EWM29243.1, cds1434 (CDS) Nannochloropsis gaditana

Overview
NameEWM29243.1
Unique Namecds1434
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:626004..626427 +
Alignment locationCM002457.1:626627..627147 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29243.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100119g12.8001.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:626004..626427 +
CM002457.1supercontigCM002457.1:626627..627147 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|585111765|gb|EWM29243.1| (hypothetical protein Naga_100119g12 [Nannochloropsis gaditana])

HSP 1 Score: 643.654 bits (1659), Expect = 0.000e+0
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
Query:    1 MTTVRSAKKAQDTVLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHEASAATAVVWHLEVPHVLTESPVVT 314
            MTTVRSAKKAQDTVLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHEASAATAVVWHLEVPHVLTESPVVT
Sbjct:    1 MTTVRSAKKAQDTVLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHEASAATAVVWHLEVPHVLTESPVVT 314          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|1149591309|gb|OON00995.1| (hypothetical protein BSLG_08261 [Batrachochytrium salamandrivorans])

HSP 1 Score: 149.443 bits (376), Expect = 2.112e-39
Identity = 94/284 (33.10%), Postives = 138/284 (48.59%), Query Frame = 0
Query:   13 TVLIATRIH-GRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKG---------------------CRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQ--GQISWKVDWSDPARQEWHRKKMESKL 272
            ++L+A RIH   ++   L  D + L+  +     Y+D +A+A   +D      L +A   +    G                      ++ ++PV+ WG+F+PALNA L +A+Q  F++ILY S E++       A++ +FD  + LVVG A  GH F  G + L G T PWNT A+WSV KL  TGFL V+EG  S    GGVEEV+VI + Q+   P                             +A L+ LQ  G  SW   W+D  R+EWH KK+ S++
Sbjct:   24 SILVAVRIHRNNQSDKTLPIDLSSLQRLVVQAATYSDQIAIAYPQSDRLLADALASAFACITANAGSNESSMPLDKKVDFGVDHAPVAKVALVPVSTWGNFIPALNALLLYAIQGQFTHILYQSAEVNTCASEISAMMSSFDK-DTLVVGKAFPGHAFEEGMRRLDGVTVPWNTLAIWSVPKLQRTGFLMVAEG--SQDMEGGVEEVSVIAVLQRLFSPSQE--------------------------KAVLMSLQSDGHSSWNTIWADNGRREWHDKKVSSRI 278          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|575474640|ref|XP_006676614.1| (hypothetical protein BATDEDRAFT_22755 [Batrachochytrium dendrobatidis JAM81] >gi|328772642|gb|EGF82680.1| hypothetical protein BATDEDRAFT_22755 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 147.902 bits (372), Expect = 2.641e-39
Identity = 93/258 (36.05%), Postives = 131/258 (50.78%), Query Frame = 0
Query:   13 TVLIATRIH-GRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPF-HPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKM 268
            ++L+A RIH   + T + S D  KL   +  +  YA  +A+A   +D   H  L+        E    R+ ++PV  WG F+PALNA L  A+   F YILY S+E  ++      ++  FD  + LVVG AL GH F  G+Q L G T PWNT ALW+VSKL   GFL V+EG  S+   GGVEEV+ I + Q+ + P  + ++  + R +  PS+                       W   W+D  RQ WH KK+
Sbjct:    9 SILVAVRIHRNNQHTQSDSIDLVKLCKLVTQSKPYATQIAIAYPQSDTLLHDALVGTFHPTAVEPDDKRVVLVPVVKWGRFIPALNALLLEAVNGGFKYILYQSVEAVVSANEIHTMISWFD-QDTLVVGKALSGHAFTVGKQRLNGVTTPWNTLALWAVSKLKCLGFLMVAEG--SEDVQGGVEEVSAIAVFQKLVSPNHAKAI--LLRMSEDPSQ----------------------DWDTQWTDQGRQAWHDKKL 239          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|298707560|emb|CBJ30144.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 145.976 bits (367), Expect = 1.093e-37
Identity = 109/319 (34.17%), Postives = 141/319 (44.20%), Query Frame = 0
Query:   16 IATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAV-------------------------EVADPFHPRLLVAAQDVVKEFKGCR------------------INVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQ-PLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHE 290
            + TR+H  +  A    D  K+R+FL+  + YAD++A+AV                           + P    + +AA++  +E    R                  +NV  VTPWG F PALNA L FA ++    +++ SLE  +   A   +     PA DLVVGAAL GH FR G    LTG T PWNT ALW V+KL+  GFL V+EGL       GVEEV  I   Q  L                           A   RAKL+ L  Q+ W   W D  R+ WH  KM SK  RA  Q+ ALG+   T E
Sbjct:   43 VCTRVH--QNNADRPVDLVKVREFLNTALLYADSIAIAVGPPPPPPPPSTDQHGTTTTSTAAAAGSSPPLLQSITLAAREAEREAPPDRAVESVGEGGGGEGRAAGVVNVFEVTPWGKFTPALNALLGFASRDGAELVMFQSLETTVGKDAVSGMEAYMGPA-DLVVGAALTGHAFRGGETVELTGVTTPWNTLALWDVAKLAKLGFLGVAEGLLPGV-PAGVEEVTAIAALQVLL--------------------------GAEHARAKLVRLP-QVRWHTAWEDEGRRRWHESKMSSKRERADKQMSALGIKKGTVE 330          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|635368888|emb|CCI42922.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 132.494 bits (332), Expect = 7.320e-33
Identity = 99/299 (33.11%), Postives = 136/299 (45.48%), Query Frame = 0
Query:   18 TRIHGRETTAALSFD----SAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKE-FKG-------------------CRINVLPVTPWGHFVPALNAALS--FAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQ----PLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHL-QGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGL 284
            TR+H +  +     D    S  ++ F H+   Y+  + + ++V     P LL   QD V E F+                      I ++ +T WG FVPALNAAL+   A   D   IL+ SLE+     A   L D+F+  EDLV+G  L GH +         PL G T+PWNT A+W++  LS  GF  + EG+ +D    GVEEVA I L Q                  L P +S          +AKLL L +    W  + W+D  RQ+WH +KM  K+ RA  QL   GL
Sbjct:   16 TRLHWKNHSKYQEIDAEEISGSVQLFCHSAAKYSSGIILVIQV-----PLLLFTKQDGVHEPFENTVRSVLEKIQKVIADLATVITIKLIQLTYWGEFVPALNAALTATCASFPDSKVILFQSLEVRCDSRAVACLFDHFELEEDLVIGCVLPGHKYTKLDVGVFVPLDGCTSPWNTFAMWNLRLLSKIGFPLICEGIGTDTSTAGVEEVATITLFQ-----------------TLFPLQS----------KAKLLELPEAAFKWNTEQWADEKRQKWHDEKMRRKIWRAERQLERFGL 282          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|635368889|emb|CCI42923.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 132.109 bits (331), Expect = 8.466e-33
Identity = 99/299 (33.11%), Postives = 136/299 (45.48%), Query Frame = 0
Query:   18 TRIHGRETTAALSFD----SAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKE-FKG-------------------CRINVLPVTPWGHFVPALNAALS--FAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQ----PLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHL-QGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGL 284
            TR+H +  +     D    S  ++ F H+   Y+  + + ++V     P LL   QD V E F+                      I ++ +T WG FVPALNAAL+   A   D   IL+ SLE+     A   L D+F+  EDLV+G  L GH +         PL G T+PWNT A+W++  LS  GF  + EG+ +D    GVEEVA I L Q                  L P +S          +AKLL L +    W  + W+D  RQ+WH +KM  K+ RA  QL   GL
Sbjct:   15 TRLHWKNHSKYQEIDAEEISGSVQLFCHSAAKYSSGIILVIQV-----PLLLFTKQDGVHEPFENTVRSVLEKIQKVIADLATVITIKLIQLTYWGEFVPALNAALTATCASFPDSKVILFQSLEVRCDSRAVACLFDHFELEEDLVIGCVLPGHKYTKLDVGVFVPLDGCTSPWNTFAMWNLRLLSKIGFPLICEGIGTDTSTAGVEEVATITLFQ-----------------TLFPLQS----------KAKLLELPEAAFKWNTEQWADEKRQKWHDEKMRRKIWRAERQLERFGL 281          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|676377851|ref|XP_009032204.1| (hypothetical protein AURANDRAFT_70491 [Aureococcus anophagefferens] >gi|323456665|gb|EGB12531.1| hypothetical protein AURANDRAFT_70491 [Aureococcus anophagefferens])

HSP 1 Score: 137.887 bits (346), Expect = 1.404e-32
Identity = 97/266 (36.47%), Postives = 132/266 (49.62%), Query Frame = 0
Query:   15 LIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKGCR------INVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTR 274
            + ATR+H  +  A+   D +K+R F+       D VA+AV V      R L A  ++    +         ++V+PV PWG+F+PALNA  + A +  + +IL+ S+E    P   R L    D A+ LV GAAL GH F PG +PLTG T PWNT ALW V  L+L GF  V EGL +    GGVEEV+ I                              +K + A  RA L+ + G ++W  D+ D  R  WH KKM SK +R
Sbjct:   13 IAATRLHVGD--ASRPPDLSKVRAFVDRVAPAVDRVAIAVGVPG-VEERTLEALGELAAGVRAACAGAAAPVDVVPVEPWGNFLPALNALTAHAARRGYGFILFASVEAAADPATARRLRAELDGADALVAGAALPGHDFSPGERPLTGVTTPWNTLALWRVPSLALLGFPLVGEGLHA-GAAGGVEEVSAI---------------------------HALAKVHPAKARALLVAVPG-VAWATDFDDEKRAAWHAKKMASKESR 246          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|1210520814|dbj|GAX20377.1| (hypothetical protein FisN_9Hh090 [Fistulifera solaris])

HSP 1 Score: 130.954 bits (328), Expect = 2.132e-32
Identity = 107/286 (37.41%), Postives = 146/286 (51.05%), Query Frame = 0
Query:   14 VLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADP--FHPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFA---MQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFR-PGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMG---GVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTH 289
            +++ATR+H      A +  + K+  F HN    + AV +    A P   +  L+ A   +  E    RI+VLPVTPWG FV ALNA + +A   +Q D   IL+LS E  +     + LL +  P + LVVGA L GH  R      L+G T+PWNT A+W + KLSLTGF  VS+GL +D       GVEEV  I L Q+ L                          NA   +AKL+ L+  + W+VD + DP R++W  +KM+SK  RA  QL  +GLA   H
Sbjct:   32 IVVATRLHLGNALTAPTDLATKIAAF-HNICQTSCAVGIIAVDATPKIANYNLVDAVSQMCAEVDE-RIHVLPVTPWGEFVSALNALVIYARKRLQAD--RILFLSAETVVDRDGIQELLAHLTP-DTLVVGARLPGHVVRGECVTLLSGTTSPWNTLAVWDLHKLSLTGFQLVSDGLLTDDKEEPSFGVEEVVAIALLQKLL-----------------------GTENA---KAKLVTLK-HVDWQVDSFDDPERRKWQEEKMKSKEIRAQRQLDLIGLAGKVH 285          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|1210514040|dbj|GAX26822.1| (hypothetical protein FisN_9Lh090 [Fistulifera solaris])

HSP 1 Score: 129.413 bits (324), Expect = 9.525e-32
Identity = 106/288 (36.81%), Postives = 144/288 (50.00%), Query Frame = 0
Query:   14 VLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPF----HPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFA---MQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFR-PGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMG---GVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTH 289
            V++ATR+H      A +  + K+  F HN    +   AV +   D      +  L+ A   +  E    RI+VLPVTPWG FV ALNA + +A   +Q D   IL+LS E        + LL +  P + LVVG  L GH  R      L+G T+PWNT A+W++ KLSLTGF  VS+GL +D       GVEEV  I L Q+ L                          NA   +AKL+ L+  + W+VD ++DP R++W  +KM+SK  RA  QL   GLA   H
Sbjct:   33 VVVATRLHLGNALTAPTDLATKITSF-HNICQTSCQGAVGIIAVDATPKIANYNLVDAVSQICAEVDE-RIHVLPVTPWGEFVSALNALVIYARKRLQAD--RILFLSAETVADHNDIQELLSHLTP-DTLVVGGRLPGHAVRGECVTLLSGTTSPWNTLAVWNLHKLSLTGFQLVSDGLLTDDKEEPSFGVEEVVAIALLQKLL-----------------------GTENA---KAKLVSLK-HVDWQVDSFNDPERRKWQEEKMKSKEIRAQRQLDLTGLAGEVH 288          
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|301122223|ref|XP_002908838.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262099600|gb|EEY57652.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 126.716 bits (317), Expect = 1.162e-30
Identity = 103/323 (31.89%), Postives = 151/323 (46.75%), Query Frame = 0
Query:   15 LIATRIH--GRETTAALSFDSA--KLRDFLHNTVAYADA---VAVA-----VEVADPFHPRLLVAAQDVVKEFK------------GCRINVLPVTPWGHFVPALNAALSFAMQE--DFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFR--PGRQP--LTGATAPWNTCALWSVSKLSLTGFLAVSEGLASD-KGMG---GVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHEASAATAVVWHLE 302
            ++ TR+H      +  ++ D    ++R F    V Y+D    +AV      +  A P       A  D V+EF               ++ ++P+  WG FVPALNA +  A         ++  SLE+D+   +  +L  +FD  +DLVVGA L GH FR  P  QP  L+G T+PWNT ALW++ +L+  GF  + + L  +  G+G   G+EEVA I + QQ      S + + + R    PS                      I+W+V+   DP R EWH+KKMESK  RA +QL         H    A+  V+HLE
Sbjct:    6 VVGTRLHWHSHSQSDRINVDKVLDQVRAFCTRAVTYSDGGILIAVGLPEAGIITAAPGEAPSSSAFIDSVREFMSKLNSEVAAGTLAGKVEIIPMLHWGKFVPALNALIGTAADHFPAADTLILQSLEIDVDATSVASLRSHFDVTQDLVVGAVLPGHDFRPDPSSQPVELSGLTSPWNTLALWNLEQLTKVGFALMGDALRLEADGIGSAAGIEEVATIAMYQQLYASGSSPTTAKLVR---VPS----------------------IAWQVNGLQDPKRLEWHKKKMESKQQRAAAQL--------AHFGGVASGCVYHLE 295          
The following BLAST results are available for this feature:
BLAST of EWM29243.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111765|gb|EWM29243.1|0.000e+0100.00hypothetical protein Naga_100119g12 [Nannochlorops... [more]
gi|1149591309|gb|OON00995.1|2.112e-3933.10hypothetical protein BSLG_08261 [Batrachochytrium ... [more]
gi|575474640|ref|XP_006676614.1|2.641e-3936.05hypothetical protein BATDEDRAFT_22755 [Batrachochy... [more]
gi|298707560|emb|CBJ30144.1|1.093e-3734.17conserved unknown protein [Ectocarpus siliculosus][more]
gi|635368888|emb|CCI42922.1|7.320e-3333.11unnamed protein product [Albugo candida][more]
gi|635368889|emb|CCI42923.1|8.466e-3333.11unnamed protein product [Albugo candida][more]
gi|676377851|ref|XP_009032204.1|1.404e-3236.47hypothetical protein AURANDRAFT_70491 [Aureococcus... [more]
gi|1210520814|dbj|GAX20377.1|2.132e-3237.41hypothetical protein FisN_9Hh090 [Fistulifera sola... [more]
gi|1210514040|dbj|GAX26822.1|9.525e-3236.81hypothetical protein FisN_9Lh090 [Fistulifera sola... [more]
gi|301122223|ref|XP_002908838.1|1.162e-3031.89conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1436rna1436Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications