EWM29314.1, cds1342 (CDS) Nannochloropsis gaditana

Overview
NameEWM29314.1
Unique Namecds1342
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:398884..400131 +

Link to JBrowse

Properties
Property NameValue
Start range398884
Start range.
Protein idEWM29314.1
Productu3 small nucleolar ribonucleoprotein mpp10
Partialtrue
Orig transcript idgnl|cribi|Naga_100136g1.3165.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:398884..400131 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
GO:0034457Mpp10 complex
GO:0005732small nucleolar ribonucleoprotein complex
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR012173snoRNP_Mpp10
Homology
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|585111840|gb|EWM29314.1| (u3 small nucleolar ribonucleoprotein mpp10, partial [Nannochloropsis gaditana])

HSP 1 Score: 803.512 bits (2074), Expect = 0.000e+0
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0
Query:    1 FFGDRDEAEGEKGEEEEDEEEEEEEEEEEEEEGVEEEEEGNDLERLDGMGREKGKEREGGDSRSGARRRQEGEEEVAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGREGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEVSKHGGAYAKQRSTGLESEKKKFKGGNALKL 415
            FFGDRDEAEGEKGEEEEDEEEEEEEEEEEEEEGVEEEEEGNDLERLDGMGREKGKEREGGDSRSGARRRQEGEEEVAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGREGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEVSKHGGAYAKQRSTGLESEKKKFKGGNALKL
Sbjct:    1 FFGDRDEAEGEKGEEEEDEEEEEEEEEEEEEEGVEEEEEGNDLERLDGMGREKGKEREGGDSRSGARRRQEGEEEVAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGREGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEVSKHGGAYAKQRSTGLESEKKKFKGGNALKL 415          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|695384519|ref|XP_009518026.1| (hypothetical protein PHYSODRAFT_476379 [Phytophthora sojae] >gi|348690937|gb|EGZ30751.1| hypothetical protein PHYSODRAFT_476379 [Phytophthora sojae])

HSP 1 Score: 276.174 bits (705), Expect = 1.487e-86
Identity = 149/314 (47.45%), Postives = 216/314 (68.79%), Query Frame = 0
Query:   73 EEEVAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGR-EGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEV 385
            EE++A+ G+++S Q+++   +KEI ELE+E +SE+PW L+GEV++  RPENSLLEAV+D +   +   ++T E S +LEEMIK R+ E  +DDV+ +  G     N +  K +L EVS EK+ EGLGE+YEKEY++ AMG E + +  +++ E+  +F+ L  KLDALSN++FTPK A  E+ V+  VPAIAMEEV+P++V   +  APEEV+ KKR R E V++   EM Q +R+ LR  KK ARRK +RQ+  ++RLV +LNPGLGNKY K+K+   I  +  +  G +  GS K  +S S +FF+ LQ+EV
Sbjct:   26 EEDLAERGIMSSHQRQRLRLQKEIKELEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDFDDVIRKFAG-----NEQDEKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYDKKRKRGEAVLQSKEEMTQSERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSKQ-FSNSKEFFSRLQDEV 333          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|298709701|emb|CBJ31506.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 279.256 bits (713), Expect = 1.748e-84
Identity = 158/322 (49.07%), Postives = 205/322 (63.66%), Query Frame = 0
Query:   80 GLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQAL-GEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGREGVVRE-SAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEVSKHGGAYAKQRSTG 399
            G+L++  +  R  + +I++ ERELL+E+PW LRGEV + +RP+NSLLEA VDVE A R     T E + +L +MIK R  +  WDDV P+ L G  V       ++E P +SQ+K+ EGLGE+YEKE+L+  MG   +  +   K EL  LF KL  KLDAL NF++TPKAA  E+ VQ++V AIAMEEVLP +V     LAPEE++ KKRGRE    E  AEM Q DR+R R  KKA RRKARRQ  A  +LV +LNPGLGNKY K K+  +I+ +  V   T    S    +STS KFF+ LQE V+      A  +STG
Sbjct:  286 GVLSAHVQHSRRMKSKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAEHAMTLLDMIKKRCLDSNWDDVTPRDLQGPTV-------RKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVT------ASVKSTG 594          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|301119563|ref|XP_002907509.1| (U3 small nucleolar ribonucleoprotein, putative [Phytophthora infestans T30-4] >gi|262106021|gb|EEY64073.1| U3 small nucleolar ribonucleoprotein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 269.24 bits (687), Expect = 7.046e-84
Identity = 146/311 (46.95%), Postives = 210/311 (67.52%), Query Frame = 0
Query:   76 VAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGR-EGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEV 385
            +A+ G+++S Q+++   +KEI +LE+E +SE+PW L+GEV++  RPENSLLEAV+D +   +   ++T E S +LEEMIK R+ E  +DDV+ +  G     N    K +L EVS EK+ EGLGE+YEKEY++ AMG E + +  +++ E+  +F+ L  KLDALSN++FTPK A  E+ V+  VPAIAMEEV+P++V   +  APEEV+ KKR R E V++   EM Q +R+ LR  KK ARRK  RQ+  ++RLV +LNPGLGNKY K+K+   I  +  +  G +  GS K  +S S +FF  LQ+EV
Sbjct:   30 LAERGIMSSHQRQRHRLQKEIKDLEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDYDDVIRKFAG-----NEEDKKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELHVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKENRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSK-QFSNSKEFFTRLQDEV 334          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|570938906|gb|ETP04163.1| (hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 271.937 bits (694), Expect = 1.136e-82
Identity = 146/311 (46.95%), Postives = 212/311 (68.17%), Query Frame = 0
Query:   76 VAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGR-EGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEV 385
            +A+ G+++S Q++++  +KEI +LE+E +SE+PW L+GEV++  RPENSLLEAV+D +   +   ++T E S +LEEMIK R+ E  +DDV+ +  G     N    K +L EVS EK+ EGLGE+YEKEY++ AMG E + +  +++ E+  +F+ L  KLDALSN++FTPK A  E+ V+  VPAIAMEEV+P++V   +  APEEV+ KKR R E V++   EM Q +R+ LR  KK ARRK +RQ+  ++RLV +LNPGLGNKY K+K+   I  +  +  G +  GS K  +S S +FF  LQ+EV
Sbjct:  202 LAERGIMSSHQRQRQRLQKEIKDLEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDYDDVIRKFAG-----NEEDQKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSK-QFSNSKEFFTRLQDEV 506          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|567977497|gb|ETL27999.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|570969121|gb|ETP32240.1| hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 271.937 bits (694), Expect = 1.136e-82
Identity = 146/311 (46.95%), Postives = 212/311 (68.17%), Query Frame = 0
Query:   76 VAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGR-EGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEV 385
            +A+ G+++S Q++++  +KEI +LE+E +SE+PW L+GEV++  RPENSLLEAV+D +   +   ++T E S +LEEMIK R+ E  +DDV+ +  G     N    K +L EVS EK+ EGLGE+YEKEY++ AMG E + +  +++ E+  +F+ L  KLDALSN++FTPK A  E+ V+  VPAIAMEEV+P++V   +  APEEV+ KKR R E V++   EM Q +R+ LR  KK ARRK +RQ+  ++RLV +LNPGLGNKY K+K+   I  +  +  G +  GS K  +S S +FF  LQ+EV
Sbjct:  202 LAERGIMSSHQRQRQRLQKEIKDLEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDYDDVIRKFAG-----NEEDQKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSK-QFSNSKEFFTRLQDEV 506          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|953494078|emb|CEG43672.1| (u3 small nucleolar [Plasmopara halstedii])

HSP 1 Score: 273.863 bits (699), Expect = 1.320e-82
Identity = 148/314 (47.13%), Postives = 212/314 (67.52%), Query Frame = 0
Query:   73 EEEVAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGR-EGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEV 385
            +EE+A+ G+L+S Q++++   KEI ELE+E +SE+PW L+GEV++  RPENSLLEAV+D +   +   ++T E S +LEEMIK R+ E  ++DV+ +  G     N    K  L +VS EK+ EGLGE+YEKEY++ AMG E + +  +++ E+  +F+ L  KLDALSN+ FTPK A  E+ V+  VPAIAMEE++P++V   +  APEEV+ KKR R E V++   EM Q +R+ LR  KK ARRK +RQ+  ++RLV +LNPGLGNKYAK+K+   I  +  +  G +  GS K  +S S  FF  LQ+EV
Sbjct:  284 DEELAERGILSSHQRQRKRLEKEIQELEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEEDYNDVIRKFAG-----NEEDRKNALEDVSMEKSKEGLGEIYEKEYMKTAMGFEPDDESKQDQEEIEVMFKSLCWKLDALSNYYFTPKPAVKELQVKPAVPAIAMEEIVPISVSDANLKAPEEVYAKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYAKKKMLESIAGAKNITTGKQIEGSSK-QFSNSKDFFTRLQDEV 591          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|568006998|gb|ETL81243.1| (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 271.552 bits (693), Expect = 1.334e-82
Identity = 146/311 (46.95%), Postives = 212/311 (68.17%), Query Frame = 0
Query:   76 VAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGR-EGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEV 385
            +A+ G+++S Q++++  +KEI +LE+E +SE+PW L+GEV++  RPENSLLEAV+D +   +   ++T E S +LEEMIK R+ E  +DDV+ +  G     N    K +L EVS EK+ EGLGE+YEKEY++ AMG E + +  +++ E+  +F+ L  KLDALSN++FTPK A  E+ V+  VPAIAMEEV+P++V   +  APEEV+ KKR R E V++   EM Q +R+ LR  KK ARRK +RQ+  ++RLV +LNPGLGNKY K+K+   I  +  +  G +  GS K  +S S +FF  LQ+EV
Sbjct:  202 LAERGIMSSHQRQRQRLQKEIKDLEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDYDDVIRKFAG-----NEEDQKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSK-QFSNSKEFFTRLQDEV 506          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|1072224840|gb|OEU09589.1| (hypothetical protein FRACYDRAFT_271394 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 266.544 bits (680), Expect = 1.483e-82
Identity = 150/321 (46.73%), Postives = 206/321 (64.17%), Query Frame = 0
Query:   84 SFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMG-----QEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQS-NVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGREGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLG--NKYAKEKLQSEI---RSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEV--SKHGGA 391
            +  KE+   R++  ELE+EL++E+PW+++GE K+T RP NSLLE   + E+A +   ++TVE +  LE+ IK R+    WDDVVP+ L +     +RG   E PEVSQEK+  GLGE+YE+EYL+ A+G      E +T+E K K E+  LF  L +KLDALSN++F P+    E   +   VPAIAMEEVLP+ V     +APEEV+  KRGR+G++R   EMDQ DR+R R  KK ARRKAR++K A+++L+ RL PGLG  N Y K K Q E+   R+ GKV +G +D    K  + +SG FF  LQ E   + HG A
Sbjct:   21 NLTKEEEKLRRQTDELEKELINEKPWQMKGESKSTSRPTNSLLEGTPEFEMASKQAPIITVEHTIDLEDAIKKRIIAEDWDDVVPRELPDIGWNKKRG---EAPEVSQEKSKLGLGELYEREYLKKAVGYDKDADEKKTEEDKAKDEMKQLFANLCSKLDALSNYHFAPRPIADEAEARPMTVPAIAMEEVLPLHVSDARGIAPEEVYAPKRGRDGILRADDEMDQTDRKRQRNSKKTARRKARKEKEADNKLISRLQPGLGLNNPYEKRKAQEELSLARARGKVTMGERDMTDTK--FGSSGTFFKRLQAEAQETVHGHA 336          
BLAST of EWM29314.1 vs. NCBI_GenBank
Match: gi|675176439|ref|XP_008897104.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568036839|gb|ETM34440.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568102883|gb|ETN17554.1| hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 270.781 bits (691), Expect = 2.674e-82
Identity = 146/311 (46.95%), Postives = 212/311 (68.17%), Query Frame = 0
Query:   76 VAQEGLLTSFQKEQRARRKEIAELERELLSERPWELRGEVKATERPENSLLEAVVDVELARRPEVLMTVERSQSLEEMIKARVAEGRWDDVVPQALGEEVMMNRRGHKEELPEVSQEKAGEGLGEVYEKEYLRLAMGQEGETKESKEKAELAALFRKLSAKLDALSNFNFTPKAAHVEVSVQSNVPAIAMEEVLPMAVGQGSTLAPEEVHGKKRGR-EGVVRESAEMDQGDRRRLRRGKKAARRKARRQKTAEDRLVHRLNPGLGNKYAKEKLQSEIRSSGKVVLGTKDSGSQKGAYSTSGKFFAGLQEEV 385
            +A+ G+++S Q++++  +KEI +LE+E +SE+PW L+GEV++  RPENSLLEAV+D +   +   ++T E S +LEEMIK R+ E  +DDV+ +  G     N    K +L EVS EK+ EGLGE+YEKEY++ AMG E + +  +++ E+  +F+ L  KLDALSN++FTPK A  E+ V+  VPAIAMEEV+P++V   +  APEEV+ KKR R E V++   EM Q +R+ LR  KK ARRK +RQ+  ++RLV +LNPGLGNKY K+K+   I  +  +  G +  GS K  +S S +FF  LQ+EV
Sbjct:  202 LAERGIMSSHQRQRQRLQKEIKDLEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDYDDVIRKFAG-----NEEDQKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSK-QFSNSKEFFTRLQDEV 506          
The following BLAST results are available for this feature:
BLAST of EWM29314.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111840|gb|EWM29314.1|0.000e+0100.00u3 small nucleolar ribonucleoprotein mpp10, partia... [more]
gi|695384519|ref|XP_009518026.1|1.487e-8647.45hypothetical protein PHYSODRAFT_476379 [Phytophtho... [more]
gi|298709701|emb|CBJ31506.1|1.748e-8449.07conserved unknown protein [Ectocarpus siliculosus][more]
gi|301119563|ref|XP_002907509.1|7.046e-8446.95U3 small nucleolar ribonucleoprotein, putative [Ph... [more]
gi|570938906|gb|ETP04163.1|1.136e-8246.95hypothetical protein, variant [Phytophthora parasi... [more]
gi|567977497|gb|ETL27999.1|1.136e-8246.95hypothetical protein, variant [Phytophthora parasi... [more]
gi|953494078|emb|CEG43672.1|1.320e-8247.13u3 small nucleolar [Plasmopara halstedii][more]
gi|568006998|gb|ETL81243.1|1.334e-8246.95hypothetical protein, variant [Phytophthora parasi... [more]
gi|1072224840|gb|OEU09589.1|1.483e-8246.73hypothetical protein FRACYDRAFT_271394 [Fragilario... [more]
gi|675176439|ref|XP_008897104.1|2.674e-8246.95hypothetical protein, variant [Phytophthora parasi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1344rna1344Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications