EWM29229.1, cds1445 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|585111750|gb|EWM29229.1| (methyltransferase family protein [Nannochloropsis gaditana]) HSP 1 Score: 594.349 bits (1531), Expect = 0.000e+0 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
Query: 1 MSGNKCAVAGAYHDHDFDFDAYRRSTEPTLATVSCLPREDIFRAESPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQRGDG 285
MSGNKCAVAGAYHDHDFDFDAYRRSTEPTLATVSCLPREDIFRAESPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQRGDG
Sbjct: 1 MSGNKCAVAGAYHDHDFDFDAYRRSTEPTLATVSCLPREDIFRAESPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQRGDG 285
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|553193666|ref|XP_005855813.1| (methyltransferase family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293246|gb|EKU20546.1| methyltransferase family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0 Identity = 281/286 (98.25%), Postives = 283/286 (98.95%), Query Frame = 0
Query: 1 MSGNKCAVAGAYHDHDFDFDAYRRSTEPTLATVSCLPREDIFRAESPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNF-KCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQRGDG 285
MSG+KCAVAGAYHDHDFDFDAYRRSTEPTLATVSCLPREDI RAESPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNF KCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIG+KEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIGQQLYKRADGTLAYFFTAEDINQLA TAGFHVQECKYATVLSKNRATREELKRVFVHAKLQRGDG
Sbjct: 3 MSGDKCAVAGAYHDHDFDFDAYRRSTEPTLATVSCLPREDIVRAESPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFVKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGRKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIGQQLYKRADGTLAYFFTAEDINQLAITAGFHVQECKYATVLSKNRATREELKRVFVHAKLQRGDG 288
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|545368597|ref|XP_005649079.1| (S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa subellipsoidea C-169] >gi|384251057|gb|EIE24535.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 184.496 bits (467), Expect = 2.412e-53 Identity = 115/289 (39.79%), Postives = 156/289 (53.98%), Query Frame = 0
Query: 3 GNKCAVAGAYHDHDFDFDAYRRSTEPTLATVSCLPREDIF--RAESPPVQ---AWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALG--DIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVR--SRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQR 282
G + A A YH +DFD++ R E A L D A P Q +WE+F R + A F+K+RRYL+LEFP L D A + EIGCG GSSL +++ANP A D+S TA+ L A I +R TAF CD D + D VL+ F L+A+ +E+H + A+ AL+PGGLLL RD+G D +R + ++G++LY+R DGTL YFF+ ED++ A AGF ECKYA NR TR E++RVFVH ++
Sbjct: 10 GERTAPASEYHSNDFDWEDLRAEVEALAANKQQLTGGDTCDGPAAEPWAQDPRSWENFHARDNATARFYKERRYLLLEFPALADAARPQ--------HVAEIGCGCGSSLLPVLKANPAARVTATDISPTAVRLFTDAAARAGIAPERYTAFPCDAADPDAGPRQLSGLDADCVLLIFTLAALAPEEQH-IMLSNAFKALKPGGLLLIRDHGVYDITHLRMTADRQVGEKLYRRGDGTLCYFFSVEDLSSKAEAAGFEAVECKYACTRLLNRKTRFEMRRVFVHGVFRK 289
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|1173926357|gb|OQR80621.1| (methyltransferase domain-containing protein [Thraustotheca clavata]) HSP 1 Score: 161.77 bits (408), Expect = 6.753e-45 Identity = 104/281 (37.01%), Postives = 150/281 (53.38%), Query Frame = 0
Query: 11 AYHDHDFDFDAYRRSTEPTLATVSCLPREDIFRAE--SPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIG------QQLYKRADGTLAYFFTAEDINQLASTAG-FHVQECKYATVLSKNRATREELKRVFVHAKLQR 282
++H HDFD++ + E LAT P E++ + + W+ F +++ K +K R YL EFPELL LLEIGCGYGS++ ++ +P + CD S A+ +L + +R AF+CDVV +I V S+D VLM F+LSAI E V + Y AL+PGG++ FRDYG D M+RS RI LY R+DGTLAYFF+ ++ ++ + F V E +Y TV +NR T+ + RV+VH K Q+
Sbjct: 3 SFHCHDFDWNELAAACEGQLAT----PVENVDTSNLCTLAQDNWDVFHAKNNGKV--YKPRNYLYKEFPELLKD----------NLTLLEIGCGYGSAIFPLLAQSPSMFAHVCDFSQHAITILQEN-SEYDGKRCHAFVCDVVSQEID---VPDASIDIVLMIFVLSAI-PPHEFDNVMAKIYKALKPGGIVCFRDYGLYDLAMLRSSKRIESTSHGFNSLYYRSDGTLAYFFSKGELERIFTANNRFQVVENEYNTVRLRNRKTQTNMDRVWVHGKFQK 262
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|168049491|ref|XP_001777196.1| (predicted protein [Physcomitrella patens] >gi|162671424|gb|EDQ57976.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 162.925 bits (411), Expect = 8.898e-45 Identity = 110/301 (36.54%), Postives = 146/301 (48.50%), Query Frame = 0
Query: 9 AGAYHDHDFDFDAYRRSTEPTLATVSCLP--REDIFRAESPPVQ-AWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRAL---GDIYKQRLTAFICDVVKNDIPCHLVLPG-------------------SMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVR--SRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQR 282
AGAY+ DF+++A R + L D+ ESP +WE+F RHS + FFK+RRYL EFP+L +LE+GCG GSS+ I+ AN FACD S AL + G+ F+CD+ + +P L +D V M F LSAI E+ V + L+PGGLLLFRDYG D M+R R I LY+R DGTL+YFF+ E + L + AGF QE +Y VL NR + +KRV+VHAK +
Sbjct: 11 AGAYYSQDFEWEALRDEIKRMLEASDQHDHLNVDLREEESPSTSTSWETFHSRHS-RNLFFKERRYLTKEFPDLCQPGKSLL--------VLEVGCGTGSSVIPIIRANKQATVFACDCSPAALRKAAEVVTGAGESSASSFYPFLCDISTSKLPDFLRCSACRQKYHHLHSHPSVDCCIEGLDIVTMIFTLSAI-PVEKMAHVLSECFEVLKPGGLLLFRDYGLYDMTMLRFAPRQHISSCLYQREDGTLSYFFSLEVVRSLFTQAGFVEQELEYCCVLLTNRRKQVPMKRVWVHAKFHK 301
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|302813916|ref|XP_002988643.1| (hypothetical protein SELMODRAFT_235583 [Selaginella moellendorffii] >gi|300143750|gb|EFJ10439.1| hypothetical protein SELMODRAFT_235583 [Selaginella moellendorffii]) HSP 1 Score: 161.77 bits (408), Expect = 1.988e-44 Identity = 104/307 (33.88%), Postives = 147/307 (47.88%), Query Frame = 0
Query: 11 AYHDHDFDFDAYRRSTEPTLATVSCLPREDIFRAESPPVQ---------AWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLL----DRALGDIYKQRLTAFICDVVKNDIPCHLVL------------------PGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVR--SRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQRGD 284
AY+ DFD++ R E +D+ R E + AWE F RHS + FFK+RRYL+ EFPEL +N +LE+GCG GSS I+ A +ACDLS A+ L ++AL + K RL F+CD +P L G DF+ + F LSA+ ++ + + LRPGG+LLFRDYG D M+R + ++ Y+R DGTL+YFF+ E + L + AG E +Y + N T+ +KRV+VHAK + D
Sbjct: 6 AYYSKDFDWNDLREEVESA---------QDLARVEEKMISSEHACTAALAWEKFHSRHS-QGIFFKERRYLLKEFPEL--------GRSNQDFTVLEVGCGAGSSAIPILRATTTARVYACDLSEAAVSLTNKMGEKALNEQAKSRLRTFVCDPSCEALPAWLACDACRASDFGIKSSLVSCCEGGADFITLIFALSALADLDQMSNLLKECCSVLRPGGMLLFRDYGLYDMTMLRFPADQKVAANCYRRLDGTLSYFFSCEAVRDLFTGAGLLEIELEYCCIKLVNHKTKVPMKRVWVHAKFMKPD 294
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|1173936451|gb|OQR87393.1| (methyltransferase domain-containing protein [Achlya hypogyna]) HSP 1 Score: 157.918 bits (398), Expect = 2.245e-43 Identity = 105/278 (37.77%), Postives = 155/278 (55.76%), Query Frame = 0
Query: 9 AGAYHDHDFDFDAYRRSTEPTLATVSCLPREDIFRAESPPVQA--WESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIGQQ--LYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQR 282
A +H HDF++ + + LA P E + A+ + W+ F +++ K +K R YL EFPELL +AT+ +LE+GCGYGS++ ++ P + CD S A+ +L R +R AF+CD+V ++I V S+D VLM F+LSAI +V + + AL+PGGL+ FRDYG D M+RS R+ LY R+DGTLAYFF+ +DI +A+ F V E +Y TV +NR T+ + RV+VHAKL++
Sbjct: 4 ATTFHSHDFEWADLAATCQEALAK-EAKPVESVDAAQLSALAQTHWDVFHAKNNGKV--YKPRNYLSKEFPELL------SATS-----VLEVGCGYGSAIFPLLAQCPTMRAHVCDFSRHAIDIL-RGNQAYETERCHAFVCDIVADEID---VPDASIDVVLMVFVLSAI-PPSAFASVLAKVHRALKPGGLVCFRDYGRYDLAMMRSSKRLSDSDALYYRSDGTLAYFFSTDDITAMAAH-RFEVVENEYNTVRLRNRKTQASMDRVWVHAKLRK 261
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|1063689735|ref|NP_001319228.1| (Methyltransferase family protein [Arabidopsis thaliana] >gi|28393263|gb|AAO42060.1| unknown protein [Arabidopsis thaliana] >gi|56550685|gb|AAV97796.1| At1g54650 [Arabidopsis thaliana] >gi|332195009|gb|AEE33130.1| Methyltransferase family protein [Arabidopsis thaliana]) HSP 1 Score: 158.688 bits (400), Expect = 2.568e-43 Identity = 105/302 (34.77%), Postives = 159/302 (52.65%), Query Frame = 0
Query: 9 AGAYHDHDFDFDAYRRSTE--PTLATVSCLPREDIFRAESPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTAL----HLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLP--------------------GSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVR--SRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQR 282
AG YH DF+++ + E P+L+ +++ + P Q W+ F RHS FFK+RRYL+ EFPEL+ GE + +LLEIGCG GS++ I+ + ++ +ACD S+ AL +DRA+ + +F CD ++ P + G +DFV + F LSA+ K+ +A+ +A L+PGGLLLFRDYG D M+R R+G + Y R+DGTL+YFF + +L + AGF E +Y V + NR +++ RV+VH K Q+
Sbjct: 7 AGEYHSKDFEWEFLKNIVENDPSLSHHLHHHHQNLSKY-LPDSQPWQDFHSRHS-SGKFFKERRYLLKEFPELV-SCGENS-------KLLEIGCGNGSTVLPILRGSKNITVYACDCSSDALVRTKENIDRAISSV--DNFHSFCCDFSTSEFPDWVACDRCRDKFMLNHSGGSESKHCIGGVDFVTLIFTLSAVPKERMPRAI-KECFAVLKPGGLLLFRDYGLYDMTMLRFEPEKRVGFREYVRSDGTLSYFFCLDTARKLFTDAGFIEVELEYCCVKAVNRRKGKDMYRVWVHGKFQK 295
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|1063694696|ref|NP_175866.3| (Methyltransferase family protein [Arabidopsis thaliana] >gi|1039010433|gb|ANM60389.1| Methyltransferase family protein [Arabidopsis thaliana]) HSP 1 Score: 159.073 bits (401), Expect = 4.165e-43 Identity = 105/302 (34.77%), Postives = 159/302 (52.65%), Query Frame = 0
Query: 9 AGAYHDHDFDFDAYRRSTE--PTLATVSCLPREDIFRAESPPVQAWESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTAL----HLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLP--------------------GSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVR--SRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQR 282
AG YH DF+++ + E P+L+ +++ + P Q W+ F RHS FFK+RRYL+ EFPEL+ GE + +LLEIGCG GS++ I+ + ++ +ACD S+ AL +DRA+ + +F CD ++ P + G +DFV + F LSA+ K+ +A+ +A L+PGGLLLFRDYG D M+R R+G + Y R+DGTL+YFF + +L + AGF E +Y V + NR +++ RV+VH K Q+
Sbjct: 27 AGEYHSKDFEWEFLKNIVENDPSLSHHLHHHHQNLSKY-LPDSQPWQDFHSRHSS-GKFFKERRYLLKEFPELVS-CGENS-------KLLEIGCGNGSTVLPILRGSKNITVYACDCSSDALVRTKENIDRAISSV--DNFHSFCCDFSTSEFPDWVACDRCRDKFMLNHSGGSESKHCIGGVDFVTLIFTLSAVPKERMPRAI-KECFAVLKPGGLLLFRDYGLYDMTMLRFEPEKRVGFREYVRSDGTLSYFFCLDTARKLFTDAGFIEVELEYCCVKAVNRRKGKDMYRVWVHGKFQK 315
BLAST of EWM29229.1 vs. NCBI_GenBank
Match: gi|953491909|emb|CEG45486.1| (methyltransferase-like protein 6 [Plasmopara halstedii]) HSP 1 Score: 157.147 bits (396), Expect = 7.267e-43 Identity = 92/231 (39.83%), Postives = 131/231 (56.71%), Query Frame = 0
Query: 52 WESFFHRHSDKATFFKKRRYLVLEFPELLDKAGEYAATNNFKCRLLEIGCGYGSSLAAIMEANPDLICFACDLSTTALHLLDRALGDIYKQRLTAFICDVVKNDIPCHLVLPGSMDFVLMTFMLSAIGKKEEHQAVFHRAYAALRPGGLLLFRDYGWCDAKMVRSRNRIGQQLYKRADGTLAYFFTAEDINQLASTAGFHVQECKYATVLSKNRATREELKRVFVHAKLQR 282
W+ F R+ KA +K R YL+ EFPEL E +LE+GCGYGS++ I+ P++ CD S A+ +L + D +R AF+CD+ ++ V P S+D VLM F+LSA+ E + YAAL+P G++ FRDYG D M R+ ++G LY R DGTLAYFF+ E +++L S AGF V E Y TV +NR + RV++HAK ++
Sbjct: 57 WDDFHQRNKGKA--YKPRNYLIKEFPELDSPDREV-------IEVLELGCGYGSTIFPILAKCPNVHAQVCDFSANAIDIL-QLNADYDSKRCRAFVCDIALEEL--KDVAPESIDIVLMIFVLSAL-PPESFARTLKKIYAALQPEGVVCFRDYGLYDLAMRRNAKKLGPSLYYRNDGTLAYFFSREKLSELFSQAGFIVLENDYCTVRLRNRKNGVTMDRVWLHAKFRK 274 The following BLAST results are available for this feature:
BLAST of EWM29229.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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