EWM30465.1, cds140 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|585113129|gb|EWM30465.1| (hypothetical protein Naga_100013g83 [Nannochloropsis gaditana]) HSP 1 Score: 296.59 bits (758), Expect = 6.535e-102 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MVSTNYSSLNIASLLRIIAILLLVLHPNHAWFSISRLLSRTVKNAPGHLSVLGSGSSDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQKMYWCCGEEDENAPGCKYDRHRSYDDE 141
MVSTNYSSLNIASLLRIIAILLLVLHPNHAWFSISRLLSRTVKNAPGHLSVLGSGSSDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQKMYWCCGEEDENAPGCKYDRHRSYDDE
Sbjct: 1 MVSTNYSSLNIASLLRIIAILLLVLHPNHAWFSISRLLSRTVKNAPGHLSVLGSGSSDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQKMYWCCGEEDENAPGCKYDRHRSYDDE 141
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|950959094|ref|XP_014497380.1| (PREDICTED: uncharacterized protein LOC106758892 [Vigna radiata var. radiata]) HSP 1 Score: 81.6481 bits (200), Expect = 3.834e-17 Identity = 49/128 (38.28%), Postives = 64/128 (50.00%), Query Frame = 0
Query: 23 LVLHPNHAWFSISRLLSRTVKNAPGHLSVLGSGS----SDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDD 140
L+LH N F++ T + P + ++L S S ++Q +I CKNCKT +DPS NH ACR+H H+ G+TKRK + T YW CCG ED PGC H SYDD
Sbjct: 10 LLLHGNKTPFTLQ--FQCTTSSKPNNANILTYPSIRCCSSLNQKSSINLRTCKNCKTQFDPSLNHPLACRFHTAHFGGETKRKFESVYEGGTMNTPDSGKVLQYWHCCGSEDPFDPGCTSSPHASYDD 135
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|449445965|ref|XP_004140742.1| (PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus] >gi|778679751|ref|XP_011651192.1| PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus] >gi|700202296|gb|KGN57429.1| hypothetical protein Csa_3G185090 [Cucumis sativus]) HSP 1 Score: 80.1073 bits (196), Expect = 1.486e-16 Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = 0
Query: 29 HAWFSISR--LLSRTVK---NAPGHLSVLGSGSSDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDDE 141
H+ F + R L+RT K N+P L++ S +S+ +T C+NCK +DPS NH RACR+H H+ G+TKRK + S T YW CCG ED PGC H SYDD+
Sbjct: 18 HSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQ----LTLRTCRNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD 137
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|388513505|gb|AFK44814.1| (unknown [Lotus japonicus]) HSP 1 Score: 79.7221 bits (195), Expect = 1.865e-16 Identity = 50/127 (39.37%), Postives = 64/127 (50.39%), Query Frame = 0
Query: 24 VLHPNHAWFSISRLLSRTVKNAPGHLSVLGSGS----SDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDD 140
+LH N F++ RT + + S+L S S ++Q +I CKNCKT +DP+ NH RACR+H HY G+TKRK + T YW CCG ED PGC H SYDD
Sbjct: 10 LLHLNKIPFALQS--QRTPSSNTTYTSLLQFPSIRCCSTLNQKNSINLNTCKNCKTQFDPALNHPRACRFHTAHYGGETKRKFESVYEGGTMNTPDSGKVLQYWHCCGSEDPFDPGCTASPHSSYDD 134
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|586671398|ref|XP_006837184.1| (uncharacterized protein LOC18428080 isoform X1 [Amborella trichopoda] >gi|548839781|gb|ERN00038.1| hypothetical protein AMTR_s00105p00062390 [Amborella trichopoda]) HSP 1 Score: 79.7221 bits (195), Expect = 2.425e-16 Identity = 45/130 (34.62%), Postives = 62/130 (47.69%), Query Frame = 0
Query: 17 IIAILLLVLHPNHAWFSISRLLSRTVKNAPGHLSVLGSGSSDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDD 140
++++L +V W S S + V N L++ M C+ CK+ +DPSRNH RACR+H H+ G+TKRK + +T YW CCG ED PGC H+SYDD
Sbjct: 29 LLSVLPVVTSAERPWRSCSAVRCGEVNNGAVGLNL----------------MTCRQCKSQFDPSRNHSRACRFHTAHFGGETKRKFESVHKGGTMSTPDSGRVLQYWHCCGSEDPFDPGCTAAPHQSYDD 142
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|593331552|ref|XP_007139202.1| (hypothetical protein PHAVU_008G009900g [Phaseolus vulgaris] >gi|561012335|gb|ESW11196.1| hypothetical protein PHAVU_008G009900g [Phaseolus vulgaris]) HSP 1 Score: 78.9518 bits (193), Expect = 3.759e-16 Identity = 48/125 (38.40%), Postives = 65/125 (52.00%), Query Frame = 0
Query: 23 LVLHPNHAWFSI-SRLLSRTVKNAPGHLSVLGSGSSDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDD 140
L+LH N F++ S+ + + N + S+ S ++Q +I+ CKNCKT +DPS NH ACR+H H+ G+TKRK + T YW CCG ED PGC H SYDD
Sbjct: 9 LLLHGNKMPFTVQSQCIISSNPNIFTYPSI--RCCSSLNQKSSISHRTCKNCKTQFDPSLNHPLACRFHTAHFGGETKRKFESVYEGGTMNTPDSGKVFQYWHCCGSEDPFDPGCTSSPHTSYDD 131
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|566171413|ref|XP_006383359.1| (hypothetical protein POPTR_0005s14830g [Populus trichocarpa] >gi|550338968|gb|ERP61156.1| hypothetical protein POPTR_0005s14830g [Populus trichocarpa]) HSP 1 Score: 78.9518 bits (193), Expect = 3.883e-16 Identity = 41/88 (46.59%), Postives = 50/88 (56.82%), Query Frame = 0
Query: 59 IHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDD 140
I+Q+ T CKNCKT +DPS NH RACR+H H+ G+TKRK + + +T YW CCG ED PGC H SYDD
Sbjct: 44 INQNNNKTLRTCKNCKTQFDPSLNHPRACRFHTSHFGGETKRKFESVYTGGTMSTPDSGQVFQYWHCCGSEDPFDPGCTAAPHSSYDD 131
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|743821144|ref|XP_011021338.1| (PREDICTED: uncharacterized protein LOC105123443 [Populus euphratica]) HSP 1 Score: 78.5666 bits (192), Expect = 5.976e-16 Identity = 41/88 (46.59%), Postives = 49/88 (55.68%), Query Frame = 0
Query: 59 IHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDD 140
I+Q+ T CKNCKT +DPS NH RACR+H H+ G+TKRK + + T YW CCG ED PGC H SYDD
Sbjct: 44 INQNSNRTLRTCKNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVYTGGTMNTPDSGQVFQYWHCCGSEDPFDPGCTAAPHSSYDD 131
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|1098821294|ref|XP_018816863.1| (PREDICTED: uncharacterized protein LOC108988171 [Juglans regia] >gi|1098821296|ref|XP_018816864.1| PREDICTED: uncharacterized protein LOC108988171 [Juglans regia]) HSP 1 Score: 78.1814 bits (191), Expect = 9.301e-16 Identity = 52/139 (37.41%), Postives = 66/139 (47.48%), Query Frame = 0
Query: 12 ASLLRIIAILLLVLH--PNHAWFSISRLLSRTVKN--APGHLSVLGSGSSDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDD 140
A+L A LL H P A ++ S T K+ +P + + Q IT CKNCKT +DP+ NH RACR+H H+ G+TKRK + + T YW CCG ED PGC H SYDD
Sbjct: 3 AALSHSQARFLLFFHQNPPVAPQTLRLQTSETQKSTYSPPRFRAVRCSAKPNEQ---ITLRTCKNCKTQFDPALNHPRACRFHTAHFGGETKRKFESVYTGGTMDTPNSGKVVQYWHCCGSEDPFDPGCTASPHSSYDD 138
BLAST of EWM30465.1 vs. NCBI_GenBank
Match: gi|1044528787|ref|XP_017408960.1| (PREDICTED: uncharacterized protein LOC108321652 [Vigna angularis] >gi|920681766|gb|KOM28546.1| hypothetical protein LR48_Vigan549s010100 [Vigna angularis] >gi|965668417|dbj|BAT83024.1| hypothetical protein VIGAN_04011900 [Vigna angularis var. angularis]) HSP 1 Score: 77.0258 bits (188), Expect = 2.198e-15 Identity = 40/90 (44.44%), Postives = 48/90 (53.33%), Query Frame = 0
Query: 57 SDIHQSCTITEMLCKNCKTYYDPSRNHERACRYHPKHYSGDTKRKADWSASADRFATQK-----MYW-CCGEEDENAPGCKYDRHRSYDD 140
S ++Q +I CKNCKT +DPS NH ACR+H H+ G+TKRK + T YW CCG ED PGC H SYDD
Sbjct: 45 SSLNQKSSINLRTCKNCKTQFDPSLNHPLACRFHTAHFGGETKRKFESVYEGGTMNTPDSGKVLQYWHCCGSEDPFDPGCTSSPHASYDD 134 The following BLAST results are available for this feature:
BLAST of EWM30465.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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