI+ VY N  DKYQDVL LE S+AELHQMFLD ALLVEQQGEMLDQIE+QVK A+NY+E G  +V  AI   K  RK QCC+LV  +VL+ I V+    FK
Sbjct:    1 MNDRLAELTGK-----SSDVTIDVSE------------ASSTTEITRPKFMEKFFVDVEDMQADLSKIGLATDRIGELNHQALLATAAGEEQTISQELCLVIDNSNKIAAHAKGMLELIKKESVEKKKDKTVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRSADPG-AIYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKAASNYIEAGNKEVSKAIQTQKSMRKKQCCLLVFGLVLILIAVVAAGGFK 296          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|813150455|ref|XP_012200874.1| (hypothetical protein SPRG_06672 [Saprolegnia parasitica CBS 223.65] >gi|641534487|gb|KDO28434.1| hypothetical protein SPRG_06672 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 286.574 bits (732), Expect = 1.711e-92
Identity = 154/308 (50.00%), Postives = 203/308 (65.91%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVL 320
            MNDRLAEL  K     S  V ID++             +++ T  ++P++M  FF DVE  + D++ I  A  R+  ++ +A LAT    E  +SQEL  VI  TN  AA AK ML  +K E+ + ++D     S++RIRDN++ TLTRKF+D MK+YQ AQ K+KA +K+KV+RQVQIVKPDAS +EI+ V +S   G  +   AIL+G+ ESI+ VY N  DKYQDVL LE S+AELHQMFLD ALLVEQQGEMLDQIE+QVK A+NY++ G  +V  AI   K  RK QCC+LV  +VL+ I V+
Sbjct:    1 MNDRLAELTGK-----SSDVMIDISE------------ASSTTEITRPKFMEKFFLDVEDMQADLSKIGHATDRIGELNHQALLATAAGEEQTISQELCLVIDSTNKIAAHAKGMLELIKKESAEKKKDKTVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRSADPG-AIYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKAASNYIDAGNKEVTKAIQTQKSMRKKQCCLLVFGLVLILIAVI 290          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|1173940100|gb|OQR89631.1| (syntaxin [Thraustotheca clavata])

HSP 1 Score: 283.878 bits (725), Expect = 1.575e-91
Identity = 155/314 (49.36%), Postives = 205/314 (65.29%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVLVLFVFK 326
            M+DRLAEL     G  SD V IDM              S   +  ++P++M  FF DVE  + D+N I  A  R+  ++ +A +AT    E  +SQEL  VI  TN  AA  K +L  +K E+ + ++D     S++RIRDN++ TLTRKF+D MK+YQ AQ K+KA +K+KV+RQVQIVKPDAS +EI+ V +S   G  +   AIL+G+ ESI+ VY N  DKYQDVL LE S+AELHQMFLD ALLVEQQGEMLDQIE+QVK A+NY+E G  +V  AI + K  RK QCC+L+  +V++ ++VL   VFK
Sbjct:    1 MHDRLAEL----TGRSSD-VTIDM--------------SETSSEIARPKFMEKFFVDVEDMQADLNKIVLATDRICELNHQALIATAAGEEQTISQELCLVIDGTNKIAAHGKGLLELIKKESAEKKKDKNVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRSADPG-AIYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKAASNYIESGNKEVTKAIQSQKSLRKKQCCLLMFGLVIILVIVLAAGVFK 294          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|698796846|ref|XP_009831452.1| (hypothetical protein H257_07577 [Aphanomyces astaci] >gi|574113243|gb|ETV78733.1| hypothetical protein H257_07577 [Aphanomyces astaci])

HSP 1 Score: 281.182 bits (718), Expect = 2.100e-90
Identity = 152/314 (48.41%), Postives = 203/314 (64.65%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVLVLFVFK 326
            M+DRL+EL  K     +  V ID+              +A  TN ++P++M  FF DVE  + D+  I  A  R++ ++ +A LAT    E  +SQEL  VI  TN  AARAK +L  +K ET   ++D     S++RIRDN++ TLTRKF+D MKDYQ AQ ++KA +K+KV+RQVQIVKPDAS  EI+ V +S   G  +   AIL+G+N+SI+ VY N  DKYQDVL LE S+AELHQMFLD ALLVEQQGEMLDQIE+QVK A+NY++ G  +V  A+ + K  RK  CC+L   ++++ I VL    FK
Sbjct:    1 MHDRLSELTGKAA---AGDVAIDV--------------AAENTNVARPKFMEKFFVDVEEMQADLGKITVATDRIAELNHQALLATATGEEQIISQELCLVIDTTNKIAARAKGLLELIKKETADKKKDKNAPASEMRIRDNMSTTLTRKFMDTMKDYQKAQQRFKADMKNKVKRQVQIVKPDASEHEIDMVMRSADPG-AIYRSAILQGSNDSIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKTASNYIDAGNKEVTKALKSQKSMRKKMCCLLFFGLIVILIAVLASGAFK 296          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|568021658|gb|ETL95743.1| (hypothetical protein L917_06499 [Phytophthora parasitica])

HSP 1 Score: 278.1 bits (710), Expect = 6.295e-89
Identity = 155/317 (48.90%), Postives = 215/317 (67.82%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKG-ANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCML-VCIMVLVGILVLVLFVFKK 327
            M DRLAE+  KG   PSD V ID   ++ R     ++   +     +P++M  FF DVE  + D+ +I  A ++++ ++ +A LAT+   E  +S EL  VI+ TN  AA AK +L ++K E+ + ++D     S++RIRDN+  TLT+KF+D MK+YQ AQ KYK+ +K+KV+RQVQIVKPDAS  EI+AV +SG  G  +   AIL+G A ESI +V+ +  DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LDQI+YQV+ AANYVE+G  +VQ AI + K  RK  CC+L + + +LV I+V+ + V KK
Sbjct:    1 MLDRLAEI--KGKAPPSDQVAID---VEVRVPCCYSSSLMSRRGVVRPKFMEVFFKDVEEMQMDLASISLASQQITELNSKAILATSNTEEQAISTELGFVIETTNKLAAHAKGLLERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGS-IYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLLGIGVSILVAIVVIAM-VLKK 310          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|673048533|ref|XP_008878227.1| (hypothetical protein H310_12804 [Aphanomyces invadans] >gi|574466173|gb|ETV93205.1| hypothetical protein H310_12804 [Aphanomyces invadans])

HSP 1 Score: 277.33 bits (708), Expect = 8.118e-89
Identity = 153/314 (48.73%), Postives = 202/314 (64.33%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVLVLFVFK 326
            M+DRLAEL  K  G     V ID+         A   P     N ++P++M  FF DVE  + D+  I  A  R+  ++ +A LAT    E  +SQEL  VI  TN  AARAK +L  +K ET + ++D     S++RIRDN++ TLTRKF+D MK+YQ AQ ++K+ +K+KV+RQVQIVKPDAS +EI+ V +S   G  +   AIL+G+N+SI+ VY    DKYQDVL LE S+AELHQMFLD ALLVEQQGEMLDQIE+QVK A+NY++ G  +V  A+ + K  RK  CC+L   +V+V I VL    FK
Sbjct:    1 MHDRLAELTGKAPG----EVAIDV---------AAENP-----NVARPKFMEKFFLDVEDMQADLGKITVATDRIGELNHQALLATATGEEQIISQELCLVIDSTNKVAARAKALLELIKKETAEKKKDKVVPASEMRIRDNMSTTLTRKFMDTMKEYQKAQQRFKSDMKNKVKRQVQIVKPDASEQEIDMVMRSADPG-AIYRSAILQGSNDSIKEVYMTCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKTASNYIDAGNKEVTKALKSQKSMRKKMCCLLFFGLVVVLIAVLASGAFK 295          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|566026361|gb|ETI49272.1| (hypothetical protein F443_06819 [Phytophthora parasitica P1569] >gi|568052043|gb|ETM48929.1| hypothetical protein L914_06603 [Phytophthora parasitica])

HSP 1 Score: 276.944 bits (707), Expect = 1.887e-88
Identity = 155/317 (48.90%), Postives = 214/317 (67.51%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKG-ANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCML-VCIMVLVGILVLVLFVFKK 327
            M DRLAE+  KG   PSD V ID   ++ R     ++   +     +P++M  FF DVE  + D+  I  A ++++ ++ +A LAT+   E  +S EL  VI+ TN  AA AK +L ++K E+ + ++D     S++RIRDN+  TLT+KF+D MK+YQ AQ KYK+ +K+KV+RQVQIVKPDAS  EI+AV +SG  G  +   AIL+G A ESI +V+ +  DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LDQI+YQV+ AANYVE+G  +VQ AI + K  RK  CC+L + + +LV I+V+ + V KK
Sbjct:    1 MLDRLAEI--KGKAPPSDQVAID---VEVRVPCCYSSSLMSRRGVVRPKFMEVFFKDVEEMQMDLANISLASQQITELNSKAILATSNTEEQAISTELGFVIETTNKLAAHAKGLLERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGS-IYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLLGIGVSILVAIVVIAM-VLKK 310          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|1173946310|gb|OQR94857.1| (syntaxin [Achlya hypogyna])

HSP 1 Score: 275.404 bits (703), Expect = 3.129e-88
Identity = 153/307 (49.84%), Postives = 194/307 (63.19%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILV 319
            MNDRLAEL  K     S  V ID++                       ++M  FF DVE  + D+  I  A  R+S ++ +A LAT    E  +SQEL  VI  TN  AA AK ML  +K E+ + ++D     S++RIRDN++ TLTRKF+D MK+YQ AQ K+KA +K+KV+RQVQIVKPDAS +EI+ V +S   G  +   AIL+G+ ESI+ VY N  DKYQDVL LE S+AELHQMFLD ALLVEQQGEMLD IE+QVK A+NY+E G  +V  AI   K  RK QCC+LV  +V+V I V
Sbjct:    1 MNDRLAELTGK-----SSEVTIDIS-----------------------EFMEKFFVDVEDMQADLGKIVLATDRISELNHQALLATAAGEEQTISQELCLVIDATNKIAAHAKGMLELIKKESAEKKKDKTVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRSADPG-AIYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDHIEFQVKAASNYIEAGNKEVTKAIKTQKSMRKKQCCLLVFGLVIVLIAV 278          
BLAST of EWM30540.1 vs. NCBI_GenBank
Match: gi|675167197|ref|XP_008892483.1| (hypothetical protein PPTG_02905 [Phytophthora parasitica INRA-310] >gi|567963670|gb|ETK89163.1| hypothetical protein L915_06689 [Phytophthora parasitica] >gi|567992381|gb|ETL42573.1| hypothetical protein L916_06628 [Phytophthora parasitica] >gi|568108671|gb|ETN23295.1| hypothetical protein PPTG_02905 [Phytophthora parasitica INRA-310])

HSP 1 Score: 276.174 bits (705), Expect = 3.987e-88
Identity = 156/318 (49.06%), Postives = 214/318 (67.30%), Query Frame = 0
Query:   13 MNDRLAELRAKGGGTPSDSVGIDM-TRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKG-ANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCML-VCIMVLVGILVLVLFVFKK 327
            M DRLAE+  KG   PSD V ID+  R+      +  +  A      +P++M  FF DVE  + D+  I  A ++++ ++ +A LAT+   E  +S EL  VI+ TN  AA AK +L ++K E+ + ++D     S++RIRDN+  TLT+KF+D MK+YQ AQ KYK+ +K+KV+RQVQIVKPDAS  EI+AV +SG  G  +   AIL+G A ESI +V+ +  DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LDQI+YQV+ AANYVE+G  +VQ AI + K  RK  CC+L + + +LV I+V+ + V KK
Sbjct:    1 MLDRLAEI--KGKAPPSDQVAIDVEVRVPCCYSSSLMSRWANGRGVVRPKFMEVFFKDVEEMQMDLANISLASQQITELNSKAILATSNTEEQAISTELGFVIETTNKLAAHAKGLLERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGS-IYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLLGIGVSILVAIVVIAM-VLKK 314          
The following BLAST results are available for this feature:
BLAST of EWM30540.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113204|gb|EWM30540.1|0.000e+0100.00t-snare family protein [Nannochloropsis gaditana][more]
gi|669157180|ref|XP_008614152.1|1.551e-9249.68hypothetical protein SDRG_09963 [Saprolegnia dicli... [more]
gi|813150455|ref|XP_012200874.1|1.711e-9250.00hypothetical protein SPRG_06672 [Saprolegnia paras... [more]
gi|1173940100|gb|OQR89631.1|1.575e-9149.36syntaxin [Thraustotheca clavata][more]
gi|698796846|ref|XP_009831452.1|2.100e-9048.41hypothetical protein H257_07577 [Aphanomyces astac... [more]
gi|568021658|gb|ETL95743.1|6.295e-8948.90hypothetical protein L917_06499 [Phytophthora para... [more]
gi|673048533|ref|XP_008878227.1|8.118e-8948.73hypothetical protein H310_12804 [Aphanomyces invad... [more]
gi|566026361|gb|ETI49272.1|1.887e-8848.90hypothetical protein F443_06819 [Phytophthora para... [more]
gi|1173946310|gb|OQR94857.1|3.129e-8849.84syntaxin [Achlya hypogyna][more]
gi|675167197|ref|XP_008892483.1|3.987e-8849.06hypothetical protein PPTG_02905 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna146rna146Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications