EWM29334.1, cds1340 (CDS) Nannochloropsis gaditana

Overview
NameEWM29334.1
Unique Namecds1340
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:397524..397584 -
Alignment locationCM002457.1:395627..397323 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29334.1
Productu4 tri-snrnp-associated protein 2
Orig transcript idgnl|cribi|Naga_100205g2.2986.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:397524..397584 -
CM002457.1supercontigCM002457.1:395627..397323 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006464cellular protein modification process
GO:0016043cellular component organization
GO:0009056catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR028889USP_dom
IPR001394Peptidase_C19_UCH
IPR013083Znf_RING/FYVE/PHD
IPR001607Znf_UBP
Homology
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|585111861|gb|EWM29334.1| (u4 tri-snrnp-associated protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 1214.52 bits (3141), Expect = 0.000e+0
Identity = 585/585 (100.00%), Postives = 585/585 (100.00%), Query Frame = 0
Query:    1 MKRAREPEDNNGTVHGSRDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKGVERARGCGRGH 585
            MKRAREPEDNNGTVHGSRDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKGVERARGCGRGH
Sbjct:    1 MKRAREPEDNNGTVHGSRDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKGVERARGCGRGH 585          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|612134635|dbj|BAO65810.1| (ubiquitin specific peptidase 39 [Ciliophrys infusionum])

HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 301/551 (54.63%), Postives = 393/551 (71.32%), Query Frame = 0
Query:   32 SLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQE-----EKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDY--FLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATP--PGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKK 573
            S+R KCPYLDT+NR  LDFDFEK+CSVSLSN+N+Y CLVCGKFFQGRG  THA+THS+H  HHVF+NLHT +IFCLPDNYEV+D SLDDI RAL P+FTP     L+ NTTL RD+ GV+YLPGF+GLNNLK TDYVNVV+ AL HVTPLR++FL+   YE  +K+QLV RFGE+MRK+WS+ N+KS VSPH+ +QEV  AS +RF IGK  E V+FLSWLL+ LH GLGGT            +K K    S++ + FQG++RV   T+ RK   V  + EE    ++      GA+      + E E   +W+   + +PFL L+++IP TPLFKDSQGG IIP +PL+ VL+K+NG K  D +KAG   RK+Y +  LP ++I  L+R T+N+F++EKNPTIV FPVKNLELR+Y  F+ +   P++E L+ M++GELK   +AH        VE+ +L E  +  + +   TKYDL+AN+VHDSPPGQ+K      + +P   G+YRVH+ N+A+DQWYEIQDLHV ET+PQL+ +SES +LIYE++
Sbjct:   86 SIRHKCPYLDTINRHVLDFDFEKVCSVSLSNLNVYCCLVCGKFFQGRGKNTHAYTHSVHVSHHVFINLHTRKIFCLPDNYEVVDFSLDDIVRALNPTFTPQETRLLNYNTTLARDIFGVTYLPGFIGLNNLKKTDYVNVVVHALAHVTPLRDFFLRSQNYE-NSKSQLVHRFGELMRKIWSKHNYKSCVSPHELVQEVTVASKRRFVIGKQSECVEFLSWLLNSLHFGLGGT------------RKDK----SIIHEVFQGKVRV--TTRQRKTAAVKQKEEELKMLENQDAEEAGAENWMEDDDDEEEGMEDWSKDVSVAPFLMLSLEIPPTPLFKDSQGGNIIPQVPLFQVLEKYNGKKYTDILKAGYQQRKRYSLLELPPFIIFHLSRFTKNNFYMEKNPTIVTFPVKNLELREYLKFVDDVSFPSDEELQEMSIGELKAICKAHRVHPGN-VVEKAELAEFVKTQVLDQIITKYDLLANIVHDSPPGQKKD----NQMSPLEAGSYRVHLQNKATDQWYEIQDLHVDETMPQLVGLSESYMLIYERQ 612          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|698799066|ref|XP_009832562.1| (hypothetical protein H257_08404 [Aphanomyces astaci] >gi|574112733|gb|ETV78225.1| hypothetical protein H257_08404 [Aphanomyces astaci])

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 288/560 (51.43%), Postives = 361/560 (64.46%), Query Frame = 0
Query:   18 RDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAG---AKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARG-EATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKK 573
            R   +T + A +A S R KCPYLDT+    LDFDFEK+CS+SLS+ N Y CLVCGK+FQGRGP THA THS+  FHHVF+NL T +I+CLPDNYEV D SL  IK AL PSFTP   A LDTN TL +D  GVSYLPGF+GLNNLK TDY++VVLQAL HVTPLR+YFLQP  Y A     ++ LVLRFGE++RKLWS  N K+T+SPH+ +Q +   S KRF IG+  +A++FLSW L++LH GLGGT               +    SV+   FQG + V TL          G    +GD                       A   T  PFL+LT+D+P TPLFKDSQGG +IP +PL++VL+KF+G K+   +       KQY I  LP YLI  + R T+N+FF EKNPTIVNFPVKNLEL++Y    + +PT   +  MT  ELK  + +H GG +   V++ DL       + + + TKY+L+AN+ HDSP    K+  A   +    GTYRVHV NR++DQWYE+QDLHVQET+PQLI ISES VLIYE+K
Sbjct:    3 RKDVTTDAAAQQALSKRKKCPYLDTIRPQLLDFDFEKVCSISLSDQNAYACLVCGKYFQGRGPNTHAFTHSVQSFHHVFINLSTDKIYCLPDNYEVTDLSLAPIKNALRPSFTPEYTASLDTNRTLAQDSFGVSYLPGFIGLNNLKKTDYISVVLQALAHVTPLRDYFLQPDNYAAAVAKTRSPLVLRFGELIRKLWSPHNIKNTISPHEIVQAISVVSKKRFHIGRQSDALEFLSWFLNELHRGLGGT---------------RTPGSSVIHKVFQGMVHVTTLPAP-------GAATHDGDA----------------------AAVPTAVPFLYLTLDLPPTPLFKDSQGGNVIPQVPLFTVLEKFDGDKITHVLHGATRQHKQYSIDSLPPYLIFHIHRFTKNNFFTEKNPTIVNFPVKNLELKEYV--ASRVPTAAEVDAMTTTELKALL-SHCGGTSAGIVDKADLVAHVHKHVAKASQTKYNLIANICHDSPVTIGKETTAVNMDPLADGTYRVHVQNRSTDQWYEVQDLHVQETMPQLIGISESYVLIYERK 515          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|570318356|gb|ETO66304.1| (hypothetical protein F444_16445 [Phytophthora parasitica P1976])

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 281/557 (50.45%), Postives = 369/557 (66.25%), Query Frame = 0
Query:   18 RDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKG 574
            R   +  ++AP A   R KCPYLDT+N   LDFDFEK+CS+SLS+ N+Y CLVCGK+FQGRG  THA THS+   HHVF+NL T RI+CLPDNYEV+D++L  ++ AL PSF    IAQLD N  L +D  GVSYLPGF+GLNNLK TDY+NVV+QAL HV PLR++FL   +     K++LVLRFGE++RK+WS  NFK+T+SPH+ +QE+  +S KRF +G   E+V+ L+WLL+ LH GLGG+               K G  S++  CFQG + V T                    +D T   +  + E+E       AVS   SPFL +++D+P TPLFKDSQGG IIP IPL++VL+K+NG +V   ++     +K Y I  LP YLI  + R TRN+FF+EKNPTIVNFPVKNLELRDY   +  LPTEE L+  ++ EL+  ++ H     ++ VE+ DL E+   V   +  TKY+LVAN+ HDSP    ++ A +      G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES ++IYE+K 
Sbjct:    6 RKAENGDALAPSAK--RRKCPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM--GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNGLHRGLGGS--------------HKPG-SSIIHKCFQGFVEVTT--------------------NDETKAASADRTERES------AVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAYLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQNLPTEEELREKSIPELRALLRKHNQS-TEDCVEKADLVEKILRV--TLPCTKYNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 514          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|675205529|ref|XP_008911649.1| (hypothetical protein PPTG_16089 [Phytophthora parasitica INRA-310] >gi|568010256|gb|ETL84446.1| hypothetical protein L917_15706 [Phytophthora parasitica] >gi|568088243|gb|ETN03105.1| hypothetical protein PPTG_16089 [Phytophthora parasitica INRA-310])

HSP 1 Score: 555.058 bits (1429), Expect = 0.000e+0
Identity = 281/557 (50.45%), Postives = 368/557 (66.07%), Query Frame = 0
Query:   18 RDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKG 574
            R   +  ++AP A   R KCPYLDT+N   LDFDFEK+CS SLS+ N+Y CLVCGK+FQGRG  THA THS+   HHVF+NL T RI+CLPDNYEV+D++L  ++ AL PSF    IAQLD N  L +D  GVSYLPGF+GLNNLK TDY+NVV+QAL HV PLR++FL   +     K++LVLRFGE++RK+WS  NFK+T+SPH+ +QE+  +S KRF +G   E+V+ L+WLL++LH GLGG+               K G  S++  CFQG + V T                    +D T   +    E+E       AVS   SPFL +++D+P TPLFKDSQGG IIP IPL++VL+K+NG +V   ++     +K Y I  LP YLI  + R TRN+FF+EKNPTIVNFPVKNLELRDY   +  LPTEE L+  ++ EL+  ++ H     ++ VE+ DL E+   V   +  TKY+LVAN+ HDSP    ++ A +      G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES ++IYE+K 
Sbjct:    6 RKAENGDALAPSAK--RRKCPYLDTINHQLLDFDFEKVCSTSLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM--GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGGS--------------HKPG-SSIIHKCFQGFVEVTT--------------------NDETKAASADPTERES------AVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAYLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQNLPTEEELREKSIPELRALLRKHNQS-TEDCVEKADLVEKILRV--TLPCTKYNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 514          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|570972666|gb|ETP35458.1| (hypothetical protein F442_16315 [Phytophthora parasitica P10297])

HSP 1 Score: 554.673 bits (1428), Expect = 0.000e+0
Identity = 281/557 (50.45%), Postives = 368/557 (66.07%), Query Frame = 0
Query:   18 RDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKG 574
            R   +  ++AP A   R KCPYLDT+N   LDFDFEK+CS+SLS+ N+Y CLVCGK+FQGRG  THA THS+   HHVF+NL T RI+CLPDNYEV+D++L  ++ AL PSF    IAQLD N  L +D  GVSYLPGF+GLNNLK TDY+NVV+QAL HV PLR++FL   +     K++LVLRFGE++RK+WS  NFK+T+SPH+ +QE+  +S KRF +G   E+V+ L+WLL++LH GLGG+               K G  S++  CFQG + V T              E +    D T R              E AVS   SPFL +++D+P TPLFKDSQGG IIP IPL++VL+K+NG +V   ++     +K Y I  LP +LI  + R TRN+FF+EKNPTIVNFPVKNLELRDY   +  LPTEE L+  ++ EL+  ++ H     ++ VE+ DL E+   V   +  TKY+LVAN+ HDSP    ++ A +      G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES ++IYE+K 
Sbjct:    6 RKAENGDALAPSAK--RRKCPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM--GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGGS--------------HKPG-SSIIHKCFQGFVEVTT------------NDETKAASTDPTER--------------ESAVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAFLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQNLPTEEELREKSIPELRALLRKHNQS-TEDCVEKADLVEKILRV--TLPCTKYNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 514          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|567980733|gb|ETL31185.1| (hypothetical protein L916_15908 [Phytophthora parasitica] >gi|568040160|gb|ETM37622.1| hypothetical protein L914_15843 [Phytophthora parasitica] >gi|570942140|gb|ETP07397.1| hypothetical protein F441_16302 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 554.673 bits (1428), Expect = 0.000e+0
Identity = 280/557 (50.27%), Postives = 369/557 (66.25%), Query Frame = 0
Query:   18 RDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKG 574
            R   +  ++AP A   R KCPYLDT+N   LDFDFEK+CS+SLS+ N+Y CLVCGK+FQGRG  THA THS+   HHVF+NL T RI+CLPDNYEV+D++L  ++ AL PSF    IAQLD N  L +D  GVSYLPGF+GLNNLK TDY+NVV+QAL HV PLR++FL   +     K++LVLRFGE++RK+WS  NFK+T+SPH+ +QE+  +S KRF +G   E+V+ L+WLL++LH GLGG+               K G  S++  CFQG + V T                    +D T   +    E+E       AVS   SPFL +++D+P TPLFKDSQGG IIP IPL++VL+K+NG +V   ++     +K Y I  LP +LI  + R TRN+FF+EKNPTIVNFPVKNLELRDY   +  LPTEE L+  ++ EL+  ++ H     ++ VE+ DL E+   V   +  TKY+LVAN+ HDSP    ++ A +      G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES ++IYE+K 
Sbjct:    6 RKAENGDALAPSAK--RRKCPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM--GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGGS--------------HKPG-SSIIHKCFQGFVEVTT--------------------NDETKAASADPTERES------AVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAFLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQNLPTEEELREKSIPELRALLRKHNQS-TEDCVEKADLVEKILRV--TLPCTKYNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 514          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|299470225|emb|CBN79529.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 554.673 bits (1428), Expect = 0.000e+0
Identity = 295/526 (56.08%), Postives = 366/526 (69.58%), Query Frame = 0
Query:   57 SVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKE--GEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPE-AGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVL----NEVAGTKYDLVANVVHDSPPGQEKKEAARGEATP--PGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKK 573
            S+SLSN N+Y CLVCGK+FQGRG  THA+THS+ + HHVF+NL T R++CLPD+YEV+DSSL+DIKRAL P ++P  IA LD NTTL RD +GV+YLPGFVGLNNLK TD+VNVVL AL HV PLRN+F++P  Y+  +K+ LV  FGEV+R++WS  NFKS VSPH+F+Q V  AS KRF  G   EA+DFL+WLL+ LH GLGGT              +KAG  SVV   FQG + V TLTK +K        E  G   +  G+   A  E E  G    +W   +   PFL LT+DIP TPLFKDSQGG IIP IPL+ VLDK+NG    D VK GV TRK+Y + RLP+YLI  LAR T+N+F+VEKNPTIVNFPVKNLEL+D+   E  GLP EE L  M++ +LK  +  +    +K+ VER DLEE+ R  L     E+  TKY+L+ANV HDSPPGQ K+    G+  P   G YR HV N+A++QWYE+QDLHVQET+PQLI +SES ++IYE+K
Sbjct:    9 SISLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQNGHHVFINLRTCRVYCLPDSYEVVDSSLEDIKRALDPRYSPECIAVLDKNTTLSRDQYGVAYLPGFVGLNNLKCTDFVNVVLHALAHVPPLRNFFVEPDNYK-DSKSTLVHAFGEVVRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGVQSEAIDFLAWLLNSLHQGLGGT--------------RKAG-SSVVFQTFQGLVEVETLTKKKKAILDDDDEEGGGGVGNARGKAGAAAAEDELVGFDEADWDKKKAEVPFLHLTLDIPATPLFKDSQGGNIIPQIPLFKVLDKYNGENWTDVVKGGVLTRKRYVLRRLPRYLIFHLARFTKNNFYVEKNPTIVNFPVKNLELKDWLRAEDPGLPKEEDLAGMSIKQLKAHLNKYSIS-SKDCVERRDLEEKVRDTLIKTVPELLATKYNLLANVCHDSPPGQGKE----GQTDPLSAGCYRAHVQNKATEQWYEVQDLHVQETMPQLIGLSESYIIIYERK 513          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|567952074|gb|ETK77755.1| (hypothetical protein L915_16013 [Phytophthora parasitica])

HSP 1 Score: 553.518 bits (1425), Expect = 0.000e+0
Identity = 280/557 (50.27%), Postives = 368/557 (66.07%), Query Frame = 0
Query:   18 RDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKG 574
            R   +  ++AP A   R KCPYLDT+N   LDFDFEK+CS SLS+ N+Y CLVCGK+FQGRG  THA THS+   HHVF+NL T RI+CLPDNYEV+D++L  ++ AL PSF    IAQLD N  L +D  GVSYLPGF+GLNNLK TDY+NVV+QAL HV PLR++FL   +     K++LVLRFGE++RK+WS  NFK+T+SPH+ +QE+  +S KRF +G   E+V+ L+WLL++LH GLGG+               K G  S++  CFQG + V T                    +D T   +    E+E       AVS   SPFL +++D+P TPLFKDSQGG IIP IPL++VL+K+NG +V   ++     +K Y I  LP +LI  + R TRN+FF+EKNPTIVNFPVKNLELRDY   +  LPTEE L+  ++ EL+  ++ H     ++ VE+ DL E+   V   +  TKY+LVAN+ HDSP    ++ A +      G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES ++IYE+K 
Sbjct:    6 RKAENGDALAPSAK--RRKCPYLDTINHQLLDFDFEKVCSTSLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM--GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGGS--------------HKPG-SSIIHKCFQGFVEVTT--------------------NDETKAASADPTERES------AVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAFLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQNLPTEEELREKSIPELRALLRKHNQS-TEDCVEKADLVEKILRV--TLPCTKYNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 514          
BLAST of EWM29334.1 vs. NCBI_GenBank
Match: gi|566014609|gb|ETI37520.1| (hypothetical protein F443_16481 [Phytophthora parasitica P1569])

HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0
Identity = 279/557 (50.09%), Postives = 368/557 (66.07%), Query Frame = 0
Query:   18 RDRASTSSVAPKASSLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAGLPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKG 574
            R   +  ++AP A   R KCPYLDT+N   LDFDFEK+CS+SLS+ N+Y CLVCGK+FQGRG  THA THS+   HHVF+NL T RI+CLPDNYEV+D++L  ++ AL PSF    IAQLD N  L +D  GVSYLPGF+GLNNLK TDY+NVV+QAL HV PLR++FL   +     K++LVLRFGE++RK+WS  NFK+T+SPH+ +QE+  +S KRF +G   E+V+ L+WLL++LH GLGG+               K G  S++  CFQG + V T                    +D T   +    E+E       AVS   SPFL +++D+P TPLFKDSQGG IIP IPL++VL+K+NG +V   ++     +K Y I  LP +LI  + R TRN+F +EKNPTIVNFPVKNLELRDY   +  LPTEE L+  ++ EL+  ++ H     ++ VE+ DL E+   V   +  TKY+LVAN+ HDSP    ++ A +      G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES ++IYE+K 
Sbjct:    6 RKAENGDALAPSAK--RRKCPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM--GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGGS--------------HKPG-SSIIHKCFQGFVEVTT--------------------NDETKAASADPTERES------AVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAFLIFHVKRFTRNNFCIEKNPTIVNFPVKNLELRDYLKLDQNLPTEEELREKSIPELRALLRKHNQS-TEDCVEKADLVEKILRV--TLPCTKYNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 514          
The following BLAST results are available for this feature:
BLAST of EWM29334.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111861|gb|EWM29334.1|0.000e+0100.00u4 tri-snrnp-associated protein 2 [Nannochloropsis... [more]
gi|612134635|dbj|BAO65810.1|0.000e+054.63ubiquitin specific peptidase 39 [Ciliophrys infusi... [more]
gi|698799066|ref|XP_009832562.1|0.000e+051.43hypothetical protein H257_08404 [Aphanomyces astac... [more]
gi|570318356|gb|ETO66304.1|0.000e+050.45hypothetical protein F444_16445 [Phytophthora para... [more]
gi|675205529|ref|XP_008911649.1|0.000e+050.45hypothetical protein PPTG_16089 [Phytophthora para... [more]
gi|570972666|gb|ETP35458.1|0.000e+050.45hypothetical protein F442_16315 [Phytophthora para... [more]
gi|567980733|gb|ETL31185.1|0.000e+050.27hypothetical protein L916_15908 [Phytophthora para... [more]
gi|299470225|emb|CBN79529.1|0.000e+056.08conserved unknown protein [Ectocarpus siliculosus][more]
gi|567952074|gb|ETK77755.1|0.000e+050.27hypothetical protein L915_16013 [Phytophthora para... [more]
gi|566014609|gb|ETI37520.1|0.000e+050.09hypothetical protein F443_16481 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1342rna1342Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications