EWM29307.1, cds1366 (CDS) Nannochloropsis gaditana

Overview
NameEWM29307.1
Unique Namecds1366
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:455857..455960 -
Alignment locationCM002457.1:455645..455801 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29307.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100152g7.725.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:455857..455960 -
CM002457.1supercontigCM002457.1:455645..455801 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29307.1 vs. NCBI_GenBank
Match: gi|585111831|gb|EWM29307.1| (hypothetical protein Naga_100152g7 [Nannochloropsis gaditana])

HSP 1 Score: 176.792 bits (447), Expect = 3.756e-56
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 
Query:    1 MPSSENVSEPIVVLVTWKRIRTLAAFLEENRFLKIRHLMKRNNPKFQVFTNDKCFSSPYKVFNRYSPVSPKDFAAHRLKLLSRMAS 86
            MPSSENVSEPIVVLVTWKRIRTLAAFLEENRFLKIRHLMKRNNPKFQVFTNDKCFSSPYKVFNRYSPVSPKDFAAHRLKLLSRMAS
Sbjct:    1 MPSSENVSEPIVVLVTWKRIRTLAAFLEENRFLKIRHLMKRNNPKFQVFTNDKCFSSPYKVFNRYSPVSPKDFAAHRLKLLSRMAS 86
The following BLAST results are available for this feature:
BLAST of EWM29307.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111831|gb|EWM29307.1|3.756e-56100.00hypothetical protein Naga_100152g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1368rna1368Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications