EWM29288.1, cds1397 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|585111811|gb|EWM29288.1| (hypothetical protein Naga_100029g26 [Nannochloropsis gaditana]) HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
Query: 1 MIYVHHFNSTRDASFLSEFGPRSAIMSTMRLAFALGLLCVISTIANAFVIPAAKSSSLVNRQYHARYGQQRGVINLDKLAKTRALTVLRESQQGGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVENGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERPASAQASRPEGESAAPAEPASA 313
MIYVHHFNSTRDASFLSEFGPRSAIMSTMRLAFALGLLCVISTIANAFVIPAAKSSSLVNRQYHARYGQQRGVINLDKLAKTRALTVLRESQQGGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVENGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERPASAQASRPEGESAAPAEPASA
Sbjct: 1 MIYVHHFNSTRDASFLSEFGPRSAIMSTMRLAFALGLLCVISTIANAFVIPAAKSSSLVNRQYHARYGQQRGVINLDKLAKTRALTVLRESQQGGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVENGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERPASAQASRPEGESAAPAEPASA 313
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|585111812|gb|EWM29289.1| (hypothetical protein Naga_100029g26 [Nannochloropsis gaditana]) HSP 1 Score: 340.502 bits (872), Expect = 3.675e-115 Identity = 173/192 (90.10%), Postives = 177/192 (92.19%), Query Frame = 0
Query: 1 MIYVHHFNSTRDASFLSEFGPRSAIMSTMRLAFALGLLCVISTIANAFVIPAAKSSSLVNRQYHARYGQQRGVINLDKLAKTRALTVLRESQQGGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADR---LFEQKSTPTIQKI 189
MIYVHHFNSTRDASFLSEFGPRSAIMSTMRLAFALGLLCVISTIANAFVIPAAKSSSLVNRQYHARYGQQRGVINLDKLAKTRALTVLRESQQGGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVE D +QK++ K+
Sbjct: 1 MIYVHHFNSTRDASFLSEFGPRSAIMSTMRLAFALGLLCVISTIANAFVIPAAKSSSLVNRQYHARYGQQRGVINLDKLAKTRALTVLRESQQGGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVEVRLFCDHDLAWLKQKTSHVRAKV 192
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|219125791|ref|XP_002183156.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405431|gb|EEC45374.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 256.914 bits (655), Expect = 5.026e-81 Identity = 120/192 (62.50%), Postives = 154/192 (80.21%), Query Frame = 0
Query: 104 PFELRGFSLATVALGVGALITIGSLAEYLISSGSEGL--SGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQG-VENGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERP 292
PFE+RGFSL + +G G LIT S AEYL SG +GL SG+GFVYGIP+ L G +L+YA++NPVPV +TP A+R+F++K+T TI KIK+DVTRHRYGD+AHLDTTV+ LGLV+P K +PQLQ L Q V +GELAF+MV++S DTPY++W +P R+ +YE FFGPGV+A V K+DAE+RLV I+L TG RP
Sbjct: 84 PFEIRGFSLGNLVVGAGILITFASFAEYLSESGGDGLNVSGLGFVYGIPVFLAGAALKYAEINPVPVATTPAAERVFDRKATDTILKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLQELRQDEVNDGELAFTMVWQSVDTPYKMWADPRRVLKYEKFFGPGVYADVVKIDAEQRLVGIRLTTGTRP 275
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|1210524721|dbj|GAX16429.1| (hypothetical protein FisN_19Lh005 [Fistulifera solaris]) HSP 1 Score: 233.417 bits (594), Expect = 8.118e-73 Identity = 117/201 (58.21%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 104 PFELRGFSLATVALGVGALITIGSLAEYLISSGSEG-LSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGV-ENG-ELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERPASAQASRPE 301
PFE+RGFSL +G+G LITI S AEYL + EG +SG+GFVYGIPI L G +L+YA++ PVP + P+A+ LFE+K+T T++KIK+DVTRHRYGD+AHLDTTV+ LGLV+P K +PQL+ L + V ENG +LAF+MV++S DTPY++W + R+ +YETFFGPGV A V KVDAE+RLV I+L T PA + + P+
Sbjct: 28 PFEIRGFSLGNSVIGLGLLITIASFAEYL--AQDEGSMSGLGFVYGIPIFLAGSALKYAEIEPVPAFTQPKAEGLFEKKATETMRKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLRELREEVAENGVDLAFTMVWQSLDTPYKMWADERRVKKYETFFGPGVTAEVVKVDAEQRLVGIRLTTTTAPAPLKEAAPQ 226
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|298713742|emb|CBJ33716.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 235.343 bits (599), Expect = 1.203e-72 Identity = 142/288 (49.31%), Postives = 192/288 (66.67%), Query Frame = 0
Query: 23 SAIMSTMRLAFALGLLCVISTIANAFVIPAAKSSSLVNRQYHARYGQQRGVINLDKLAKTRALTVLRESQQGGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVE-NGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVT---GERPASAQASRPEGESAA 306
+A ++ + A A GL+ S +A V+ +A+S S +H G++R + L + + + GG N+ G + PFE+RGFSLA A G IT S EY + G+ GLSG+GFVYGIPI LIGL+L+YA+L P P+++TPEA+ LFE+K+T TI+ IK DVTRHRYGD+AHLDTTV+ LGLVMP ++PQLQY++Q +E NGEL F+MVF+S TP++ WVEPER+ +Y FFGPGV A V KVDA+ +LVAIKL T G +P + P E+ A
Sbjct: 19 TAFVAPVGQAAAGGLVASSSQQQHARVLVSARSQSSDTFHHHRAGGRRRQRLALQMQSDGPS-----QWAGGGINVSG-EAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVA 300
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|1210521445|dbj|GAX19435.1| (hypothetical protein FisN_19Hh005 [Fistulifera solaris]) HSP 1 Score: 231.876 bits (590), Expect = 2.434e-72 Identity = 115/201 (57.21%), Postives = 152/201 (75.62%), Query Frame = 0
Query: 104 PFELRGFSLATVALGVGALITIGSLAEYLISSGSEG-LSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVENG--ELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERPASAQASRPE 301
PFE+RGFSL +G+G LITI S AEYL + EG +SG+GFVYGIPI L G +L+YA++ PVP + P+A+ LFE+K+T T++KIK+DVTRHRYGD+AHLDTTV+ LGLV+P K +PQL+ L + V +LAF+MV++S DTPY++W + R+ +YETFFGPGV A V KVDAE+RLV I+L T PA + S P+
Sbjct: 28 PFEIRGFSLGNSVIGLGLLITIASFAEYL--AQDEGSMSGLGFVYGIPIFLAGSALKYAEIEPVPAFTQPKAEGLFEKKATETMRKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLRELREEVAENRVDLAFTMVWQSLDTPYKMWADERRVKKYETFFGPGVTAEVVKVDAEQRLVGIRLTTTTAPAPMKESAPQ 226
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|224000149|ref|XP_002289747.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974955|gb|EED93284.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 232.646 bits (592), Expect = 7.633e-72 Identity = 121/210 (57.62%), Postives = 154/210 (73.33%), Query Frame = 0
Query: 104 PFELRGFSLATVALGVGALITIGSLAEYLISSGSEGL--SGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGV-ENGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERPASAQ--ASRPEGESAAPA 308
PFE+RGFSL G +T+ S AEYL SSG +GL SG+GFVYGIPI L G +L+YA+++PVP S+ AD FE K+T I+KIK+DVTRHRYGD+AHLDTTV+ LGLV+P K +PQL L Q V + G+LAF+MV++S DTPY++W + +R RYETFFGPGV A V K+DAE+RLV I+L TG P S + AS+ E E+ A A
Sbjct: 76 PFEIRGFSLGNFITIAGIAVTVLSFAEYLSSSGGDGLNVSGLGFVYGIPITLAGAALKYAEIDPVPCISSSAADAAFESKATEIIKKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLMELRQDVTDGGDLAFTMVWQSLDTPYKMWADEKRRKRYETFFGPGVGAEVVKIDAEQRLVGIRLTTG-GPLSEEYLASKVEKEAVATA 284
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|1072234715|gb|OEU19444.1| (hypothetical protein FRACYDRAFT_162891, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 221.861 bits (564), Expect = 5.216e-69 Identity = 105/180 (58.33%), Postives = 138/180 (76.67%), Query Frame = 0
Query: 109 GFSLATVALGVGALITIGSLAEYLISSGSEGL--SGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVENGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKL 286
GFSL + + G +IT+ S AEYL S EGL SG+GFVYGIP+ L G +L+YA++NPVP+ + P +R++E K T TI KIK+DVTRHRYGD+AHLDTTV+ LGLV+P K++PQLQ L +GELAF+MV++S DTPY++W + R+ +YETFFGPGV A V K+DAE+RLV I+L
Sbjct: 1 GFSLGNLVILSGVVITVLSFAEYLSDSSGEGLNVSGLGFVYGIPVCLAGAALKYAEINPVPLITNPAGERVYEAKKTETIDKIKQDVTRHRYGDEAHLDTTVRKLGLVVPGKDYPQLQELRAEDADGELAFTMVWQSIDTPYKMWADERRVKKYETFFGPGVTAEVVKIDAEQRLVGIRL 180
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|873234166|emb|CEM02223.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 225.713 bits (574), Expect = 2.428e-68 Identity = 112/192 (58.33%), Postives = 144/192 (75.00%), Query Frame = 0
Query: 104 PFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLV-MPNKEFPQLQYLTQGVE-NGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERPA 293
P ++RGFSLA L G++IT+ S E+ G GL +GF+YG+PILLIG++LQYA+L P PV +T EADR+F+ K+T TI+KIK+DVTRHRYGDDAHLDTTV++LGL P KE PQLQY+ QGV +GEL F MV+KS+ TP+R+W + R+ +++ +FGPGVWA KVD RLV IKL TGER A
Sbjct: 17 PIQIRGFSLAKATLLAGSVITLASFWEFFGQKGGSGLGSLGFIYGVPILLIGVALQYAELEPCPVRTTSEADRMFDAKATETIKKIKEDVTRHRYGDDAHLDTTVESLGLWPNPEKEPPQLQYIQQGVSPDGELEFMMVWKSETTPFRMWCDVNRVLKFDRYFGPGVWAQTVKVDGPNRLVGIKLTTGERKA 208
BLAST of EWM29288.1 vs. NCBI_GenBank
Match: gi|551653686|ref|XP_005829620.1| (hypothetical protein GUITHDRAFT_111319 [Guillardia theta CCMP2712] >gi|428173740|gb|EKX42640.1| hypothetical protein GUITHDRAFT_111319 [Guillardia theta CCMP2712]) HSP 1 Score: 199.519 bits (506), Expect = 1.488e-58 Identity = 97/188 (51.60%), Postives = 133/188 (70.74%), Query Frame = 0
Query: 106 ELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVENGELAFSMVFKSDDTPY--RLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGER 291
++RGFSLA + LG+G IT+ S +Y + S L+ +GFVYG+PI L G +L+YA++ PV V++ + +F +K+ ++K++ DVTRHRYGDDAHLD++++ LGLV+ K FPQ+Q + E GELAF+MVF+S DTPY + W +P R+ RYETFFG V A V KV E RLVAIKL TGER
Sbjct: 84 QIRGFSLANLTLGLGIFITLFSFYQYFTNQNS--LTSLGFVYGLPIALGGFALKYAEILPVDVDTDERGEAIFAEKANEILRKVRADVTRHRYGDDAHLDSSLEKLGLVVEGKGFPQMQKIVIKNEGGELAFTMVFQSKDTPYKGKTWADPVRVKRYETFFGGDVNAEVIKVSKEERLVAIKLTTGER 269 The following BLAST results are available for this feature:
BLAST of EWM29288.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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