EWM29286.1, cds1394 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|585111809|gb|EWM29286.1| (protein of unknown function DUF1084 [Nannochloropsis gaditana]) HSP 1 Score: 920.228 bits (2377), Expect = 0.000e+0 Identity = 454/454 (100.00%), Postives = 454/454 (100.00%), Query Frame = 0
Query: 1 MVFRDHGALYLCHSILSMRVNGVLYSVCSLYKGASLKPDYDGTSRLSHHHLPVPPPTLLPLIKHSAMREWLLLPDAALFLGVAGLCFLERVRSKEDSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALFEAHNCPSLWTCAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDVLSHGEALQSFFMLLGLSYLVSFLFVLKFAHQFSRMALPYLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNRRRGQLPTPLAAAYPYLGAGPYTKIGSGDHAHGSGLGPGSNGLGGGSQSAALASAFYRHNGPRKGDGGGQRSGRQTTHEDRHHQKHFWMNMVVKEGQEARGGSGMMGLMGIYTPHEATTTPSISSESTASAYQAVP 454
MVFRDHGALYLCHSILSMRVNGVLYSVCSLYKGASLKPDYDGTSRLSHHHLPVPPPTLLPLIKHSAMREWLLLPDAALFLGVAGLCFLERVRSKEDSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALFEAHNCPSLWTCAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDVLSHGEALQSFFMLLGLSYLVSFLFVLKFAHQFSRMALPYLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNRRRGQLPTPLAAAYPYLGAGPYTKIGSGDHAHGSGLGPGSNGLGGGSQSAALASAFYRHNGPRKGDGGGQRSGRQTTHEDRHHQKHFWMNMVVKEGQEARGGSGMMGLMGIYTPHEATTTPSISSESTASAYQAVP
Sbjct: 1 MVFRDHGALYLCHSILSMRVNGVLYSVCSLYKGASLKPDYDGTSRLSHHHLPVPPPTLLPLIKHSAMREWLLLPDAALFLGVAGLCFLERVRSKEDSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALFEAHNCPSLWTCAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDVLSHGEALQSFFMLLGLSYLVSFLFVLKFAHQFSRMALPYLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNRRRGQLPTPLAAAYPYLGAGPYTKIGSGDHAHGSGLGPGSNGLGGGSQSAALASAFYRHNGPRKGDGGGQRSGRQTTHEDRHHQKHFWMNMVVKEGQEARGGSGMMGLMGIYTPHEATTTPSISSESTASAYQAVP 454
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|813126618|ref|XP_012197083.1| (hypothetical protein SPRG_03100 [Saprolegnia parasitica CBS 223.65] >gi|641538050|gb|KDO31884.1| hypothetical protein SPRG_03100 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 79.7221 bits (195), Expect = 1.226e-12 Identity = 78/288 (27.08%), Postives = 121/288 (42.01%), Query Frame = 0
Query: 69 EWLLLPDAALFLGVAGLCFLERVRSKE-------DSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALF---------------EAHNCPSLWTCAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDVLSHGEALQSFFMLLGLSYLVSFLFVLKFA------------------------HQFSRMALP-YLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLP 309
W+ LP LFLG++ +C +R + + +M SAG E R+R +LLL+A R V L V+ + N W ++ +P L F++TYSLL+LF+AQL G P + N LY GF++++ A S + Q LG Y+ FL +L ++ H R P ++ RR++ + +C +FL IY L + T + SW + P + YIF+ +Y L E LP
Sbjct: 6 SWVFLPGIGLFLGLS-ICAFVALRGESRHAAGAMELEMGEISAGAETRKRFFVLLLIAASARLVSLSVDLVALSLSPGDSDLAFLPRKNSTNASIAWVSSIFSLLPCLFFVSTYSLLILFYAQLCTACYGLSFPLHKAAYFACNLVLYVGFVVLM-FATHSTGSFWKWTQG---GLGCFYICGFLAILYYSGRLVVFFKSTHVEDDFFFDMDVSTHASFRGLTPRQIVVRRIMLICAMCCALFLGLGIYLLCMATAAIPSWHDQYRTPAGLDPYIFELGVYILSEFLP 288
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|1173937530|gb|OQR88305.1| (hypothetical protein ACHHYP_06973 [Achlya hypogyna]) HSP 1 Score: 79.337 bits (194), Expect = 1.237e-12 Identity = 78/292 (26.71%), Postives = 121/292 (41.44%), Query Frame = 0
Query: 69 EWLLLPDAALFLGVAGLCFL-----ERVRSKEDSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALF---------------EAHNCPSLWTCAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGF--LLIVAMAAGDVLSHGEALQSFFMLLGLSYLV-----------------SFLFVLKF-AHQFSRMALP-YLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNR 319
W+ LP LFLG++ FL R + +M SAG E R+R +LLLV+ + R V L V+ + N W ++ +P LLF++TYSLL+LF+AQL G P ++ N LY GF L+ + G E F +LG ++ F F + AH R P ++ RR++ + +C +F IY L + T + SW + P + Y+F+ +Y E +P +L +R
Sbjct: 6 SWVFLPGIGLFLGLSICAFLALRGESRRAVASELEMGEISAGAETRKRFFVLLLVSAIARLVSLCVDLIALSLSPEGSDLAFLPRKNSTNEDIAWVSSIFSLLPCLLFVSTYSLLILFYAQLCTACYGLSFPFHKGVYVAVNVLLYVGFVVLMFACHSTGAFWKWTEGGLGCFYILGFLAILYYSARLILFFKATHVEDDFFFDMDVSAHSSYRGLTPRQIVVRRIMLICGMCCALFAGLGIYLLCMATARIPSWHDQYRTPSALDPYVFELGVYIASEFVPCALLLYFTHR 297
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|669142674|ref|XP_008606899.1| (hypothetical protein SDRG_03058 [Saprolegnia diclina VS20] >gi|530741385|gb|EQC39627.1| hypothetical protein SDRG_03058 [Saprolegnia diclina VS20]) HSP 1 Score: 78.9518 bits (193), Expect = 2.350e-12 Identity = 79/298 (26.51%), Postives = 124/298 (41.61%), Query Frame = 0
Query: 69 EWLLLPDAALFLGVAGLCFLERVRSKE-------DSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALF---------------EAHNCPSLWTCAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDVLSHGEALQSFFMLLGLSYLVSFLFVLKFA------------------------HQFSRMALP-YLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNR 319
W+ LP LFLG++ +C +R + + +M SAG E R+R +LLL+A R V L V+ N W ++ +P L F++TYSLL+LF+AQL G P + N LY GF++++ A S + Q LG Y+ FL +L ++ H R P ++ RR++ + +C +FL +Y L + T + SW + P + YIF+ +Y L E LP +L +R
Sbjct: 6 SWVFLPGIGLFLGLS-ICTFVALRGESRHAAGAMELEMGEISAGAETRKRFFVLLLIAASARLVSLSVDLVALSLSPGDSDLAFLPRKNTTNASIAWVSSIFSLLPCLFFVSTYSLLILFYAQLCTACYGLSFPLHKAAYFACNLLLYVGFVVLM-FATHSTGSFWKWTQGG---LGCFYICGFLAILYYSGRLVVFFRSTHVEDDFFFDMDVSMHASFRGLTPRQIVVRRIMLICAMCCALFLGLGVYLLCMATAAIPSWHDQYRTPAGLDPYIFELGVYILTEFLPCALLLYFTHR 298
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|325184018|emb|CCA18475.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 79.7221 bits (195), Expect = 2.394e-12 Identity = 86/322 (26.71%), Postives = 132/322 (40.99%), Query Frame = 0
Query: 94 KEDSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVE---------------TALFEAHNCP---SLWTCAVVRCVPDLLFLTTYSLLLLFWAQLGRT--ARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDVLSHGEALQSFFMLLGLSYLVSFLFVLKFA----------------------HQFSRMALPYLLR---------------RRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNRRRGQLP------TPLAAAYPYLGAGPYTKIGSGDHAHGS 352
KE+ +A+ S G EMR+R LLL +A+ R LI E L + H+ W A+V +P LLF+T Y L+LLFWAQL + R P PR + F+ N LY+ F + + + S G + ++LG YL+ F +L ++ Q S Y R RR+ A+ ++ +F+ IY + +GTG L S A+ P F+ ++Y E +P A+L R++ + P TP+AA AG Y + + S
Sbjct: 116 KEEEHIASQSTGSEMRQRFFLLLFIASTIRLCSLISEIGTLSIIPEASPDQSEKLTDTHSALLSFGQWLLAIVIWIPSLLFVTMYGLVLLFWAQLCYSCWKRAYPWPR-RIFFAF-NVLLYSTFFMTITLTK----SVGGFWRICDIVLGSIYLIGFFTILYYSLRLIWFFKSQQQDEECLLTLSGSQESGRTFHYRPRLSSMAGKSSPQQAVLRRITAVCVILCVLFVTKAIYLVGMGTGYLPSQEAKYHLPVGVHHIAFEFVMYFATEFVPC-ALLTFFTRKQEENPLDHLKFTPVAATV----AGTYRSLNADSRKASS 426
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|695465315|ref|XP_009539149.1| (hypothetical protein PHYSODRAFT_566527 [Phytophthora sojae] >gi|348665789|gb|EGZ05618.1| hypothetical protein PHYSODRAFT_566527 [Phytophthora sojae]) HSP 1 Score: 78.1814 bits (191), Expect = 6.116e-12 Identity = 72/242 (29.75%), Postives = 114/242 (47.11%), Query Frame = 0
Query: 95 EDSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALFE-AHNCPSLWT-CAVVRC---VPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAG--------DVLSHGEALQSFFMLLGLSYLVSFLFVLKFAHQ--FSRMALP-YLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNRR 320
E+ A S G EMR+R+ LLL VA+ R L+ E A E PS C ++ +P +LF++ Y L+LLFWAQL G P +F L N LY GF L+ A+++ D+L G F +L S + F + + F ++ P L+ RR+ A+ +L +F V +Y + +GTG + S ++ P ++ ++ E +PS A+L R+
Sbjct: 97 EEEGAAAASTGSEMRQRLYLLLFVASTLRVCSLVTEVATLEKVAALPSTSVYCKLLTLFLWLPSMLFVSMYGLVLLFWAQLCYACWGKAHPWPRRVFFLFNVLLYVGFALLFALSSTSAGLWRGCDLLQGGVYFVGLFGILYYSIRLIDFFRNQSPDEDFFFDLSSPRQLVLRRITAVCILLCVLFAVKAVYLIGMGTGYMESEESQYRTPVGVHHIAYEFTIHFSTEFVPS-ALLLFFTRQ 337
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|873235299|emb|CEM00769.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 77.411 bits (189), Expect = 9.745e-12 Identity = 65/218 (29.82%), Postives = 107/218 (49.08%), Query Frame = 0
Query: 120 NLTRCVCLIVETALFEAHNCPSL--WTCAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDVLSHGEALQSF-FMLLGLSYLVS----FLFVLKFAHQFS----RMALPYLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVL-NRRRGQLP 325
N R L ++ L + + SL W + R +P L+FL+TYS+L+ FWAQ+ + A P L F N +Y + +I + +L E +++ L+G+ YL F++ +K + Q S ++ + RRV+ALS+ C +F + Y L+ G ++ + YP +I+DAI+Y E +PSL +L RR QLP
Sbjct: 3 NTVRAFSLGLQLVLMSSISQASLMTWFTYLFRSLPSLIFLSTYSVLIYFWAQVYQAATLVSTPLLRPTFIFVNIAVYCIYAVITVLTL--LLHAYEEYRTYSIFLIGVIYLAVSVGFFVYGMKVSGQLSDRSRQLHRKNFIIRRVMALSVACPIIFSLRGFYCLAFSFGFISKY-----YPQGISRFIWDAIIYMTSEWVPSLLMLFFFWPRRSHQLP 213
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|294941934|ref|XP_002783313.1| (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >gi|239895728|gb|EER15109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 76.6406 bits (187), Expect = 1.082e-11 Identity = 80/309 (25.89%), Postives = 135/309 (43.69%), Query Frame = 0
Query: 41 DGTSRLSHHHLPVPPPTLLPLIK-HSAMREWLLLPDAALFLGVAGLCFLERVRSKE------DSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALFEA------HNCPSLWTCAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDVLSHGEALQSFFMLLGLSYLVS----FLFVLKFAHQF---------------SRMALPYLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVL 317
D S ++P P LPL HSA WL D LF+ + + + ++ K D+ A + G R+ + L ++NL R V +IV+ + + WT P LLFL+TYS+++LFWAQ+ A P L + N +Y F++I A+ H + Q F ++GL YL+ F + ++ A Q + + + + RVL L++ C +FL+ + L G G++ ++ P + +D+++Y + E +PSL IL V
Sbjct: 2 DTLSTAQPENIP-PNYEDLPLFTPHSAKASWLAYGDCVLFMLIVAVIAGQLIQQKRAERRGGDAAPAVSLTGSHTRKLFLIGLCLSNLARAVSMIVDAVVHNEVREHVWEHSVQGWTNYCFMDFPSLLFLSTYSIVILFWAQVYYAAILVSYPLLRPLCIFFNIAVYGVFVIISAVTFLLEAWHQYS-QYIFFIVGLLYLLCAILFFYYGIQVAVQLKDRSRRQRSMAGVSPTEASNNHAVLSRVLILTVTCPLIFLIRGMLCLLYGVGVMKTY-----GPSNVDRLAWDSLVYCITEWIPSLLILIVF 303
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|301102277|ref|XP_002900226.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102378|gb|EEY60430.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 76.2554 bits (186), Expect = 2.931e-11 Identity = 73/248 (29.44%), Postives = 113/248 (45.56%), Query Frame = 0
Query: 95 EDSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALFEAHNC-PSLWT----CAVVRCVPDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAGDV-LSHGEALQS----FFMLLGLSYLVSFLFVLKFAHQ------FSRMALP-YLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNRRRGQLP 325
E+ A S G EMR R+ LLL VA+ R L+ E A E PS A+ +P +LF++ Y L+LLFWAQL G P +F L N LY GF L+ A+++ L G L F L G+ Y S + F +Q F ++ P + RR+ A+ +L +F V +Y + +GTG + S ++ P ++ ++ E +PS +L +++ P
Sbjct: 95 EEEGAAAASTGSEMRHRLFLLLFVASTLRVCSLVTEVATLEKVTAVPSTSVYCRLLALFLWLPSMLFVSMYGLVLLFWAQLCYACWGKAHPWPRRLFFLFNVLLYVGFALLFALSSTSAGLWRGCDLMQGGVYFVGLFGILYY-SIRLIDFFRNQSPDEDFFFDLSSPRQRVLRRITAVCILLCVLFAVKAVYLIGMGTGYMESEESQYRTPVGVHHIAYEFTIHFSTEFVPSALLLFFTRQQKKSTP 341
BLAST of EWM29286.1 vs. NCBI_GenBank
Match: gi|1214677614|gb|OWY98201.1| (hypothetical protein PHMEG_00031087 [Phytophthora megakarya]) HSP 1 Score: 73.559 bits (179), Expect = 2.051e-10 Identity = 74/265 (27.92%), Postives = 114/265 (43.02%), Query Frame = 0
Query: 95 EDSDMATTSAGMEMRRRIQLLLLVANLTRCVCLIVETALFEAHNC-PSLWTCAVVRCV------PDLLFLTTYSLLLLFWAQLGRTARGAPCPRLNLMFSLGNGTLYTGFLLIVAMAAG--------DVLSHGEALQSFFMLLGLSYLV-----------SFLFVLKFA-------------HQFSRMALPYLLRRRVLALSLLCGTVFLVHMIYYLSVGTGLLASWLARSGYPPRPEAYIFDAILYPLQELLPSLAILAVLNRR 320
E+ A S G EMR+R+ LLL VA+ R L+ E A E PS T R + P +LF++ Y L+LLFWAQL G P +F L N LY GF L+ A+++ D++ G F++L S + F F L A + + L+ RR+ A+ +L +F V +Y + +GTG + S ++ P ++ ++ L E +PS A+L R+
Sbjct: 97 EEEGAAAASTGSEMRQRLFLLLFVASTLRVCSLVTEVATLETVAALPS--TSVFCRLLTLFLWLPSMLFVSMYGLVLLFWAQLCYACWGKAHPWPRRVFFLFNVLLYVGFALLFALSSTSAGLWRGCDLVQGGVYFVGLFVILYYSIRLIDFFRNQSPDEDFFFDLSSAAMGNGNGRQGGSTFSIATSSPRQLVLRRITAVCILLCVLFAVKAVYLIGMGTGYMESEESKFRTPVGVHHIAYEFTIHFLTEFIPS-ALLLFFTRQ 358 The following BLAST results are available for this feature:
BLAST of EWM29286.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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