EWM29333.1, cds1338 (CDS) Nannochloropsis gaditana

Overview
NameEWM29333.1
Unique Namecds1338
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:389390..392425 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29333.1
Productindole-3-glycerol phosphate synthase
Orig transcript idgnl|cribi|Naga_100205g4.2985.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:389390..392425 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004425indole-3-glycerol-phosphate synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR011060RibuloseP-bd_barrel
IPR013785Aldolase_TIM
IPR013798Indole-3-glycerol_P_synth
Homology
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|585111860|gb|EWM29333.1| (indole-3-glycerol phosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 2045.01 bits (5297), Expect = 0.000e+0
Identity = 1011/1011 (100.00%), Postives = 1011/1011 (100.00%), Query Frame = 0
Query:    1 MKLSAWRANLQHSQHRQSLLFCLIATLTGVLVQAFVPHGNTVTAPIFPGPPPSPHRPSCRRARPLFMIDNFFRMHEKNRQLNWDDYFGKARYDHPHAFGSAAQVLTESLSVREAVDESLQQALYQLPACASIDLAIVAVHSSDTSEIDAVLTHLAQALPGHTRVLGWAGQSLGEAVRPAFEGLGARLVGEDGLPFISVTLASIPSVAGRGFYIGEEELRLWKAQGAAEASGQEVPVGGQDQGGTDEENVGEVSSAAAANSFLGPDKKWEQRVGVTVNEAYKDPPVILLLGSLEDASLAQAALQGLDRTYPGTARIGGLSDGVVLFSREGGPGSPQGARIFQEEGNGLLGLALLGDIRALTFVNQRVKRVPNTSTYRVESVSEDGKTIMEVSTPGGVRQTPVEAGLQAVLEGEEARALGLGDVDEEADMSAAESPGGARQGADRWSLVSVRGSQEPAAMLPAGWVFGSDGSLRLAGRVARKGQFLSIYVQDTGSTHEGEMGLVGALRREVDDEWGKAELGVTKFRPAGVLLAKDAAYPSQGIGQDFGEALGDTLAGTPIAGLVMDTAQFAPLVMTRSSALYHESLVVHVLACKAKRRDLREIRFRDRGLPGAGASNTKPSPLDMPFDPQRPVMDEATGEVAVNRQAALIGTDVRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRNWATMGSNSGSKHRAVEWLQDPVVQASLQARREGAGAGGAPLILVEGRSNLSDAEKEELKRLGVGGEVFAFADLPSSVRVEAGREKNGMGSQNGGPSGLGMGGTSMGGGKSIESLKELLRAQAAASSSTPP 1011
            MKLSAWRANLQHSQHRQSLLFCLIATLTGVLVQAFVPHGNTVTAPIFPGPPPSPHRPSCRRARPLFMIDNFFRMHEKNRQLNWDDYFGKARYDHPHAFGSAAQVLTESLSVREAVDESLQQALYQLPACASIDLAIVAVHSSDTSEIDAVLTHLAQALPGHTRVLGWAGQSLGEAVRPAFEGLGARLVGEDGLPFISVTLASIPSVAGRGFYIGEEELRLWKAQGAAEASGQEVPVGGQDQGGTDEENVGEVSSAAAANSFLGPDKKWEQRVGVTVNEAYKDPPVILLLGSLEDASLAQAALQGLDRTYPGTARIGGLSDGVVLFSREGGPGSPQGARIFQEEGNGLLGLALLGDIRALTFVNQRVKRVPNTSTYRVESVSEDGKTIMEVSTPGGVRQTPVEAGLQAVLEGEEARALGLGDVDEEADMSAAESPGGARQGADRWSLVSVRGSQEPAAMLPAGWVFGSDGSLRLAGRVARKGQFLSIYVQDTGSTHEGEMGLVGALRREVDDEWGKAELGVTKFRPAGVLLAKDAAYPSQGIGQDFGEALGDTLAGTPIAGLVMDTAQFAPLVMTRSSALYHESLVVHVLACKAKRRDLREIRFRDRGLPGAGASNTKPSPLDMPFDPQRPVMDEATGEVAVNRQAALIGTDVRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRNWATMGSNSGSKHRAVEWLQDPVVQASLQARREGAGAGGAPLILVEGRSNLSDAEKEELKRLGVGGEVFAFADLPSSVRVEAGREKNGMGSQNGGPSGLGMGGTSMGGGKSIESLKELLRAQAAASSSTPP
Sbjct:    1 MKLSAWRANLQHSQHRQSLLFCLIATLTGVLVQAFVPHGNTVTAPIFPGPPPSPHRPSCRRARPLFMIDNFFRMHEKNRQLNWDDYFGKARYDHPHAFGSAAQVLTESLSVREAVDESLQQALYQLPACASIDLAIVAVHSSDTSEIDAVLTHLAQALPGHTRVLGWAGQSLGEAVRPAFEGLGARLVGEDGLPFISVTLASIPSVAGRGFYIGEEELRLWKAQGAAEASGQEVPVGGQDQGGTDEENVGEVSSAAAANSFLGPDKKWEQRVGVTVNEAYKDPPVILLLGSLEDASLAQAALQGLDRTYPGTARIGGLSDGVVLFSREGGPGSPQGARIFQEEGNGLLGLALLGDIRALTFVNQRVKRVPNTSTYRVESVSEDGKTIMEVSTPGGVRQTPVEAGLQAVLEGEEARALGLGDVDEEADMSAAESPGGARQGADRWSLVSVRGSQEPAAMLPAGWVFGSDGSLRLAGRVARKGQFLSIYVQDTGSTHEGEMGLVGALRREVDDEWGKAELGVTKFRPAGVLLAKDAAYPSQGIGQDFGEALGDTLAGTPIAGLVMDTAQFAPLVMTRSSALYHESLVVHVLACKAKRRDLREIRFRDRGLPGAGASNTKPSPLDMPFDPQRPVMDEATGEVAVNRQAALIGTDVRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRNWATMGSNSGSKHRAVEWLQDPVVQASLQARREGAGAGGAPLILVEGRSNLSDAEKEELKRLGVGGEVFAFADLPSSVRVEAGREKNGMGSQNGGPSGLGMGGTSMGGGKSIESLKELLRAQAAASSSTPP 1011          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|738041842|ref|WP_036000738.1| (indole-3-glycerol-phosphate synthase [Leptolyngbya sp. JSC-1])

HSP 1 Score: 124.405 bits (311), Expect = 1.274e-27
Identity = 74/240 (30.83%), Postives = 134/240 (55.83%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRNWATMGSNSGS 891
            V V+N+ + V+     PR + E +VW KE+E+   RE  PL+ L R            V+ +A  LD  +AL+         A++ ++ + +P  GV+   +DP + A++ +AGG A  ++V  D  ++ G ++++++++ A+    +P++  D V+YPYQ+Y A+L GAD V +   +ILSD+DLQY +KI   L +  ++ V +L +L R   L L+   ++ I++RN  T   +  +
Sbjct:   12 VSVENLRYQVKVPDAEPRHILEKIVWHKEKEVDQRRERMPLIELQRK-----------VRDEAPPLDFIDALQQARTHP---ALIAEVKKASPSKGVICENFDPIRIAQSYVAGG-AACISVLTDSKFFQGGFEYLKQIRAAV---DIPLLCKDFVIYPYQIYWARLHGADAVLLIA-AILSDKDLQYFLKIASALGMAALVEVHTLEELDR--VLGLSGVRLIGINNRNLETFTVDLNT 230          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|1132230233|ref|WP_075898414.1| (indole-3-glycerol phosphate synthase [Moorea bouillonii] >gi|1130577006|gb|OLT59242.1| indole-3-glycerol phosphate synthase [Moorea bouillonii PNG])

HSP 1 Score: 122.479 bits (306), Expect = 4.984e-27
Identity = 77/231 (33.33%), Postives = 133/231 (57.58%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKA-QTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRN 881
            V++  + + V      P  + E +VW KE+E+  +RE  PL+ L + V           Q      D   ALK+ +T  G    ++ +I + +P  GV+   +DP   A++   GG A A++V  DQT++ G ++++ +V+ A+    VP++  + ++YPYQ+Y+A+  GAD V +   +ILSD+DLQY +KI +TLS+TP+I V + S+L R   L L+  +++ I++RN
Sbjct:   12 VKIQTLHYQVALPDDKPHHILEEIVWHKEKEIDQMRESLPLVELRKRV-----------QTAPPPRDFLAALKSGKTSPG----LIAEIKKASPSKGVIREDFDPVAIAQSYSQGG-ASAISVLTDQTFFQGSWENLAKVRAAVD---VPLLCKEFIIYPYQMYMARSHGADAVLLIA-AILSDQDLQYFIKIAKTLSITPLIEVHTQSELDR--VLSLDGVTLVGINNRN 220          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|496440209|ref|WP_009149054.1| (indole-3-glycerol-phosphate synthase [Moorea producens] >gi|332351370|gb|EGJ30954.1| indole-3-glycerol phosphate synthase [Moorea producens 3L] >gi|1130584506|gb|OLT66741.1| indole-3-glycerol phosphate synthase [Moorea producens PAL])

HSP 1 Score: 121.324 bits (303), Expect = 1.652e-26
Identity = 74/230 (32.17%), Postives = 130/230 (56.52%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRN 881
            V++  + + V      P  + E +VW KE+E+  +RE  PL+ L +            VQ      D   ALK+        A++ +I + +P  GV+   +DP   A++   GG A A++V  DQ ++ G ++++ +V+ A+    +P++  + ++YPYQ+Y+A+  GAD V +   +ILSD+DLQY +KI +TLS+TP+I V + S+L R   L L+  +++ I++RN
Sbjct:   12 VKIQTLHYQVALPDDKPHHILEEIVWHKEKEIDQMRESLPLVELRK-----------GVQTAPPPRDFLAALKSGKTSP---ALIAEIKKASPSKGVIREDFDPVAIAQSYCQGG-ASAISVLTDQKFFQGSWENLAKVRAAVD---MPLLCKEFIIYPYQMYMARSHGADAVLLIA-AILSDQDLQYFIKIAKTLSITPLIEVHTQSELDR--VLSLDGVTLVGINNRN 220          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|1084329956|ref|WP_070394015.1| (indole-3-glycerol-phosphate synthase [Moorea producens] >gi|1082411972|gb|AOX01577.1| indole-3-glycerol phosphate synthase [Moorea producens PAL-8-15-08-1])

HSP 1 Score: 120.939 bits (302), Expect = 1.699e-26
Identity = 74/230 (32.17%), Postives = 131/230 (56.96%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRN 881
            V++ ++ + V      P  + E +VW KE+E+  +RE  PL+ L + +           Q      D   ALK+        A++ +I + +P  GV+   +DP   A++   GG A A++V  DQ ++ G ++++ +V+ A+    VP++  + ++YPYQ+Y+A+  GAD V +   +ILSD+DLQY +KI +TLS+TP+I V + S+L R   L L+  +++ I++RN
Sbjct:   12 VKIKSLHYQVALPDDKPHHILEEIVWHKEKEIDQMRESLPLVELRKRI-----------QTSPPPRDFLAALKSGKTSP---ALIAEIKKASPSKGVIREDFDPVAIAQSYSQGG-ASAISVLTDQKFFEGSWENLAKVRAAVD---VPLLCKEFIIYPYQMYMARSHGADAVLLIA-AILSDQDLQYFIKIAKTLSITPLIEVHTQSELDR--VLSLDGVTLVGINNRN 220          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|497240913|ref|WP_009555155.1| (indole-3-glycerol-phosphate synthase [Oscillatoriales cyanobacterium JSC-12] >gi|410713081|gb|EKQ70582.1| Indole-3-glycerol phosphate synthase [Oscillatoriales cyanobacterium JSC-12])

HSP 1 Score: 120.939 bits (302), Expect = 1.998e-26
Identity = 80/233 (34.33%), Postives = 127/233 (54.51%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKY---QHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRN 881
            V V  + + V      PR + E +VW KE E+  +RE  PL N +R+           VQ      D  +ALK  ++     AV+ ++ + +P  GV+   +DP + AR+   GG A  ++V  D+ ++ G +   Q +REV D      +P++  D +LYPYQ+Y A+L GAD V +   +IL D+DLQY +KI  TL LT ++ V +L++L RA A  L   +++ I++RN
Sbjct:   12 VAVQELRYQVALPDAKPRHILEEIVWHKEAEVDQLREFLPL-NELRS----------KVQTAPPTRDFLQALKQSSIHP---AVIAEVKKASPSKGVIREEFDPVEIARSYKQGG-ATCLSVLTDKKFFQGSFDYLQQIREVVD------IPLLCKDFILYPYQMYYARLHGADAVLLIA-AILPDKDLQYFIKIAATLGLTALVEVHTLAELDRALA--LEGVTLIGINNRN 220          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|808799983|ref|WP_046281871.1| (indole-3-glycerol-phosphate synthase [Limnoraphis robusta] >gi|807212165|gb|KKD34968.1| indole-3-glycerol phosphate synthase [Limnoraphis robusta CS-951])

HSP 1 Score: 120.553 bits (301), Expect = 2.734e-26
Identity = 72/252 (28.57%), Postives = 140/252 (55.56%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRNWATMGSNSGSKHRAVEWLQDPV 903
            V V ++ + +      P+++ E +VW KERE+   RE  PL+ L R +       +   Q K    D   ALK    +    A++ ++ + +P  G++   +DP   A+A    G A  ++V  D+ ++ G ++++ +++ A+    +P++  + V+YPYQ+YLA+++GAD V +   +ILS++DLQY +KI ++L +TP+I V +L +L R   L L+  +++ I++RN      +  +  + +E  Q+ +
Sbjct:   12 VAVASLCYKIAVPDDQPQNILEEIVWEKEREVDRRREGLPLLELRRQL-------EGLPQTK----DFLAALKTSPTQP---AIIAEVKKASPSKGIIREDFDPVNIAQAYQENG-ASCISVLTDEKFFQGSFENLGKIRAAVN---IPLLCKEFVIYPYQIYLARIYGADAVLLIA-AILSNQDLQYFLKIVKSLGMTPLIEVHTLDELER--VLSLDGVNLIGINNRNLQDFSVDLDTTRQLLEAKQEQI 242          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|1094115806|ref|WP_071105305.1| (indole-3-glycerol-phosphate synthase [Moorea producens] >gi|1092223662|gb|AOY82004.1| indole-3-glycerol phosphate synthase [Moorea producens JHB])

HSP 1 Score: 119.783 bits (299), Expect = 5.070e-26
Identity = 74/230 (32.17%), Postives = 129/230 (56.09%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRN 881
            V++  + + V      P  + E +VW KE+E+  +RE  PL+ L + V           Q      D   ALK         A++ +I + +P  GV+   +DP   A++   GG A A++V  DQ ++ G ++++ +V+ A+    +P++  + ++YPYQ+Y+A+  GAD V +   +ILSD+DLQY +KI +TLS+TP+I V + S+L R   L L+  +++ I++RN
Sbjct:   12 VKIQTLHYQVALPDDKPHHILEEIVWHKEKEIDQMRESLPLVELRKRV-----------QTAPPPRDFLAALKLGKTSP---ALIAEIKKASPSKGVIREDFDPVAIAQSYCQGG-ASAISVLTDQKFFQGSWENLAKVRAAVD---LPLLCKEFIIYPYQMYMARSHGADAVLLIA-AILSDQDLQYFIKIAKTLSITPLIEVHTQSELDR--VLSLDGVTLVGINNRN 220          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|506264498|ref|WP_015784273.1| (indole-3-glycerol-phosphate synthase [Cyanothece sp. PCC 8802] >gi|256590602|gb|ACV01489.1| Indole-3-glycerol-phosphate synthase [Cyanothece sp. PCC 8802])

HSP 1 Score: 119.398 bits (298), Expect = 6.329e-26
Identity = 82/272 (30.15%), Postives = 139/272 (51.10%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRNWATMGSNSGSKHRAVEWLQDPVVQASLQARREGAGAGGAPLI 923
            V VD + + V+     PR + E +VW KE+E+  +RE  PL+ L + V  +    D               L A T    + A++ ++ + +P  GV+   +DP   A+A + GG A  ++V  D  ++ G ++++  V+ ++    +P++  + +LYPYQ+YLA+  GAD V +   +ILSD DL Y +KI QTL +T +I V SL++L R  A  +   S++ I++RN  T   +  +  +             L ARR+   A G  +I
Sbjct:   12 VEVDTLRYQVKVPDGEPRHILEEIVWHKEKEVDRLRESLPLLELRKQVQHLPPPQDF--------------LGAITQGKTQPALIAEVKKASPSKGVIREDFDPVAIAQAYVKGG-ASCLSVLTDAKFFQGSFENLALVRQSVD---LPLLCKEFILYPYQIYLARTKGADAVLLIA-AILSDRDLSYFLKIIQTLGMTALIEVHSLTELDRVLA--IEGVSLIGINNRNLETFKVDLKTTSQL------------LAARRDKIQALGIKII 250          
BLAST of EWM29333.1 vs. NCBI_GenBank
Match: gi|501593811|ref|WP_012596713.1| (indole-3-glycerol-phosphate synthase [Cyanothece sp. PCC 8801] >gi|226707954|sp|B7K0H0.1|TRPC_CYAP8 RecName: Full=Indole-3-glycerol phosphate synthase; Short=IGPS >gi|218168717|gb|ACK67454.1| Indole-3-glycerol-phosphate synthase [Cyanothece sp. PCC 8801])

HSP 1 Score: 119.013 bits (297), Expect = 7.801e-26
Identity = 75/234 (32.05%), Postives = 127/234 (54.27%), Query Frame = 0
Query:  652 VRVDNMAWNVREESVYPRSLFESMVWTKERELYFVREDAPLMNLMRTVMMMIKNPDAAVQAKARGLDVTEALKAQTVEGDKWAVLGDISRGTPFHGVLAPLYDPEQAARATIAGGQAGAVAVRVDQTYYGGKYQHVREVKDALREARVPVVADDLVLYPYQLYLAKLFGADGVKMGQLSILSDEDLQYQVKICQTLSLTPIISVASLSQLRRAAALPLNQTSVLTIDDRNWATM 885
            V VD + + V+     PR + E +VW KE+E+  +RE  PL+ L + V  +    D               L A T    + A++ ++ + +P  GV+   +DP   A+A + GG A  ++V  D  ++ G ++++  V+ ++    +P++  + +LYPYQ+YLA+  GAD V +   +ILSD DL Y +KI QTL +T +I V SL++L R  A  +   S++ I++RN  T 
Sbjct:   12 VEVDTLRYQVKVPDGEPRHILEEIVWHKEKEVDRLRESLPLLELRKQVQHLPPPQDF--------------LGAITQGKTQPALIAEVKKASPSKGVIREDFDPVAIAQAYVKGG-ASCLSVLTDAKFFQGSFENLALVRQSVD---LPLLCKEFILYPYQIYLARTKGADAVLLIA-AILSDRDLSYFLKIIQTLGMTALIEVHSLTELDRVLA--IEGVSLIGINNRNLETF 224          
The following BLAST results are available for this feature:
BLAST of EWM29333.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111860|gb|EWM29333.1|0.000e+0100.00indole-3-glycerol phosphate synthase [Nannochlorop... [more]
gi|738041842|ref|WP_036000738.1|1.274e-2730.83indole-3-glycerol-phosphate synthase [Leptolyngbya... [more]
gi|1132230233|ref|WP_075898414.1|4.984e-2733.33indole-3-glycerol phosphate synthase [Moorea bouil... [more]
gi|496440209|ref|WP_009149054.1|1.652e-2632.17indole-3-glycerol-phosphate synthase [Moorea produ... [more]
gi|1084329956|ref|WP_070394015.1|1.699e-2632.17indole-3-glycerol-phosphate synthase [Moorea produ... [more]
gi|497240913|ref|WP_009555155.1|1.998e-2634.33indole-3-glycerol-phosphate synthase [Oscillatoria... [more]
gi|808799983|ref|WP_046281871.1|2.734e-2628.57indole-3-glycerol-phosphate synthase [Limnoraphis ... [more]
gi|1094115806|ref|WP_071105305.1|5.070e-2632.17indole-3-glycerol-phosphate synthase [Moorea produ... [more]
gi|506264498|ref|WP_015784273.1|6.329e-2630.15indole-3-glycerol-phosphate synthase [Cyanothece s... [more]
gi|501593811|ref|WP_012596713.1|7.801e-2632.05indole-3-glycerol-phosphate synthase [Cyanothece s... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1340rna1340Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications