EWM29285.1, cds1390 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|585111808|gb|EWM29285.1| (vamp-like protein ykt62 [Nannochloropsis gaditana]) HSP 1 Score: 414.461 bits (1064), Expect = 1.104e-146 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS Sbjct: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|298715662|emb|CBJ28188.1| (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 295.434 bits (755), Expect = 1.179e-99 Identity = 133/199 (66.83%), Postives = 168/199 (84.42%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199 MK+V+I RY RDT EP++LS V EL S+G+FQR GI+EMC F SKT++KR QPGQRQ++QHE+YNVH ++R DGL GTV ADLEYPPRVAFVLL+ LLE++A ++ W S + E++ +PP+ + I +YQDPAKADKITKI+RDLDETT++LH+TID VLERGV+LDELV+RS+DLS QSK+FYKQARKTNSCC +S Sbjct: 1 MKVVSICTMRYNRDTAEPVMLSQVNELSSYGFFQRQGIKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLEQYAEQVS-WQSEIRHEAIRFPPMDKMIVDYQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 198
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|1210512182|dbj|GAX28755.1| (synaptobrevin homolog YKT6 [Fistulifera solaris]) HSP 1 Score: 270.011 bits (689), Expect = 1.714e-89 Identity = 124/200 (62.00%), Postives = 159/200 (79.50%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITN-WSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199 MK+V +A+ R D EP+ L+ TEL SFG+FQR ++EM F++KT +KR +PGQRQ+++HE Y VHC++R+DGLGGTV D EYP RVAFV+L LL+ FA + W +VT ESVT+PP E +++YQ+PA+ADKITKI++DLDETT ILHKTID+VLERGVKLD LVE+SNDLS+QSKLFYK A+KTNSCC +S Sbjct: 1 MKVVGLAIVRTGSDLNEPVPLTVATELSSFGFFQRQSVKEMLMFLTKTFMKRTEPGQRQSVEHEGYVVHCYVRSDGLGGTVTTDGEYPARVAFVMLGQLLDEFAQKQGDSWKTVTTPESVTFPPADEYLQKYQNPAEADKITKIQKDLDETTQILHKTIDSVLERGVKLDNLVEKSNDLSAQSKLFYKSAKKTNSCCVVS 200
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|1210523153|dbj|GAX18204.1| (synaptobrevin homolog YKT6 [Fistulifera solaris]) HSP 1 Score: 269.626 bits (688), Expect = 2.805e-89 Identity = 124/200 (62.00%), Postives = 159/200 (79.50%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITN-WSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199 MKIV +A+ R D EP+ L+ TEL SFG+FQR ++EM F++KT +KR +PGQRQ+++HE Y VHC++R+DGLGGTV D EYP RVAFV+L LL+ FA + W +VT ESV++PP E +++YQ+PA+ADKITKI++DLDETT ILHKTID+VLERGVKLD LVE+SNDLS+QSKLFYK A+KTNSCC +S Sbjct: 1 MKIVGLAIVRTGSDLNEPVPLTVATELSSFGFFQRQSVKEMLMFLTKTFMKRTEPGQRQSVEHEGYVVHCYVRSDGLGGTVTTDGEYPARVAFVMLGQLLDEFAQKQGDSWKTVTTPESVSFPPADEYLQKYQNPAEADKITKIQKDLDETTQILHKTIDSVLERGVKLDNLVEKSNDLSAQSKLFYKSAKKTNSCCVVS 200
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|1072237632|gb|OEU22359.1| (snare-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 265.774 bits (678), Expect = 7.167e-88 Identity = 125/200 (62.50%), Postives = 157/200 (78.50%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITN-WSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199 MK++A++ R + P+PII EL SFG+FQR I+EM F++KT +KR +PGQRQ+I HE Y VHC++R+DGLGGTVI D EYP RVAFVLLS +L+ F + + W + T ES+T+P L+E + +YQDP+ ADKITKI+ DLDETT ILHKTID+VLERGVKLD LVERSNDLS+QSK+FYKQA+KTNSCC IS Sbjct: 1 MKLLALSTVRTGNELPDPIIACFEAELSSFGFFQRPTIKEMLSFLTKTFMKRTEPGQRQSITHEGYVVHCYIRSDGLGGTVITDEEYPARVAFVLLSQILDEFTTSVGDTWKTCTVHESMTFPALKEYLTKYQDPSAADKITKIQNDLDETTQILHKTIDSVLERGVKLDNLVERSNDLSAQSKMFYKQAKKTNSCCVIS 200
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|219123449|ref|XP_002182037.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406638|gb|EEC46577.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 257.684 bits (657), Expect = 1.239e-84 Identity = 120/200 (60.00%), Postives = 155/200 (77.50%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITN-WSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199 MK+V +A+ R D EPI L+ +L SFG+FQR ++EM F++KT KR +PGQRQ+++HE Y VHC++R DGLGGTV D EYP RVAFVLL LLE F + + W +VT ESV + +E +++YQ+PA+ADK+TKI++DLDETT ILHKTID+VLERGVKLD LV++SNDLS+QSK+FYKQA+KTNSCC IS Sbjct: 1 MKVVGLAVVRTGSDLNEPIPLTVSNDLSSFGFFQRQSVKEMLMFLTKTFTKRTEPGQRQSVEHEGYVVHCYVRADGLGGTVTTDQEYPARVAFVLLGQLLEDFTNEHGDSWKTVTTPESVVFTKAEEYLQKYQNPAEADKVTKIQKDLDETTQILHKTIDSVLERGVKLDSLVDKSNDLSAQSKMFYKQAKKTNSCCVIS 200
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|635371194|emb|CCI40594.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 248.44 bits (633), Expect = 5.351e-81 Identity = 117/199 (58.79%), Postives = 151/199 (75.88%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDIT-NWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSI 198 MKIVAI L R +D +P+IL++ EL SFGYFQR+G+REM F S+T IKR Q GQRQ+IQHEEY H +++ DGL G V+ D EYPPRVAF LL+ L+E + ++ +W S T +PPL +A+ +YQDP+KADKI+ I+++LDETT IL KTID VLERG KLD+LV +S DLS+QSK+FYKQA+KTNSCC + Sbjct: 1 MKIVAIELLRQDKDGQDPLILAAAYELSSFGYFQRSGVREMINFFSRTFIKRSQAGQRQSIQHEEYTCHVYVKADGLSGIVVTDQEYPPRVAFALLNKLMESYHTELNGSWKSHTGNPK-DWPPLGKAVTDYQDPSKADKISAIQKELDETTAILSKTIDNVLERGEKLDDLVNKSQDLSNQSKVFYKQAKKTNSCCVV 198
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|695457282|ref|XP_009537159.1| (hypothetical protein PHYSODRAFT_356041 [Phytophthora sojae] >gi|348667768|gb|EGZ07593.1| hypothetical protein PHYSODRAFT_356041 [Phytophthora sojae]) HSP 1 Score: 243.817 bits (621), Expect = 2.933e-79 Identity = 120/199 (60.30%), Postives = 148/199 (74.37%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVT-YPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSI 198 MKIVAI L R +P ILS+ E+ SFGYFQR+G+REM F S+T +KR +PGQRQ+IQHEEYN H ++R DGL G V+ D EYPPRVAF LL+ L++ F D TN TQ S + PL A+ EYQDP+KADKI+ I+++LDETT +L KTID VLERG KLD+LV +S DLSSQSK+FYKQA+KTNSCC + Sbjct: 1 MKIVAIELLRQDGQGQDPTILSAGFEVSSFGYFQRSGVREMINFFSRTFVKRTEPGQRQSIQHEEYNCHVYVRRDGLAGIVVCDQEYPPRVAFALLNKLMDEF--DKTNSGWKTQSGSPQEFAPLTTALAEYQDPSKADKISAIQKELDETTAVLSKTIDNVLERGEKLDDLVSKSQDLSSQSKVFYKQAKKTNSCCVV 197
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|1214710693|gb|OWZ21759.1| (Synaptobrevin [Phytophthora megakarya]) HSP 1 Score: 240.35 bits (612), Expect = 9.409e-78 Identity = 114/198 (57.58%), Postives = 143/198 (72.22%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSI 198 MKIVAI L R +P+ILS+ E+ SFGYFQR+G+REM F S+T IKR +PGQRQ+IQHEEYN H ++R DGL G V+ D EYPPRVAF LL+ L++ + + PL A+ EYQDP+KADKI+ I+++LDETT +L KTID VLERG KLD+LV +S DLSSQSK+FYKQA+KTNSCC + Sbjct: 1 MKIVAIELLRQDGQGQDPMILSAGFEVSSFGYFQRSGVREMINFFSRTFIKRTEPGQRQSIQHEEYNCHVYVRRDGLAGIVVCDQEYPPRVAFALLNKLMDEYDKSTGGSWKTQSGNPQEFAPLTTALAEYQDPSKADKISAIQKELDETTAVLSKTIDNVLERGEKLDDLVSKSQDLSSQSKVFYKQAKKTNSCCVV 198
BLAST of EWM29285.1 vs. NCBI_GenBank
Match: gi|301110090|ref|XP_002904125.1| (synaptobrevin-like protein [Phytophthora infestans T30-4] >gi|262096251|gb|EEY54303.1| synaptobrevin-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 239.195 bits (609), Expect = 2.023e-77 Identity = 119/201 (59.20%), Postives = 147/201 (73.13%), Query Frame = 0 Query: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDI-TNWS--SVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSI 198 MKIVAI L R +PIILS+ E+ SFGYFQR+G+REM F S+T IKR +PGQRQ+IQHEEYN H ++R DGL G V+ D EYPPRVAF LL+ L++ + NW S QE + L A+ EYQDP+KADKI+ I+++LDETT +L KTID VLERG KLD+LV +S DLSSQSK+FYKQA+KTNSCC + Sbjct: 1 MKIVAIELLRQDGQGQDPIILSASFEVSSFGYFQRSGVREMINFFSRTFIKRTEPGQRQSIQHEEYNCHVYVRRDGLSGIVVCDQEYPPRVAFALLNKLMDEYDKSTGGNWKTQSGNPQE---FAALTTALAEYQDPSKADKISAIQKELDETTAVLSKTIDNVLERGEKLDDLVSKSQDLSSQSKVFYKQAKKTNSCCVV 198 The following BLAST results are available for this feature:
BLAST of EWM29285.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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