EWM29270.1, cds1393 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29270.1 vs. NCBI_GenBank
Match: gi|585111793|gb|EWM29270.1| (NADH:ubiquinone oxidoreductase, ESSS subunit [Nannochloropsis gaditana]) HSP 1 Score: 308.145 bits (788), Expect = 3.611e-106 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MLFAARSAATSALRRGLGHPQPHFVRHGARRMMGGGGHSPAPHPSQPKQAFLFNEGPGPRKVEMWEPITSTVYWSAFLILVVGLYNAPETRIQEWAAEEAEARLARIEEGKDVEYGHIYHKQLLTGGFVQHSAANADSPPEAEEEEEEEED 151
MLFAARSAATSALRRGLGHPQPHFVRHGARRMMGGGGHSPAPHPSQPKQAFLFNEGPGPRKVEMWEPITSTVYWSAFLILVVGLYNAPETRIQEWAAEEAEARLARIEEGKDVEYGHIYHKQLLTGGFVQHSAANADSPPEAEEEEEEEED
Sbjct: 1 MLFAARSAATSALRRGLGHPQPHFVRHGARRMMGGGGHSPAPHPSQPKQAFLFNEGPGPRKVEMWEPITSTVYWSAFLILVVGLYNAPETRIQEWAAEEAEARLARIEEGKDVEYGHIYHKQLLTGGFVQHSAANADSPPEAEEEEEEEED 151
BLAST of EWM29270.1 vs. NCBI_GenBank
Match: gi|676389127|ref|XP_009037842.1| (hypothetical protein AURANDRAFT_64839 [Aureococcus anophagefferens] >gi|323451328|gb|EGB07205.1| hypothetical protein AURANDRAFT_64839 [Aureococcus anophagefferens]) HSP 1 Score: 73.1738 bits (178), Expect = 2.791e-12 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 0
Query: 52 LFNEGPGPRKVEMWEPITSTVYWSAFLILVVGLYNAPETRIQEWAAEEAEARLARIEEGKDVEYGHIYHKQLLTGGFVQ 130
LF E PG K+E WEPI + Y ++ ++L+VGL+N P T I WA +EA ARL EG+DVEYG Y+ + F +
Sbjct: 811 LFGEKPG-HKMEGWEPIIYSCYGASAVLLIVGLWNKPTTSINAWAKDEANARLKLKREGEDVEYGTHYNSKAAKFAFAK 888
BLAST of EWM29270.1 vs. NCBI_GenBank
Match: gi|923122807|ref|XP_013754873.1| (hypothetical protein AMSG_09160 [Thecamonas trahens ATCC 50062] >gi|906559741|gb|KNC52984.1| hypothetical protein AMSG_09160 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 54.6842 bits (130), Expect = 6.028e-7 Identity = 31/78 (39.74%), Postives = 41/78 (52.56%), Query Frame = 0
Query: 38 HSPAPHP--------SQPKQAFLFNEGPG-PRKVEMWEPITSTVYWSAFLILVVGLYNAPETRIQEWAAEEAEARLAR 106
HS AP S + +LF E PG PRK E+WE + F++ +GL APET I+ WA EE+ AR+ R
Sbjct: 18 HSSAPRRGGATEEIFSDTQNGYLFGEKPGVPRKKELWETMMQIGMGGTFVLAAIGLACAPETSIKVWAEEESVARIKR 95 The following BLAST results are available for this feature:
BLAST of EWM29270.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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