EWM30492.1, cds136 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|585113156|gb|EWM30492.1| (hypothetical protein Naga_100013g87 [Nannochloropsis gaditana]) HSP 1 Score: 993.03 bits (2566), Expect = 0.000e+0 Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 0
Query: 1 MWPIYHLPSFQQEIRSKKRKDTRARPNMEIVSLLTFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNSECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNASNKSDK 475
MWPIYHLPSFQQEIRSKKRKDTRARPNMEIVSLLTFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNSECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNASNKSDK
Sbjct: 1 MWPIYHLPSFQQEIRSKKRKDTRARPNMEIVSLLTFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNSECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNASNKSDK 475
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|553189959|ref|XP_005855109.1| (prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526] >gi|422293952|gb|EKU21252.1| prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 965.296 bits (2494), Expect = 0.000e+0 Identity = 463/465 (99.57%), Postives = 465/465 (100.00%), Query Frame = 0
Query: 11 QQEIRSKKRKDTRARPNMEIVSLLTFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNSECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNASNKSDK 475
QQEIRSKKRKDTRARPNMEIVSLLTFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSN+ECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFI+MAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNASNKSDK
Sbjct: 1 QQEIRSKKRKDTRARPNMEIVSLLTFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNNECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFIDMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNASNKSDK 465
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|585101001|gb|EWM21003.1| (hypothetical protein Naga_100081g21 [Nannochloropsis gaditana]) HSP 1 Score: 236.498 bits (602), Expect = 5.677e-69 Identity = 150/454 (33.04%), Postives = 219/454 (48.24%), Query Frame = 0
Query: 35 TFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDG-AGVLQKNTLFSFSNSECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGD--IFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGK--------------------------GDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHF 459
T +V+ L P AVN+F L+ ++ LG+ GV +K+ L FS+S C + +GFP + L G E ++++ EL +N+S C + G + + I D+ L + + L + + NDL V + WE S ++ + G+ +F F+ + R R + L LS L + G T+ +QL E ++WRGR N R+ +NE+QP T +YT GFKK +P ++ LL H + + EPW K D H NF+E +T+VY + +F + P L W GG KL PTS YGIR Y+NGS LR+HVD G THI+SAI+NV QDV+E W L+ +DH RHF+ + PG+ YESA+ LHGR L+G+ F N F HF
Sbjct: 7 TRWAVMLLLPLALQAVNHFKDLNRLEDLELLGLVQKDTGVAEKHLLLGFSSSACEQSVRGLGFPSEYSVL-GEHVETGEVMLDR-NTELPGVYNISSCNEYVYVPRGGRTREDYDVIKAVDKLQLHNWLFTHLAL-TMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRY--HSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHF 455
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|1210523863|dbj|GAX17187.1| (hypothetical protein FisN_10Lh035 [Fistulifera solaris]) HSP 1 Score: 145.976 bits (367), Expect = 2.295e-35 Identity = 78/205 (38.05%), Postives = 117/205 (57.07%), Query Frame = 0
Query: 266 RGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYT-DRDMR-------DIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSA-ILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAP 461
+ T + RL N QP + YTG GF K+ P + ++++ +++ +E W K +++N++E T +V DR+++ + ++ K +E+W E + PTS YGIR Y G+IL HVD R +VS+ I+NV QDVDE WPL + D QG + M PG+M LYES + LHGR L+GRY+ N+F HF P
Sbjct: 64 KACDQTEMDRLEMNARQPKAMVNYTGTGFTKIKAPQTVMDLIIQHWEANKETMTEESWPKGSIYLNYWESKTYMVAVEDRNLKGAGDKLKEQIWDAAKTTIEAWTNVE-IQPTSMYGIRVYTEGAILSPHVD--RLPLVSSCIINVAQDVDEPWPLEVYDRQGNAVNVTMEPGDMVLYESGSTLHGRPFPLKGRYYANIFIHFEP 265
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|569388815|gb|ETO17423.1| (hypothetical protein RFI_19899 [Reticulomyxa filosa]) HSP 1 Score: 140.584 bits (353), Expect = 8.932e-35 Identity = 80/239 (33.47%), Postives = 121/239 (50.63%), Query Frame = 0
Query: 241 ILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLL------------EYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRD---IVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQ-DVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAA 463
+++Q G+ + Q D+ R R +T V +N + P + + GFKK+ MP LH RL+ + + DQR+ E W + +N+++ + I+ D + I +KPIL W GGE+L T+ YGIR Y ++LR+HVD TH+ SAIL + Q DV W L ++ G+R+ + + PGEM LYE T +HGR L G + N F HF P +
Sbjct: 1 MVTQLENGQWGFDVGQRQRVTEDLVRRRHSTTVMTHVRNLIFPIIIPHHDPLGFKKIKMPKGLHRRLMVCVFFCFLFLFYNFYRNYYDQRVAENWEDEGTQLNYFDVKSHIISLDNQWEERDAIANDVVKPILAEWSGGEELEFTAFYGIREYARNALLRNHVDRSETHVFSAILQISQTDVQSPWELEVIGFDGKRYLVELEPGEMVLYEGHTLIHGRPHPLNGTLYSNAFCHFKPKS 239
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|1210519687|dbj|GAX21456.1| (hypothetical protein FisN_10Hh035 [Fistulifera solaris]) HSP 1 Score: 142.895 bits (359), Expect = 3.385e-34 Identity = 77/205 (37.56%), Postives = 116/205 (56.59%), Query Frame = 0
Query: 266 RGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYT-DRDMR-------DIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSA-ILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAP 461
+ T + RL N QP + YT GF K+ P + ++++ +++ +E W K +++N++E T +V DR+++ + ++ K +E+W E + PTS YGIR Y G+IL HVD R +VS+ I+NV QDVDE WPL + D QG + M PG+M LYES + LHGR L+GRY+ N+F HF P
Sbjct: 64 KACDQTEMDRLEMNARQPKAMVNYTDTGFTKIKAPQKVMDLIIQHWEANKETMTEESWPKGSIYLNYWESKTYMVAVEDRNLKGAGDKLKEQIWDAAKTTIEAWTNVE-IQPTSMYGIRVYTEGAILSPHVD--RLPLVSSCIINVAQDVDEPWPLEVYDRQGNAVNVTMEPGDMVLYESGSTLHGRPFPLKGRYYANIFIHFEP 265
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|569415657|gb|ETO26451.1| (hypothetical protein RFI_10685 [Reticulomyxa filosa]) HSP 1 Score: 143.665 bits (361), Expect = 8.095e-34 Identity = 80/209 (38.28%), Postives = 112/209 (53.59%), Query Frame = 0
Query: 266 RGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLE-------YLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDR--DMRD-IVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQ-DVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAA 463
R R T V +N + P + + GFKK+ MP LH RL+ + + D R+ E W + +N+++ + ++ D + RD I ++PIL W GG +L T+ YGIR Y ++LR+HVD TH+ SAIL V Q D+D WPL I+ G+R+ IN+ PGEM LYES +HGR G F N F HF P A
Sbjct: 295 RRRHATTVMTHVRNLVFPIVLPHHDPLGFKKIKMPKGLHQRLMARTLFACTFYRDYYDTRIAESWEDEGTQLNYFDVKSHMISLDNRWEERDAIANDVVRPILADWSGGSELEFTAFYGIREYSRNALLRNHVDRTETHVYSAILQVAQTDIDSPWPLEIIGFDGKRYLINLKPGEMVLYESHALIHGRPHPFNGTLFSNAFCHFKPTA 503
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|676381311|ref|XP_009033934.1| (hypothetical protein AURANDRAFT_70898 [Aureococcus anophagefferens] >gi|323455714|gb|EGB11582.1| hypothetical protein AURANDRAFT_70898 [Aureococcus anophagefferens]) HSP 1 Score: 142.895 bits (359), Expect = 1.517e-32 Identity = 86/206 (41.75%), Postives = 104/206 (50.49%), Query Frame = 0
Query: 263 DVWRGRQN-----TNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGE--KLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAP 461
D+W N T R N QP TV +T GF +P +H LL AR D +R V + ILE+W+G + L+PTS YGIRRY NGS L+ HVD+ TH VSAILNV QDVDE WPL I DH G H + M PGEM LYES+ ++HGR L G +DN+F HF P
Sbjct: 1659 DLWAEEMNGHDRDTFANNARINRDQPPTVPAFTDVGFAVRPIPRDVHAALLA--AR-----------------------------DDKVRTQVNDACRAILEAWIGPKWGGLVPTSVYGIRRYTNGSTLQAHVDVVATHAVSAILNVDQDVDEDWPLQIRDHGGDVHAVVMKPGEMVLYESSKSIHGRLVPLNGASYDNIFVHFRP 1833
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|1072235942|gb|OEU20670.1| (hypothetical protein FRACYDRAFT_180822 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 137.117 bits (344), Expect = 4.814e-32 Identity = 81/199 (40.70%), Postives = 110/199 (55.28%), Query Frame = 0
Query: 274 ARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDI--VFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIV-SAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNA 469
+RL+ N QP +V YT G+ K +PS L + E+ ++ E W ++ N + T+V ++D I + + +KPILE W G + L P STYGIR Y+NGSIL HVD R +V S I+ V QDVDE WPL + H + I M PG+M LYES + +HGR + G +F N F HF P AP A
Sbjct: 95 SRLKMNANQPKSVFNYTKDGYTKTRVPSDLFDLIKEFFNKNRHLAKIE-WQSHTVYHNAWIAPPTMVGLNKDKTLINQIQEQIKPILEEWTG-QHLSPVSTYGIRMYHNGSILAPHVD--RMPLVASVIIQVDQDVDEPWPLEVYGHDDKATNITMEPGDMVLYESHSVIHGRPFPMIGNFFANCFIHFEPYAPLEGEA 289
BLAST of EWM30492.1 vs. NCBI_GenBank
Match: gi|1210519688|dbj|GAX21457.1| (hypothetical protein FisN_10Hh036 [Fistulifera solaris]) HSP 1 Score: 135.961 bits (341), Expect = 9.210e-32 Identity = 74/202 (36.63%), Postives = 109/202 (53.96%), Query Frame = 0
Query: 271 TNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTD--------RDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSA-ILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAA 463
T R+ N QP ++ YT GF K+ P + L + ++ +E W ++VN++E T +V + +++ ++ K +E W G E L PTS YGIR Y +G++L H D R +VS+ I+NV QDVDE WPL + D QG + M PG+M LYES + +HGR L+GR+F N+F HF P
Sbjct: 68 TEADRIDMNNRQPQSMVNYTSTGFMKIRAPKEVMALLTRHWETNKVNMKEEQWPVGSIYVNYWESKTYMVSVEDTKLRGAGATLKEKIWDAAKSTIEQWTGME-LKPTSMYGIRMYTDGAVLSPHAD--RLPLVSSCIINVDQDVDEPWPLEVYDRQGNAVNVTMEPGDMVLYESGSLIHGRPFPLKGRFFANIFIHFEPTG 266 The following BLAST results are available for this feature:
BLAST of EWM30492.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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