EWM29243.1, cds1434 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|585111765|gb|EWM29243.1| (hypothetical protein Naga_100119g12 [Nannochloropsis gaditana]) HSP 1 Score: 643.654 bits (1659), Expect = 0.000e+0 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
Query: 1 MTTVRSAKKAQDTVLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHEASAATAVVWHLEVPHVLTESPVVT 314
MTTVRSAKKAQDTVLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHEASAATAVVWHLEVPHVLTESPVVT
Sbjct: 1 MTTVRSAKKAQDTVLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHEASAATAVVWHLEVPHVLTESPVVT 314
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|1149591309|gb|OON00995.1| (hypothetical protein BSLG_08261 [Batrachochytrium salamandrivorans]) HSP 1 Score: 149.443 bits (376), Expect = 2.112e-39 Identity = 94/284 (33.10%), Postives = 138/284 (48.59%), Query Frame = 0
Query: 13 TVLIATRIH-GRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKG---------------------CRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQ--GQISWKVDWSDPARQEWHRKKMESKL 272
++L+A RIH ++ L D + L+ + Y+D +A+A +D L +A + G ++ ++PV+ WG+F+PALNA L +A+Q F++ILY S E++ A++ +FD + LVVG A GH F G + L G T PWNT A+WSV KL TGFL V+EG S GGVEEV+VI + Q+ P +A L+ LQ G SW W+D R+EWH KK+ S++
Sbjct: 24 SILVAVRIHRNNQSDKTLPIDLSSLQRLVVQAATYSDQIAIAYPQSDRLLADALASAFACITANAGSNESSMPLDKKVDFGVDHAPVAKVALVPVSTWGNFIPALNALLLYAIQGQFTHILYQSAEVNTCASEISAMMSSFDK-DTLVVGKAFPGHAFEEGMRRLDGVTVPWNTLAIWSVPKLQRTGFLMVAEG--SQDMEGGVEEVSVIAVLQRLFSPSQE--------------------------KAVLMSLQSDGHSSWNTIWADNGRREWHDKKVSSRI 278
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|575474640|ref|XP_006676614.1| (hypothetical protein BATDEDRAFT_22755 [Batrachochytrium dendrobatidis JAM81] >gi|328772642|gb|EGF82680.1| hypothetical protein BATDEDRAFT_22755 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 147.902 bits (372), Expect = 2.641e-39 Identity = 93/258 (36.05%), Postives = 131/258 (50.78%), Query Frame = 0
Query: 13 TVLIATRIH-GRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPF-HPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKM 268
++L+A RIH + T + S D KL + + YA +A+A +D H L+ E R+ ++PV WG F+PALNA L A+ F YILY S+E ++ ++ FD + LVVG AL GH F G+Q L G T PWNT ALW+VSKL GFL V+EG S+ GGVEEV+ I + Q+ + P + ++ + R + PS+ W W+D RQ WH KK+
Sbjct: 9 SILVAVRIHRNNQHTQSDSIDLVKLCKLVTQSKPYATQIAIAYPQSDTLLHDALVGTFHPTAVEPDDKRVVLVPVVKWGRFIPALNALLLEAVNGGFKYILYQSVEAVVSANEIHTMISWFD-QDTLVVGKALSGHAFTVGKQRLNGVTTPWNTLALWAVSKLKCLGFLMVAEG--SEDVQGGVEEVSAIAVFQKLVSPNHAKAI--LLRMSEDPSQ----------------------DWDTQWTDQGRQAWHDKKL 239
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|298707560|emb|CBJ30144.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 145.976 bits (367), Expect = 1.093e-37 Identity = 109/319 (34.17%), Postives = 141/319 (44.20%), Query Frame = 0
Query: 16 IATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAV-------------------------EVADPFHPRLLVAAQDVVKEFKGCR------------------INVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQ-PLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHE 290
+ TR+H + A D K+R+FL+ + YAD++A+AV + P + +AA++ +E R +NV VTPWG F PALNA L FA ++ +++ SLE + A + PA DLVVGAAL GH FR G LTG T PWNT ALW V+KL+ GFL V+EGL GVEEV I Q L A RAKL+ L Q+ W W D R+ WH KM SK RA Q+ ALG+ T E
Sbjct: 43 VCTRVH--QNNADRPVDLVKVREFLNTALLYADSIAIAVGPPPPPPPPSTDQHGTTTTSTAAAAGSSPPLLQSITLAAREAEREAPPDRAVESVGEGGGGEGRAAGVVNVFEVTPWGKFTPALNALLGFASRDGAELVMFQSLETTVGKDAVSGMEAYMGPA-DLVVGAALTGHAFRGGETVELTGVTTPWNTLALWDVAKLAKLGFLGVAEGLLPGV-PAGVEEVTAIAALQVLL--------------------------GAEHARAKLVRLP-QVRWHTAWEDEGRRRWHESKMSSKRERADKQMSALGIKKGTVE 330
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|635368888|emb|CCI42922.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 132.494 bits (332), Expect = 7.320e-33 Identity = 99/299 (33.11%), Postives = 136/299 (45.48%), Query Frame = 0
Query: 18 TRIHGRETTAALSFD----SAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKE-FKG-------------------CRINVLPVTPWGHFVPALNAALS--FAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQ----PLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHL-QGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGL 284
TR+H + + D S ++ F H+ Y+ + + ++V P LL QD V E F+ I ++ +T WG FVPALNAAL+ A D IL+ SLE+ A L D+F+ EDLV+G L GH + PL G T+PWNT A+W++ LS GF + EG+ +D GVEEVA I L Q L P +S +AKLL L + W + W+D RQ+WH +KM K+ RA QL GL
Sbjct: 16 TRLHWKNHSKYQEIDAEEISGSVQLFCHSAAKYSSGIILVIQV-----PLLLFTKQDGVHEPFENTVRSVLEKIQKVIADLATVITIKLIQLTYWGEFVPALNAALTATCASFPDSKVILFQSLEVRCDSRAVACLFDHFELEEDLVIGCVLPGHKYTKLDVGVFVPLDGCTSPWNTFAMWNLRLLSKIGFPLICEGIGTDTSTAGVEEVATITLFQ-----------------TLFPLQS----------KAKLLELPEAAFKWNTEQWADEKRQKWHDEKMRRKIWRAERQLERFGL 282
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|635368889|emb|CCI42923.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 132.109 bits (331), Expect = 8.466e-33 Identity = 99/299 (33.11%), Postives = 136/299 (45.48%), Query Frame = 0
Query: 18 TRIHGRETTAALSFD----SAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKE-FKG-------------------CRINVLPVTPWGHFVPALNAALS--FAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQ----PLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHL-QGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGL 284
TR+H + + D S ++ F H+ Y+ + + ++V P LL QD V E F+ I ++ +T WG FVPALNAAL+ A D IL+ SLE+ A L D+F+ EDLV+G L GH + PL G T+PWNT A+W++ LS GF + EG+ +D GVEEVA I L Q L P +S +AKLL L + W + W+D RQ+WH +KM K+ RA QL GL
Sbjct: 15 TRLHWKNHSKYQEIDAEEISGSVQLFCHSAAKYSSGIILVIQV-----PLLLFTKQDGVHEPFENTVRSVLEKIQKVIADLATVITIKLIQLTYWGEFVPALNAALTATCASFPDSKVILFQSLEVRCDSRAVACLFDHFELEEDLVIGCVLPGHKYTKLDVGVFVPLDGCTSPWNTFAMWNLRLLSKIGFPLICEGIGTDTSTAGVEEVATITLFQ-----------------TLFPLQS----------KAKLLELPEAAFKWNTEQWADEKRQKWHDEKMRRKIWRAERQLERFGL 281
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|676377851|ref|XP_009032204.1| (hypothetical protein AURANDRAFT_70491 [Aureococcus anophagefferens] >gi|323456665|gb|EGB12531.1| hypothetical protein AURANDRAFT_70491 [Aureococcus anophagefferens]) HSP 1 Score: 137.887 bits (346), Expect = 1.404e-32 Identity = 97/266 (36.47%), Postives = 132/266 (49.62%), Query Frame = 0
Query: 15 LIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPFHPRLLVAAQDVVKEFKGCR------INVLPVTPWGHFVPALNAALSFAMQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFRPGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMGGVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVDWSDPARQEWHRKKMESKLTR 274
+ ATR+H + A+ D +K+R F+ D VA+AV V R L A ++ + ++V+PV PWG+F+PALNA + A + + +IL+ S+E P R L D A+ LV GAAL GH F PG +PLTG T PWNT ALW V L+L GF V EGL + GGVEEV+ I +K + A RA L+ + G ++W D+ D R WH KKM SK +R
Sbjct: 13 IAATRLHVGD--ASRPPDLSKVRAFVDRVAPAVDRVAIAVGVPG-VEERTLEALGELAAGVRAACAGAAAPVDVVPVEPWGNFLPALNALTAHAARRGYGFILFASVEAAADPATARRLRAELDGADALVAGAALPGHDFSPGERPLTGVTTPWNTLALWRVPSLALLGFPLVGEGLHA-GAAGGVEEVSAI---------------------------HALAKVHPAKARALLVAVPG-VAWATDFDDEKRAAWHAKKMASKESR 246
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|1210520814|dbj|GAX20377.1| (hypothetical protein FisN_9Hh090 [Fistulifera solaris]) HSP 1 Score: 130.954 bits (328), Expect = 2.132e-32 Identity = 107/286 (37.41%), Postives = 146/286 (51.05%), Query Frame = 0
Query: 14 VLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADP--FHPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFA---MQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFR-PGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMG---GVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTH 289
+++ATR+H A + + K+ F HN + AV + A P + L+ A + E RI+VLPVTPWG FV ALNA + +A +Q D IL+LS E + + LL + P + LVVGA L GH R L+G T+PWNT A+W + KLSLTGF VS+GL +D GVEEV I L Q+ L NA +AKL+ L+ + W+VD + DP R++W +KM+SK RA QL +GLA H
Sbjct: 32 IVVATRLHLGNALTAPTDLATKIAAF-HNICQTSCAVGIIAVDATPKIANYNLVDAVSQMCAEVDE-RIHVLPVTPWGEFVSALNALVIYARKRLQAD--RILFLSAETVVDRDGIQELLAHLTP-DTLVVGARLPGHVVRGECVTLLSGTTSPWNTLAVWDLHKLSLTGFQLVSDGLLTDDKEEPSFGVEEVVAIALLQKLL-----------------------GTENA---KAKLVTLK-HVDWQVDSFDDPERRKWQEEKMKSKEIRAQRQLDLIGLAGKVH 285
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|1210514040|dbj|GAX26822.1| (hypothetical protein FisN_9Lh090 [Fistulifera solaris]) HSP 1 Score: 129.413 bits (324), Expect = 9.525e-32 Identity = 106/288 (36.81%), Postives = 144/288 (50.00%), Query Frame = 0
Query: 14 VLIATRIHGRETTAALSFDSAKLRDFLHNTVAYADAVAVAVEVADPF----HPRLLVAAQDVVKEFKGCRINVLPVTPWGHFVPALNAALSFA---MQEDFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFR-PGRQPLTGATAPWNTCALWSVSKLSLTGFLAVSEGLASDKGMG---GVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTH 289
V++ATR+H A + + K+ F HN + AV + D + L+ A + E RI+VLPVTPWG FV ALNA + +A +Q D IL+LS E + LL + P + LVVG L GH R L+G T+PWNT A+W++ KLSLTGF VS+GL +D GVEEV I L Q+ L NA +AKL+ L+ + W+VD ++DP R++W +KM+SK RA QL GLA H
Sbjct: 33 VVVATRLHLGNALTAPTDLATKITSF-HNICQTSCQGAVGIIAVDATPKIANYNLVDAVSQICAEVDE-RIHVLPVTPWGEFVSALNALVIYARKRLQAD--RILFLSAETVADHNDIQELLSHLTP-DTLVVGGRLPGHAVRGECVTLLSGTTSPWNTLAVWNLHKLSLTGFQLVSDGLLTDDKEEPSFGVEEVVAIALLQKLL-----------------------GTENA---KAKLVSLK-HVDWQVDSFNDPERRKWQEEKMKSKEIRAQRQLDLTGLAGEVH 288
BLAST of EWM29243.1 vs. NCBI_GenBank
Match: gi|301122223|ref|XP_002908838.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262099600|gb|EEY57652.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 126.716 bits (317), Expect = 1.162e-30 Identity = 103/323 (31.89%), Postives = 151/323 (46.75%), Query Frame = 0
Query: 15 LIATRIH--GRETTAALSFDSA--KLRDFLHNTVAYADA---VAVA-----VEVADPFHPRLLVAAQDVVKEFK------------GCRINVLPVTPWGHFVPALNAALSFAMQE--DFSYILYLSLEMDLTPMAFRALLDNFDPAEDLVVGAALEGHHFR--PGRQP--LTGATAPWNTCALWSVSKLSLTGFLAVSEGLASD-KGMG---GVEEVAVICLAQQCLQPRPSVSLSSIFRWNLKPSESVHSKRNAAGMRAKLLHLQGQISWKVD-WSDPARQEWHRKKMESKLTRAGSQLRALGLAHPTHEASAATAVVWHLE 302
++ TR+H + ++ D ++R F V Y+D +AV + A P A D V+EF ++ ++P+ WG FVPALNA + A ++ SLE+D+ + +L +FD +DLVVGA L GH FR P QP L+G T+PWNT ALW++ +L+ GF + + L + G+G G+EEVA I + QQ S + + + R PS I+W+V+ DP R EWH+KKMESK RA +QL H A+ V+HLE
Sbjct: 6 VVGTRLHWHSHSQSDRINVDKVLDQVRAFCTRAVTYSDGGILIAVGLPEAGIITAAPGEAPSSSAFIDSVREFMSKLNSEVAAGTLAGKVEIIPMLHWGKFVPALNALIGTAADHFPAADTLILQSLEIDVDATSVASLRSHFDVTQDLVVGAVLPGHDFRPDPSSQPVELSGLTSPWNTLALWNLEQLTKVGFALMGDALRLEADGIGSAAGIEEVATIAMYQQLYASGSSPTTAKLVR---VPS----------------------IAWQVNGLQDPKRLEWHKKKMESKQQRAAAQL--------AHFGGVASGCVYHLE 295 The following BLAST results are available for this feature:
BLAST of EWM29243.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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