EWM29290.1, cds1396 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|585111813|gb|EWM29290.1| (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana]) HSP 1 Score: 1055.82 bits (2729), Expect = 0.000e+0 Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0
Query: 1 MADEETPLRPAISTSAGTSSSTASTAGTTPIRRPSFLLSKLPPPPPLEPETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEPPRRRGSIDVQLNRAPHPDGTNKGISASTRLLAPSKAVPILLQQKQQRRREEAGGGLAPGRPSSYQIDIVSDEVGTVSL 520
MADEETPLRPAISTSAGTSSSTASTAGTTPIRRPSFLLSKLPPPPPLEPETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEPPRRRGSIDVQLNRAPHPDGTNKGISASTRLLAPSKAVPILLQQKQQRRREEAGGGLAPGRPSSYQIDIVSDEVGTVSL
Sbjct: 1 MADEETPLRPAISTSAGTSSSTASTAGTTPIRRPSFLLSKLPPPPPLEPETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEPPRRRGSIDVQLNRAPHPDGTNKGISASTRLLAPSKAVPILLQQKQQRRREEAGGGLAPGRPSSYQIDIVSDEVGTVSL 520
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|470512099|ref|XP_004352099.1| (transmembrane protein [Acanthamoeba castellanii str. Neff] >gi|440802020|gb|ELR22960.1| transmembrane protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 194.897 bits (494), Expect = 1.134e-52 Identity = 118/343 (34.40%), Postives = 183/343 (53.35%), Query Frame = 0
Query: 53 AKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSA 395
AK T + +++ +Y F AN+V + + N+ +F NQF Y +LA ++ +K + P+ G D L ++G T +Q ++NQ IIPMT+ SF+ L R+ + GA I GA +A++P F + K + + PP +L++ S+ +P A SNV KE F Q +D+YY+ ++V+ Q+ + LP +P FGG+ +IP Q G+ C G NTLPGD C+ +L MYVL+NF +N+ LL+TKH ATL ++ AL LP+T +++ +IM + TE FN V+L VVL+GF +YSA
Sbjct: 42 AKLTPETLRILLYFFLLVLFGIANSVTGRYNQMKFGSNYAWFNNQFTTLTYCVLAQIITSYKYFFTNDITDEMKAFPVWKFFLFGVFDGLAGFLFSIGAPNTPATLQNIINQTIIPMTMVASFIVLRARYGLGKIGGAGIILAGAFVALIPLFTSNKNS-------DNPPAL-WYAILIYVSNNVPQALSNVTKELAFGQVVLDVYYMGSWVAWFQLGVSLSLLPVTMLPGFGGISASDIPDQIQNGYFCLLGWNTLPGDSCEYNYLFTGMYVLVNFGYNIFILLVTKHASATLFTLAFALRLPLTQVVYTLHFIMFQFTEDFNWETIVSLVVVLLGFAIYSA 376
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|544211333|ref|XP_005536066.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449016378|dbj|BAM79780.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 192.586 bits (488), Expect = 6.994e-52 Identity = 126/413 (30.51%), Postives = 201/413 (48.67%), Query Frame = 0
Query: 48 EPETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFG--GMPLREIPQQFTLGFKCFRGINTL----------------PGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEP 442
+P A + K L +Y A F + NAV+FK+M N PN+ +F +Q ++Y+ + LV+L KRV ++LP L F+G L+A I + +GG YT G Q +L Q IPMT+ S LG R+ Q + A I GA + + P + SGS L L+F ++ LP + ++VYKE+ + ++ + +++ Q L G + +P + +FG +PL ++P G KC G + L P D C+ A+L + +Y++ N L+NV +L+ KHGGATL + L LP+ +FAF M++ MG++ +P + +D V L V+L+G +Y W++ R + AA ER + PI EP
Sbjct: 8 KPSQPADRWLKQSVLGVYASALLFFSVWNAVFFKRMTNT-MPNYPYFLSQVTSWIYLPVLGLVLLFKRVFDRPSPLEDEELPQLKLAFVGLLEAIAGICTVLGGVYTRGTTQMILVQASIPMTMFWSACILGTRYVVHQFVAAGVIIGGALVVLTPRLIGIHS----SGSTSTGTVDLLFFNLVFLAAQLPQSLAHVYKEYALRGQEMSVFIVMFYIAWYQSLIGLSLIPVNSLRLFGPARVPLHDLPSLLLNGIKCLLGQDVLRTDCIIERGDDGTSLPPCDHCRGAWLPVLLYMIANILYNVFGILVIKHGGATLYTMLMTLRLPLVSFAFCMSFFMGDEAQPVDWYDLVGLVVILIGLCIYR-WEERAAHRTENE-------AATEASQALERDHEASANVAVGPILSEP 407
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|470465500|ref|XP_004341623.1| (transmembrane protein [Acanthamoeba castellanii str. Neff] >gi|440798469|gb|ELR19537.1| transmembrane protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 185.267 bits (469), Expect = 9.840e-49 Identity = 122/370 (32.97%), Postives = 192/370 (51.89%), Query Frame = 0
Query: 75 ANAVWFKKMLNAYRPNFEFFGNQFNVFLYV-----LLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLC------------LGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKC-FRGINTLPG----DDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLY----------SAWDDLVDRRKKQRKRLPI 412
AN V+FKKML N+ +F +Q + +Y+ ++ AL++ R+ + PL MG LDAT +L GG T+GA+Q LL Q +IP T+ S+L L R+ LGA I G +A++ +FL GA AG+ T+ G+++FF S P AFS VYKE F +D+YY+ +V Q L G FLP +P FGG+ EIP G +C F G N++ DDC+ A+ Y++ N +N++ LL+ K+G A LL +++A+ LP+ N AF++ +IMG++ +P+D L V+L+G ++Y ++ D +V K++ +P+
Sbjct: 89 ANRVFFKKMLIP-MVNYPYFISQLSTTVYIPIFWPVVWALMLFTSRITP-----EMRQFPLWKFLVMGALDATAGVLMIFGGNQTSGAMQQLLIQGVIPFTMFFSWLVSNPLVARILREKLNVRYRWGHYLGAFVIIAGIVVALLHAFLGSNGA-AGN---------TVFGIIVFFLSATPTAFSGVYKEIAFKGADLDIYYVNAWVCVFQFLVGLLFLPITAIPGFGGLTFSEIPDNLEDGARCLFTGHNSITTGKNVDDCEWAWTMTLGYIIANIAYNIVILLMLKYGSAALLYVASAVVLPLANIAFTLDFIMGKEATTLSPYDIAGLVVILIGLVIYRSTSEQAPPTTSADGVVSDEKREVTHVPV 442
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|585106919|gb|EWM25227.1| (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana]) HSP 1 Score: 168.703 bits (426), Expect = 7.785e-43 Identity = 108/310 (34.84%), Postives = 160/310 (51.61%), Query Frame = 0
Query: 74 AANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFG---GMPLREIPQQFTLGFKCFRGINTLPGDDCKDAF----LTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFN 376
+ NA+ +K M Y + FF + LY++ L++ + + + + LP MGFLD G+ L+ MG YT G+VQTLLNQ +IP T+ +S L F+ Q GA + +GA + ++P+F+ + + + +G G P + L+FF+S LP A S VYKE F + VD+ YLT +VS Q FG A P +P G G+PL IP F + CF P C + L + + +N +FN L ++KHG A L VI+ A+ LPVT FS+ +MG TEP +
Sbjct: 54 SCNALVYKIMYQVYGSDGAFFVSTGVNVLYIIYGGLLLYPRMLFTDSITPAMKALPKRRFIIMGFLDCCGTFLAAMGAVYTPGSVQTLLNQTLIPTTMIVSACFLRTHFSNVQLAGAALVLMGAAVTVLPAFITAE-SDSNNGHGASPSQSRWYANLVFFASNLPVACSQVYKERAFKRDSVDVLYLTQWVSVFQFFFGLALAPLQALPGIGSAHGVPLSSIPTAFLESWDCFL---EKPTSVCHGQWPAPSLLLLAFCAVNLVFNTGGLYVSKHGSAVLNVITYAVLLPVTTLIFSLRPLMGAFTEPLS 359
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|66818034|ref|XP_642710.1| (hypothetical protein DDB_G0277321 [Dictyostelium discoideum AX4] >gi|74856993|sp|Q550A6.1|CRTP2_DICDI RecName: Full=Crt homolog 2; AltName: Full=Chloroquine resistance transporter paralog 2; Short=DdCRTp2 >gi|60470875|gb|EAL68847.1| hypothetical protein DDB_G0277321 [Dictyostelium discoideum AX4]) HSP 1 Score: 167.162 bits (422), Expect = 2.733e-42 Identity = 116/369 (31.44%), Postives = 179/369 (48.51%), Query Frame = 0
Query: 50 ETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFS-----SILPGAFSNVYKEWGFAQFH-VDLYYLTTFVSAIQVLFGFAFLPALQ-VPIFGGMPLREIPQQFTLGFKCFRGINTL----------------------PGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVG 389
+ +K+T+ + +YV + N++ KK++N + N+ FF NQ + YV + +VL+K + + P MG LDA +GG T G +Q LLNQ +IP T+ LSF+ L +R++ Q GAL I G ++++PS G + G +LF++ S++P AFSNVYK GF+ +D++YL F + Q L G P +P M ++ Q G KC GINTL D+C A++ + +Y+ +N L+NV LL+ KH GAT+ I+ L LP+TN AFS +IMG D+ PF+ L ++L+G
Sbjct: 51 NSISKQTATVL---VYVVLYILSGVINSLLLKKVMNVFT-NYGFFLNQLTNYGYVPIFGAIVLYKILFTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTTGPLQQLLNQSVIPFTMLLSFIFLKERYSLIQLGGALIIIGGVVVSLIPSLTGGNTS----------------GNMLFYNFFYLISMIPYAFSNVYKAIGFSTVEDMDVWYLQYFDALYQSLVGTVLFPINNWLPPPSDMKFNQVIPQLKAGGKCLGGINTLIEQYNSTTGELLPTSCNYGDNLGCDNCHGAWVVVLIYMAVNVLYNVFILLVLKHAGATVFSIANTLRLPLTNIAFSFKFIMGSDSNPFSGLSVAGLCIILLG 399
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|873234205|emb|CEM02178.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 167.933 bits (424), Expect = 3.573e-42 Identity = 134/442 (30.32%), Postives = 206/442 (46.61%), Query Frame = 0
Query: 62 LAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLR--EIPQQFTLGFKCFRGINTL----------PGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKK------QRKRLPIQFAAGSV---MYLR---------ERADSDPSTPGYTPIRV----EPPRRRGSID---VQLNRAPHPDGTNKGI 466
LA Y ++ N+V+FKKM N PN+ +F Q +YV + +V++ +R G K P MG D+ I +GG T+G Q +L Q IP+TL + L L R+ Q +G+ I G I+ +PSF+A G P LLFF + +P A S+VYKE F +D+ L +V+A Q+L GF +P +P+ G + +IP F G KC GINT+ P D C A++ Y+L N +NV +L+ KHG A + + A L LP+T+ AF +++MG D D + L V++VG + Y W + + ++ +R+P+ AG+ +++R ER SD Y +RV + P+ R S D V P+P +G+
Sbjct: 76 LAAYSLGLLLSSVCNSVFFKKMTNGM-PNYGWFLTQLTTVIYVPIFLSLVIYTDMRGGITPEMK-SFPRRRFAVMGAFDSLAGICMVLGGVNTSGTTQVILQQATIPVTLLATVLALSIRYHWMQYMGSTVIIAGVLISKLPSFMAAPD--------PGAPKDQFFFNLLFFLASVPTALSSVYKEVAFRDVDLDVNLLQYWVAAFQLLIGFLLVPINTLPMLGEQRIEWVQIPAAFANGAKCLVGINTITEQCGGLHQPPCDACATAWIPTASYLLANVFYNVFTILVIKHGSAAISFLIATLRLPLTSMAFYSSFVMGADAMQPRATDFLGLLVIIVGLVGYR-WGGQLSKSQELTVSPPDTERVPVISIAGAQIEPLFVRRHRHIARTPERIRSDL----YAKLRVASVLDSPQMRPSADPYVVPDEEDPYPLAKEEGV 502
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|1013936804|gb|KYQ90502.1| (putative transmembrane protein [Dictyostelium lacteum]) HSP 1 Score: 165.622 bits (418), Expect = 6.969e-42 Identity = 125/411 (30.41%), Postives = 190/411 (46.23%), Query Frame = 0
Query: 32 RRPSFLLSKLPPPPPLEPETAAKKTSKAVKLA--------IYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFH-VDLYYLTTFVSAIQVLFGFAFLPALQV-PIFGGMPLREIPQQFTLGFKCFRGIN-----------------TLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKK----QRKRLP 411
+ LL+ P + AK ++A KL IYV N+V K ++N ++ N+ FF NQ + Y+ + VV +K ++ PL MG LDA +GG T+G +Q LLNQ IIP T+ SF+ L +RF+ Q LGAL I G I++VPS +G G + + + SI+P A SNVYK+ GF +D+++L + Q L G P + P +P + + G C G + L D+C +A++ + Y+ IN ++N+ LL+ KH GAT+ I+ L LP+TN FS+ +IM ++T PF+P L V+L+G Y A L +RR + Q K +P
Sbjct: 4 EKQPLLLNSDSNDQPQQTSLVAKLKAQAGKLLEKGTLTILIYVVLYITCGVINSVLLKSVMNTFQ-NYGFFLNQLTNYGYIPIFGSVVAYKVFFTNDIPKETKEFPLYKFAVMGALDALCGYFVVLGGISTSGPLQQLLNQAIIPFTMITSFIFLKERFSIYQMLGALVIVGGVVISLVPSL-----------TGSGNTGNKVFWNMFYLFSIVPYAASNVYKDIGFKSVDDMDVWWLQFWDGVFQSLIGTLLFPVNAILPPPATVPFKSVIPSLKNGTICLTGHDIWTQANSDCTLTQEANSNLVCDECTNAWVILLCYMTINVIYNIFILLVIKHAGATVFSIANTLRLPLTNIVFSLKFIMHKNTSPFSPLSVAGLIVILIGLGGYRAASILKNRRAQAGGAQIKFIP 402
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|66818599|ref|XP_642959.1| (hypothetical protein DDB_G0276943 [Dictyostelium discoideum AX4] >gi|74866600|sp|Q9GSB0.1|CRTP1_DICDI RecName: Full=Crt homolog 1; AltName: Full=Chloroquine resistance transporter paralog 1; Short=DdCRTp1 >gi|11139714|gb|AAG31811.1|AF317500_1 putative transporter protein SSA662 [Dictyostelium discoideum] >gi|60471003|gb|EAL68973.1| hypothetical protein DDB_G0276943 [Dictyostelium discoideum AX4]) HSP 1 Score: 165.622 bits (418), Expect = 8.876e-42 Identity = 117/368 (31.79%), Postives = 173/368 (47.01%), Query Frame = 0
Query: 49 PETAAKKTSK-AVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGF-AQFHVDLYYLTTFVSAIQVLFGFAFLPALQ-VPIFGGMPLREIPQQFTLGFKCFRGIN------------------------TLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVG 389
P+ SK + + IYV + N+V KK++N + N+ FF +Q F YV + V +K +D P MG LDA +GG T+G +Q LLNQ IIP T+ SF+ L +R++ Q GAL I G +++PS L G SG P + S++PGA SNVYK+ GF A +D++YL + S Q +FG P +P + +I G +C GIN T+ DDC +A++ + +Y+ IN ++N+ LL+ KH GAT+ I+ L LP+TN FS+ +IMG PF+ L ++LVG
Sbjct: 38 PQKIKNSMSKETITILIYVVLYVTSGVINSVLLKKVMNKFT-NYAFFLSQLTNFGYVPIFGAVTAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFLKERYSLIQLGGALVIIGGVVTSLIPSLLGGS-------SGGNKPFWNF----FYLLSVIPGALSNVYKDIGFQAVADMDVWYLQYWDSLYQSIFGLFLFPVNNWLPPPATVKFEQILPFMKEGAECLAGINSIIPSYINGTSSFTATSCTYAPDATITCDDCHNAWIVIILYMTINIIYNIFILLVLKHAGATVYSIANTLRLPLTNIVFSIHFIMGSAVSPFSGLSVAGLVIILVG 393
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|857971764|emb|CEP02258.1| (hypothetical protein PBRA_002523 [Plasmodiophora brassicae]) HSP 1 Score: 158.303 bits (399), Expect = 2.255e-39 Identity = 102/332 (30.72%), Postives = 166/332 (50.00%), Query Frame = 0
Query: 72 TAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYV-LLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFG--GMPLREIPQQFTLGFKCFRGINTLPG-------DDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLY 393
++ N+ +FK M++ + N+ F +Q +Y+ + ALV+L K + + P S MG LD+ IL T GG T+G++Q LL Q +IP TL LS + L R++ Q GA I G + +VP L + ++F S++P AFS+V+KE F +D+ YL +V+ QV FG P V + G +PL++IP G KC G+NT+ D C A++ + Y+ N L+N+ +L+ KHG A L+ + L LP+ F++ ++ G +PF+ + + L V+L+G +Y
Sbjct: 40 SSVGNSTFFKLMIDKFH-NYALFISQITSLVYIPVFGALVLLSKDITP-----EMRAFPKSKFFVMGALDSMAGILMTFGGIMTSGSLQALLMQALIPTTLILSVIVLRTRYSRLQYCGAFIIVAGVCVVLVPQALQPSDTK-----------NNFVFNIIFLLSVIPQAFSSVFKEIAFDDAELDVNYLQYWVAVWQVAFGLVVAPVNSVKLLGPAAVPLKDIPMAIWNGAKCMCGVNTVLASATNAIPDSCAGAWIPLSAYIAFNLLYNISIMLVIKHGSAALMYFAMTLRLPIIQVVFALPFMPG-GGQPFSLYAVIGLFVILLGLSIY 353 The following BLAST results are available for this feature:
BLAST of EWM29290.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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