EWM29290.1, cds1396 (CDS) Nannochloropsis gaditana

Overview
NameEWM29290.1
Unique Namecds1396
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:544926..545127 +
Alignment locationCM002457.1:545287..546647 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29290.1
ProductTransmembrane transporter protein, chloroquine resistant
Orig transcript idgnl|cribi|Naga_100029g27.9547.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:544926..545127 +
CM002457.1supercontigCM002457.1:545287..546647 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR009262SLC35_F1/F2/F6
Homology
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|585111813|gb|EWM29290.1| (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana])

HSP 1 Score: 1055.82 bits (2729), Expect = 0.000e+0
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0
Query:    1 MADEETPLRPAISTSAGTSSSTASTAGTTPIRRPSFLLSKLPPPPPLEPETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEPPRRRGSIDVQLNRAPHPDGTNKGISASTRLLAPSKAVPILLQQKQQRRREEAGGGLAPGRPSSYQIDIVSDEVGTVSL 520
            MADEETPLRPAISTSAGTSSSTASTAGTTPIRRPSFLLSKLPPPPPLEPETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEPPRRRGSIDVQLNRAPHPDGTNKGISASTRLLAPSKAVPILLQQKQQRRREEAGGGLAPGRPSSYQIDIVSDEVGTVSL
Sbjct:    1 MADEETPLRPAISTSAGTSSSTASTAGTTPIRRPSFLLSKLPPPPPLEPETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEPPRRRGSIDVQLNRAPHPDGTNKGISASTRLLAPSKAVPILLQQKQQRRREEAGGGLAPGRPSSYQIDIVSDEVGTVSL 520          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|470512099|ref|XP_004352099.1| (transmembrane protein [Acanthamoeba castellanii str. Neff] >gi|440802020|gb|ELR22960.1| transmembrane protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 194.897 bits (494), Expect = 1.134e-52
Identity = 118/343 (34.40%), Postives = 183/343 (53.35%), Query Frame = 0
Query:   53 AKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSA 395
            AK T + +++ +Y F       AN+V  +     +  N+ +F NQF    Y +LA ++  +K           +  P+      G  D     L ++G   T   +Q ++NQ IIPMT+  SF+ L  R+   +  GA  I  GA +A++P F + K +       + PP      +L++ S+ +P A SNV KE  F Q  +D+YY+ ++V+  Q+    + LP   +P FGG+   +IP Q   G+ C  G NTLPGD C+  +L   MYVL+NF +N+  LL+TKH  ATL  ++ AL LP+T   +++ +IM + TE FN    V+L VVL+GF +YSA
Sbjct:   42 AKLTPETLRILLYFFLLVLFGIANSVTGRYNQMKFGSNYAWFNNQFTTLTYCVLAQIITSYKYFFTNDITDEMKAFPVWKFFLFGVFDGLAGFLFSIGAPNTPATLQNIINQTIIPMTMVASFIVLRARYGLGKIGGAGIILAGAFVALIPLFTSNKNS-------DNPPAL-WYAILIYVSNNVPQALSNVTKELAFGQVVLDVYYMGSWVAWFQLGVSLSLLPVTMLPGFGGISASDIPDQIQNGYFCLLGWNTLPGDSCEYNYLFTGMYVLVNFGYNIFILLVTKHASATLFTLAFALRLPLTQVVYTLHFIMFQFTEDFNWETIVSLVVVLLGFAIYSA 376          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|544211333|ref|XP_005536066.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449016378|dbj|BAM79780.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 192.586 bits (488), Expect = 6.994e-52
Identity = 126/413 (30.51%), Postives = 201/413 (48.67%), Query Frame = 0
Query:   48 EPETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFG--GMPLREIPQQFTLGFKCFRGINTL----------------PGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEP 442
            +P   A +  K   L +Y  A  F +  NAV+FK+M N   PN+ +F +Q   ++Y+ +  LV+L KRV         ++LP   L F+G L+A   I + +GG YT G  Q +L Q  IPMT+  S   LG R+   Q + A  I  GA + + P  +        SGS        L   L+F ++ LP + ++VYKE+      + ++ +  +++  Q L G + +P   + +FG   +PL ++P     G KC  G + L                P D C+ A+L + +Y++ N L+NV  +L+ KHGGATL  +   L LP+ +FAF M++ MG++ +P + +D V L V+L+G  +Y  W++    R +         AA       ER     +     PI  EP
Sbjct:    8 KPSQPADRWLKQSVLGVYASALLFFSVWNAVFFKRMTNT-MPNYPYFLSQVTSWIYLPVLGLVLLFKRVFDRPSPLEDEELPQLKLAFVGLLEAIAGICTVLGGVYTRGTTQMILVQASIPMTMFWSACILGTRYVVHQFVAAGVIIGGALVVLTPRLIGIHS----SGSTSTGTVDLLFFNLVFLAAQLPQSLAHVYKEYALRGQEMSVFIVMFYIAWYQSLIGLSLIPVNSLRLFGPARVPLHDLPSLLLNGIKCLLGQDVLRTDCIIERGDDGTSLPPCDHCRGAWLPVLLYMIANILYNVFGILVIKHGGATLYTMLMTLRLPLVSFAFCMSFFMGDEAQPVDWYDLVGLVVILIGLCIYR-WEERAAHRTENE-------AATEASQALERDHEASANVAVGPILSEP 407          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|470465500|ref|XP_004341623.1| (transmembrane protein [Acanthamoeba castellanii str. Neff] >gi|440798469|gb|ELR19537.1| transmembrane protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 185.267 bits (469), Expect = 9.840e-49
Identity = 122/370 (32.97%), Postives = 192/370 (51.89%), Query Frame = 0
Query:   75 ANAVWFKKMLNAYRPNFEFFGNQFNVFLYV-----LLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLC------------LGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKC-FRGINTLPG----DDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLY----------SAWDDLVDRRKKQRKRLPI 412
            AN V+FKKML     N+ +F +Q +  +Y+     ++ AL++   R+         +  PL     MG LDAT  +L   GG  T+GA+Q LL Q +IP T+  S+L             L  R+     LGA  I  G  +A++ +FL   GA AG+         T+ G+++FF S  P AFS VYKE  F    +D+YY+  +V   Q L G  FLP   +P FGG+   EIP     G +C F G N++      DDC+ A+     Y++ N  +N++ LL+ K+G A LL +++A+ LP+ N AF++ +IMG++    +P+D   L V+L+G ++Y          ++ D +V   K++   +P+
Sbjct:   89 ANRVFFKKMLIP-MVNYPYFISQLSTTVYIPIFWPVVWALMLFTSRITP-----EMRQFPLWKFLVMGALDATAGVLMIFGGNQTSGAMQQLLIQGVIPFTMFFSWLVSNPLVARILREKLNVRYRWGHYLGAFVIIAGIVVALLHAFLGSNGA-AGN---------TVFGIIVFFLSATPTAFSGVYKEIAFKGADLDIYYVNAWVCVFQFLVGLLFLPITAIPGFGGLTFSEIPDNLEDGARCLFTGHNSITTGKNVDDCEWAWTMTLGYIIANIAYNIVILLMLKYGSAALLYVASAVVLPLANIAFTLDFIMGKEATTLSPYDIAGLVVILIGLVIYRSTSEQAPPTTSADGVVSDEKREVTHVPV 442          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|585106919|gb|EWM25227.1| (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana])

HSP 1 Score: 168.703 bits (426), Expect = 7.785e-43
Identity = 108/310 (34.84%), Postives = 160/310 (51.61%), Query Frame = 0
Query:   74 AANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFG---GMPLREIPQQFTLGFKCFRGINTLPGDDCKDAF----LTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFN 376
            + NA+ +K M   Y  +  FF +     LY++   L++  + +   +     + LP      MGFLD  G+ L+ MG  YT G+VQTLLNQ +IP T+ +S   L   F+  Q  GA  + +GA + ++P+F+  + + + +G G  P  +     L+FF+S LP A S VYKE  F +  VD+ YLT +VS  Q  FG A  P   +P  G   G+PL  IP  F   + CF      P   C   +    L +  +  +N +FN   L ++KHG A L VI+ A+ LPVT   FS+  +MG  TEP +
Sbjct:   54 SCNALVYKIMYQVYGSDGAFFVSTGVNVLYIIYGGLLLYPRMLFTDSITPAMKALPKRRFIIMGFLDCCGTFLAAMGAVYTPGSVQTLLNQTLIPTTMIVSACFLRTHFSNVQLAGAALVLMGAAVTVLPAFITAE-SDSNNGHGASPSQSRWYANLVFFASNLPVACSQVYKERAFKRDSVDVLYLTQWVSVFQFFFGLALAPLQALPGIGSAHGVPLSSIPTAFLESWDCFL---EKPTSVCHGQWPAPSLLLLAFCAVNLVFNTGGLYVSKHGSAVLNVITYAVLLPVTTLIFSLRPLMGAFTEPLS 359          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|66818034|ref|XP_642710.1| (hypothetical protein DDB_G0277321 [Dictyostelium discoideum AX4] >gi|74856993|sp|Q550A6.1|CRTP2_DICDI RecName: Full=Crt homolog 2; AltName: Full=Chloroquine resistance transporter paralog 2; Short=DdCRTp2 >gi|60470875|gb|EAL68847.1| hypothetical protein DDB_G0277321 [Dictyostelium discoideum AX4])

HSP 1 Score: 167.162 bits (422), Expect = 2.733e-42
Identity = 116/369 (31.44%), Postives = 179/369 (48.51%), Query Frame = 0
Query:   50 ETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFS-----SILPGAFSNVYKEWGFAQFH-VDLYYLTTFVSAIQVLFGFAFLPALQ-VPIFGGMPLREIPQQFTLGFKCFRGINTL----------------------PGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVG 389
             + +K+T+  +   +YV     +   N++  KK++N +  N+ FF NQ   + YV +   +VL+K +         +  P      MG LDA       +GG  T G +Q LLNQ +IP T+ LSF+ L +R++  Q  GAL I  G  ++++PS   G  +                G +LF++     S++P AFSNVYK  GF+    +D++YL  F +  Q L G    P    +P    M   ++  Q   G KC  GINTL                        D+C  A++ + +Y+ +N L+NV  LL+ KH GAT+  I+  L LP+TN AFS  +IMG D+ PF+      L ++L+G
Sbjct:   51 NSISKQTATVL---VYVVLYILSGVINSLLLKKVMNVFT-NYGFFLNQLTNYGYVPIFGAIVLYKILFTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTTGPLQQLLNQSVIPFTMLLSFIFLKERYSLIQLGGALIIIGGVVVSLIPSLTGGNTS----------------GNMLFYNFFYLISMIPYAFSNVYKAIGFSTVEDMDVWYLQYFDALYQSLVGTVLFPINNWLPPPSDMKFNQVIPQLKAGGKCLGGINTLIEQYNSTTGELLPTSCNYGDNLGCDNCHGAWVVVLIYMAVNVLYNVFILLVLKHAGATVFSIANTLRLPLTNIAFSFKFIMGSDSNPFSGLSVAGLCIILLG 399          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|873234205|emb|CEM02178.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 167.933 bits (424), Expect = 3.573e-42
Identity = 134/442 (30.32%), Postives = 206/442 (46.61%), Query Frame = 0
Query:   62 LAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLR--EIPQQFTLGFKCFRGINTL----------PGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKK------QRKRLPIQFAAGSV---MYLR---------ERADSDPSTPGYTPIRV----EPPRRRGSID---VQLNRAPHPDGTNKGI 466
            LA Y      ++  N+V+FKKM N   PN+ +F  Q    +YV +   +V++  +R G     K   P      MG  D+   I   +GG  T+G  Q +L Q  IP+TL  + L L  R+   Q +G+  I  G  I+ +PSF+A            G P       LLFF + +P A S+VYKE  F    +D+  L  +V+A Q+L GF  +P   +P+ G   +   +IP  F  G KC  GINT+          P D C  A++    Y+L N  +NV  +L+ KHG A +  + A L LP+T+ AF  +++MG D       D + L V++VG + Y  W   + + ++        +R+P+   AG+    +++R         ER  SD     Y  +RV    + P+ R S D   V     P+P    +G+
Sbjct:   76 LAAYSLGLLLSSVCNSVFFKKMTNGM-PNYGWFLTQLTTVIYVPIFLSLVIYTDMRGGITPEMK-SFPRRRFAVMGAFDSLAGICMVLGGVNTSGTTQVILQQATIPVTLLATVLALSIRYHWMQYMGSTVIIAGVLISKLPSFMAAPD--------PGAPKDQFFFNLLFFLASVPTALSSVYKEVAFRDVDLDVNLLQYWVAAFQLLIGFLLVPINTLPMLGEQRIEWVQIPAAFANGAKCLVGINTITEQCGGLHQPPCDACATAWIPTASYLLANVFYNVFTILVIKHGSAAISFLIATLRLPLTSMAFYSSFVMGADAMQPRATDFLGLLVIIVGLVGYR-WGGQLSKSQELTVSPPDTERVPVISIAGAQIEPLFVRRHRHIARTPERIRSDL----YAKLRVASVLDSPQMRPSADPYVVPDEEDPYPLAKEEGV 502          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|1013936804|gb|KYQ90502.1| (putative transmembrane protein [Dictyostelium lacteum])

HSP 1 Score: 165.622 bits (418), Expect = 6.969e-42
Identity = 125/411 (30.41%), Postives = 190/411 (46.23%), Query Frame = 0
Query:   32 RRPSFLLSKLPPPPPLEPETAAKKTSKAVKLA--------IYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFH-VDLYYLTTFVSAIQVLFGFAFLPALQV-PIFGGMPLREIPQQFTLGFKCFRGIN-----------------TLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKK----QRKRLP 411
             +   LL+      P +    AK  ++A KL         IYV         N+V  K ++N ++ N+ FF NQ   + Y+ +   VV +K           ++ PL     MG LDA       +GG  T+G +Q LLNQ IIP T+  SF+ L +RF+  Q LGAL I  G  I++VPS            +G G     +   + +  SI+P A SNVYK+ GF     +D+++L  +    Q L G    P   + P    +P + +      G  C  G +                  L  D+C +A++ +  Y+ IN ++N+  LL+ KH GAT+  I+  L LP+TN  FS+ +IM ++T PF+P     L V+L+G   Y A   L +RR +    Q K +P
Sbjct:    4 EKQPLLLNSDSNDQPQQTSLVAKLKAQAGKLLEKGTLTILIYVVLYITCGVINSVLLKSVMNTFQ-NYGFFLNQLTNYGYIPIFGSVVAYKVFFTNDIPKETKEFPLYKFAVMGALDALCGYFVVLGGISTSGPLQQLLNQAIIPFTMITSFIFLKERFSIYQMLGALVIVGGVVISLVPSL-----------TGSGNTGNKVFWNMFYLFSIVPYAASNVYKDIGFKSVDDMDVWWLQFWDGVFQSLIGTLLFPVNAILPPPATVPFKSVIPSLKNGTICLTGHDIWTQANSDCTLTQEANSNLVCDECTNAWVILLCYMTINVIYNIFILLVIKHAGATVFSIANTLRLPLTNIVFSLKFIMHKNTSPFSPLSVAGLIVILIGLGGYRAASILKNRRAQAGGAQIKFIP 402          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|66818599|ref|XP_642959.1| (hypothetical protein DDB_G0276943 [Dictyostelium discoideum AX4] >gi|74866600|sp|Q9GSB0.1|CRTP1_DICDI RecName: Full=Crt homolog 1; AltName: Full=Chloroquine resistance transporter paralog 1; Short=DdCRTp1 >gi|11139714|gb|AAG31811.1|AF317500_1 putative transporter protein SSA662 [Dictyostelium discoideum] >gi|60471003|gb|EAL68973.1| hypothetical protein DDB_G0276943 [Dictyostelium discoideum AX4])

HSP 1 Score: 165.622 bits (418), Expect = 8.876e-42
Identity = 117/368 (31.79%), Postives = 173/368 (47.01%), Query Frame = 0
Query:   49 PETAAKKTSK-AVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGF-AQFHVDLYYLTTFVSAIQVLFGFAFLPALQ-VPIFGGMPLREIPQQFTLGFKCFRGIN------------------------TLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVG 389
            P+      SK  + + IYV     +   N+V  KK++N +  N+ FF +Q   F YV +   V  +K           +D P      MG LDA       +GG  T+G +Q LLNQ IIP T+  SF+ L +R++  Q  GAL I  G   +++PS L G        SG   P         +  S++PGA SNVYK+ GF A   +D++YL  + S  Q +FG    P    +P    +   +I      G +C  GIN                        T+  DDC +A++ + +Y+ IN ++N+  LL+ KH GAT+  I+  L LP+TN  FS+ +IMG    PF+      L ++LVG
Sbjct:   38 PQKIKNSMSKETITILIYVVLYVTSGVINSVLLKKVMNKFT-NYAFFLSQLTNFGYVPIFGAVTAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFLKERYSLIQLGGALVIIGGVVTSLIPSLLGGS-------SGGNKPFWNF----FYLLSVIPGALSNVYKDIGFQAVADMDVWYLQYWDSLYQSIFGLFLFPVNNWLPPPATVKFEQILPFMKEGAECLAGINSIIPSYINGTSSFTATSCTYAPDATITCDDCHNAWIVIILYMTINIIYNIFILLVLKHAGATVYSIANTLRLPLTNIVFSIHFIMGSAVSPFSGLSVAGLVIILVG 393          
BLAST of EWM29290.1 vs. NCBI_GenBank
Match: gi|857971764|emb|CEP02258.1| (hypothetical protein PBRA_002523 [Plasmodiophora brassicae])

HSP 1 Score: 158.303 bits (399), Expect = 2.255e-39
Identity = 102/332 (30.72%), Postives = 166/332 (50.00%), Query Frame = 0
Query:   72 TAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYV-LLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARAGSGSGEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFG--GMPLREIPQQFTLGFKCFRGINTLPG-------DDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLY 393
            ++  N+ +FK M++ +  N+  F +Q    +Y+ +  ALV+L K +         +  P S    MG LD+   IL T GG  T+G++Q LL Q +IP TL LS + L  R++  Q  GA  I  G  + +VP  L     +                 ++F  S++P AFS+V+KE  F    +D+ YL  +V+  QV FG    P   V + G   +PL++IP     G KC  G+NT+         D C  A++ +  Y+  N L+N+  +L+ KHG A L+  +  L LP+    F++ ++ G   +PF+ +  + L V+L+G  +Y
Sbjct:   40 SSVGNSTFFKLMIDKFH-NYALFISQITSLVYIPVFGALVLLSKDITP-----EMRAFPKSKFFVMGALDSMAGILMTFGGIMTSGSLQALLMQALIPTTLILSVIVLRTRYSRLQYCGAFIIVAGVCVVLVPQALQPSDTK-----------NNFVFNIIFLLSVIPQAFSSVFKEIAFDDAELDVNYLQYWVAVWQVAFGLVVAPVNSVKLLGPAAVPLKDIPMAIWNGAKCMCGVNTVLASATNAIPDSCAGAWIPLSAYIAFNLLYNISIMLVIKHGSAALMYFAMTLRLPIIQVVFALPFMPG-GGQPFSLYAVIGLFVILLGLSIY 353          
The following BLAST results are available for this feature:
BLAST of EWM29290.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111813|gb|EWM29290.1|0.000e+0100.00Transmembrane transporter protein, chloroquine res... [more]
gi|470512099|ref|XP_004352099.1|1.134e-5234.40transmembrane protein [Acanthamoeba castellanii st... [more]
gi|544211333|ref|XP_005536066.1|6.994e-5230.51hypothetical protein, conserved [Cyanidioschyzon m... [more]
gi|470465500|ref|XP_004341623.1|9.840e-4932.97transmembrane protein [Acanthamoeba castellanii st... [more]
gi|585106919|gb|EWM25227.1|7.785e-4334.84Transmembrane transporter protein, chloroquine res... [more]
gi|66818034|ref|XP_642710.1|2.733e-4231.44hypothetical protein DDB_G0277321 [Dictyostelium d... [more]
gi|873234205|emb|CEM02178.1|3.573e-4230.32unnamed protein product [Vitrella brassicaformis C... [more]
gi|1013936804|gb|KYQ90502.1|6.969e-4230.41putative transmembrane protein [Dictyostelium lact... [more]
gi|66818599|ref|XP_642959.1|8.876e-4231.79hypothetical protein DDB_G0276943 [Dictyostelium d... [more]
gi|857971764|emb|CEP02258.1|2.255e-3930.72hypothetical protein PBRA_002523 [Plasmodiophora b... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1398rna1398Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications