EWM29342.1, cds1337 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|585111869|gb|EWM29342.1| (glutathione-dependent formaldehyde-activating gfa [Nannochloropsis gaditana]) HSP 1 Score: 276.944 bits (707), Expect = 2.020e-94 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
Query: 1 MQGTATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
MQGTATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR
Sbjct: 1 MQGTATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|1088673691|gb|OHE84136.1| (aldehyde-activating protein [Xanthomonadales bacterium RIFOXYA1_FULL_69_10] >gi|1088679007|gb|OHE88640.1| aldehyde-activating protein [Xanthomonadales bacterium RIFOXYD1_FULL_69_11]) HSP 1 Score: 140.198 bits (352), Expect = 3.656e-40 Identity = 69/123 (56.10%), Postives = 82/123 (66.67%), Query Frame = 0
Query: 8 STEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIA 130
+T L GGCHCG+VRF VPV +LL+C CS C G+LHL VPAA+ QL+ AL EYRFNT A H FC+ CGV+ FY PRSHP+G+SVN RCLDGGVP RV FD + + A
Sbjct: 9 ATRTLAGGCHCGRVRFEVDVPVHATLLDCNCSICRMTGYLHLIVPAASFRQLD--GSDALAEYRFNTGVARHLFCRHCGVKPFYVPRSHPDGVSVNGRCLDGGVPADARVVAFDDNDRDTATA 129
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|1086299679|emb|SDL90982.1| (Uncharacterized conserved protein [Maricaulis salignorans]) HSP 1 Score: 139.813 bits (351), Expect = 3.970e-40 Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = 0
Query: 4 TATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
T TP+ + HGGCHCG VRF+ ++P + L+C CS CA+ GF+H+ P A DF++ E LTEYRFNT TA H+FC+ CGV++F PRSHP+ SVN RC D R QEFDG WEA+IA I
Sbjct: 2 TTTPAKKPRHGGCHCGAVRFAAILPDNVVALSCNCSICAKTGFIHVITPGA-DFRI-MHGEDMLTEYRFNTGTAKHYFCRQCGVEAFNVPRSHPDDWSVNLRCFDADAALLPRFQEFDGANWEANIANIN 129
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|746969978|gb|KIF27225.1| (aldehyde-activating protein [Aphanocapsa montana BDHKU210001]) HSP 1 Score: 137.502 bits (345), Expect = 2.945e-39 Identity = 68/125 (54.40%), Postives = 81/125 (64.80%), Query Frame = 0
Query: 9 TEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
T+ HGGCHCG VRF+ +P + L+C CS C GF+H+ VP A DF LE + LT+YRFNT TA H FCK CGV+SFYRPRSHP+ SVN RC D R++ FDG WEA IA I
Sbjct: 6 TKPRHGGCHCGAVRFTADLPDQVAALSCNCSICTMTGFIHVIVPEA-DFHLESGKDN-LTDYRFNTGTAQHLFCKTCGVKSFYRPRSHPDAWSVNLRCFDADQGLSGRIEPFDGANWEASIASIN 128
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|488871550|ref|WP_002783775.1| (Similar to tr|Q7NFC1|Q7NFC1 [Microcystis aeruginosa] >gi|389790651|emb|CCI13507.1| Similar to tr|Q7NFC1|Q7NFC1 [Microcystis aeruginosa PCC 9806]) HSP 1 Score: 138.272 bits (347), Expect = 3.160e-39 Identity = 67/130 (51.54%), Postives = 85/130 (65.38%), Query Frame = 0
Query: 4 TATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
TAT +I GGCHCG +RF + D +L +C CS C + GFLHL VP+A F L E L+ Y FNT TA H+FC++CG+ FYRPRSHP+ I +N RCLDG V G ++Q FDG WE +I +IR
Sbjct: 24 TATTQAKIYGGGCHCGAIRFQVAIEQDQAL-DCNCSICQKKGFLHLIVPSA-QFTL-LSGEDFLSTYTFNTHTAQHYFCRVCGIHPFYRPRSHPDAIDINLRCLDGNVLGDFQIQFFDGANWEDNIEKIR 150
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|1002149552|gb|KXS90953.1| (aldehyde-activating protein [Microcystis aeruginosa NIES-88]) HSP 1 Score: 135.961 bits (341), Expect = 1.285e-38 Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 0
Query: 4 TATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
TAT +I GGCHCG +RF + D +L +C CS C + GFLHL VP+A F L E L+ Y FNT TA H+FC++CG+ FYRPRSHP+ I +N RCL+G V G ++Q FDG WE +I +IR
Sbjct: 2 TATTQAKIYGGGCHCGAIRFQVAIEQDQAL-DCNCSICQKKGFLHLIVPSAQ-FTL-LSGEDFLSTYTFNTHTAQHYFCRVCGIHPFYRPRSHPDAIDINLRCLEGNVLGDFQIQFFDGANWEDNIEKIR 128
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|718247308|dbj|GAL95514.1| (Gfa-like protein [Microcystis aeruginosa NIES-44]) HSP 1 Score: 135.961 bits (341), Expect = 1.514e-38 Identity = 66/130 (50.77%), Postives = 84/130 (64.62%), Query Frame = 0
Query: 4 TATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
T T +I GGCHCG +RF + D +L +C CS C + GFLHL VP+A F L E L+ Y FNT TA H+FC++CG+ FYRPRSHP+ I +N RCLDG V G ++Q FDG WE +I +IR
Sbjct: 2 TGTTQAKIYGGGCHCGAIRFQVAIEHDQAL-DCNCSICQKKGFLHLIVPSAQ-FTL-LSGEDFLSTYTFNTHTAQHYFCRVCGIHPFYRPRSHPDAIDINLRCLDGNVLGDFQIQFFDGANWEDNIEKIR 128
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|1158728859|gb|OPF14690.1| (aldehyde-activating protein [Microcystis aeruginosa KW]) HSP 1 Score: 135.576 bits (340), Expect = 1.972e-38 Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 0
Query: 4 TATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
TAT +I GGCHCG +RF + D +L +C CS C + GFLHL VP+A L E L+ Y FNT TA H+FC++CG+ FYRPRSHP+ I +N RCL+G V G ++Q FDG WE +I +IR
Sbjct: 2 TATTQAKIYGGGCHCGAIRFQVAIEHDQAL-DCNCSICQKKGFLHLIVPSAQFTLLS--GEDFLSTYTFNTHTAQHYFCRVCGIHPFYRPRSHPDAIDINLRCLEGNVLGDFQIQFFDGANWEDNIEKIR 128
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|1173246106|ref|WP_081106800.1| (aldehyde-activating protein [Microcystis aeruginosa]) HSP 1 Score: 136.346 bits (342), Expect = 2.134e-38 Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 0
Query: 4 TATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
TAT +I GGCHCG +RF + D +L +C CS C + GFLHL VP+A F L E L+ Y FNT TA H+FC++CG+ FYRPRSHP+ I +N RCL+G V G ++Q FDG WE +I +IR
Sbjct: 24 TATTQAKIYGGGCHCGAIRFQVAIEQDQAL-DCNCSICQKKGFLHLIVPSA-QFTL-LSGEDFLSTYTFNTHTAQHYFCRVCGIHPFYRPRSHPDAIDINLRCLEGNVLGDFQIQFFDGANWEDNIEKIR 150
BLAST of EWM29342.1 vs. NCBI_GenBank
Match: gi|1172371078|ref|WP_080754349.1| (aldehyde-activating protein [Microcystis aeruginosa]) HSP 1 Score: 135.961 bits (341), Expect = 2.541e-38 Identity = 66/130 (50.77%), Postives = 84/130 (64.62%), Query Frame = 0
Query: 4 TATPSTEILHGGCHCGQVRFSCVVPVDTSLLNCTCSRCAQLGFLHLRVPAAADFQLECMAETALTEYRFNTRTAAHFFCKICGVQSFYRPRSHPEGISVNARCLDGGVPGHRRVQEFDGREWEAHIAEIR 133
T T +I GGCHCG +RF + D +L +C CS C + GFLHL VP+A F L E L+ Y FNT TA H+FC++CG+ FYRPRSHP+ I +N RCLDG V G ++Q FDG WE +I +IR
Sbjct: 24 TGTTQAKIYGGGCHCGAIRFQVAIEHDQAL-DCNCSICQKKGFLHLIVPSAQ-FTL-LSGEDFLSTYTFNTHTAQHYFCRVCGIHPFYRPRSHPDAIDINLRCLDGNVLGDFQIQFFDGANWEDNIEKIR 150 The following BLAST results are available for this feature:
BLAST of EWM29342.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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