EWM29339.1, cds1333 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|585111866|gb|EWM29339.1| (rab proteins geranylgeranyltransferase component a 2 [Nannochloropsis gaditana]) HSP 1 Score: 1649.03 bits (4269), Expect = 0.000e+0 Identity = 810/810 (100.00%), Postives = 810/810 (100.00%), Query Frame = 0
Query: 1 MSIDPREDGLEHQYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPTQAKLWDTPCVLRRRWPARRWRAAGGIDRGDREEGEKEEGSGEGTDPPIDEDAPSKCLMVLLPGHDSVSTRVIQIDENLPPRGRAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLGQGNMPAGWRGRRRRGGVDLRLGPEGGSGGRSLVRRVVLLDCAPAALSWKTGGMGGGPGDDQAEEGARTETGTCGGVMPPGTVPGCSGDHPGHSHPAVHFYCVDPAARCSPPGTFILYLATISSSRSSEGEGGNSDETSTAAARLLKAATCILIDSPGEHVLWAVTYEQPLGGLSYPEGKEACGEIPSGPPPPCASSPPSPSVAKNVLTVERIAPEFYLDSPLKQARHLFESICPGEAFLPAEVPEGVLPFDVATTDGGDDHEEALLEEAMTSLNLQKKTYPANEVTGTGRGHGLEHKKEERNT 810
MSIDPREDGLEHQYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPTQAKLWDTPCVLRRRWPARRWRAAGGIDRGDREEGEKEEGSGEGTDPPIDEDAPSKCLMVLLPGHDSVSTRVIQIDENLPPRGRAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLGQGNMPAGWRGRRRRGGVDLRLGPEGGSGGRSLVRRVVLLDCAPAALSWKTGGMGGGPGDDQAEEGARTETGTCGGVMPPGTVPGCSGDHPGHSHPAVHFYCVDPAARCSPPGTFILYLATISSSRSSEGEGGNSDETSTAAARLLKAATCILIDSPGEHVLWAVTYEQPLGGLSYPEGKEACGEIPSGPPPPCASSPPSPSVAKNVLTVERIAPEFYLDSPLKQARHLFESICPGEAFLPAEVPEGVLPFDVATTDGGDDHEEALLEEAMTSLNLQKKTYPANEVTGTGRGHGLEHKKEERNT
Sbjct: 1 MSIDPREDGLEHQYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPTQAKLWDTPCVLRRRWPARRWRAAGGIDRGDREEGEKEEGSGEGTDPPIDEDAPSKCLMVLLPGHDSVSTRVIQIDENLPPRGRAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLGQGNMPAGWRGRRRRGGVDLRLGPEGGSGGRSLVRRVVLLDCAPAALSWKTGGMGGGPGDDQAEEGARTETGTCGGVMPPGTVPGCSGDHPGHSHPAVHFYCVDPAARCSPPGTFILYLATISSSRSSEGEGGNSDETSTAAARLLKAATCILIDSPGEHVLWAVTYEQPLGGLSYPEGKEACGEIPSGPPPPCASSPPSPSVAKNVLTVERIAPEFYLDSPLKQARHLFESICPGEAFLPAEVPEGVLPFDVATTDGGDDHEEALLEEAMTSLNLQKKTYPANEVTGTGRGHGLEHKKEERNT 810
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|553191067|ref|XP_005855315.1| (hypothetical protein NGA_2102200, partial [Nannochloropsis gaditana CCMP526] >gi|422293745|gb|EKU21045.1| hypothetical protein NGA_2102200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 219.935 bits (559), Expect = 1.794e-64 Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0
Query: 437 LGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLGQGNMPAGWRGRRRRGGVDLRLGPEGGSGGRSLVRRVVL 545
LGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLR+QPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLGQGNMPA WRGRRRRGGVDLRLGPEGGSGGRSLVRRVVL
Sbjct: 1 LGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLREQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLGQGNMPAEWRGRRRRGGVDLRLGPEGGSGGRSLVRRVVL 109
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|695430327|ref|XP_009530414.1| (hypothetical protein PHYSODRAFT_387561, partial [Phytophthora sojae] >gi|348673166|gb|EGZ12985.1| hypothetical protein PHYSODRAFT_387561, partial [Phytophthora sojae]) HSP 1 Score: 177.948 bits (450), Expect = 3.413e-44 Identity = 143/500 (28.60%), Postives = 211/500 (42.20%), Query Frame = 0
Query: 11 EHQYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPTQAKLWDTPCVLRRRWPARRWRAAGGI---DRGDREEGEKEEGSGEGTDPPIDEDAPSKCLMVLLPGHDSVSTRVIQIDENLPPRGRAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSV---ELETDAYLQRPLRDFLE-HSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEH 503
E +YDV+++GTG+VE IL+ AL ++GK VL H D GS A P L RW I + GD ++ +K E + T IDED +LP S R++ EEG + T E L+ +S F++D++P ++++ ++ L++SGV YLEF + ++ SA SG S VPCSK DVF S LL EKRQLMKFLQ VAD+G + + +NE L R+L+RPQNK S + E + YL RP ++ LE H K+ LQ VV + + L P + Q++ EGL ++ ++ +G++ TAFL P+YG +L Q+F R+S+V+GG Y+LR + ET GV G ++ +H
Sbjct: 7 ETEYDVLLVGTGMVEGILAGALARIGKKVL---------------------------HLDQNDYYGSNYASFPLAQFL--------------RWTKNENIAPRNFGDEDDNDKVEKKVKDT-ATIDEDKQR-----VLPMKSSFECRLL------------------------------------------EEGFADEAT---KEELLRQSSSFSIDVNPRLMLSSEQLVEILITSGVGRYLEFAAIERTYVHFQSAV------------------------SGAKSEESDTVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERTLALGRALKRPQNKASQADGDAELEKYLDRPFQELLEKHFKLSSKLQQVVVYCVGLASFPA---------TKNQISAREGLEAVYRYVASIGRFTGTAFLAPLYGISELAQSFCRLSAVYGGIYVLRAPIDGFVLDTETNELRGVRCCDGDVLRTKH 381
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|156408209|ref|XP_001641749.1| (predicted protein [Nematostella vectensis] >gi|156228889|gb|EDO49686.1| predicted protein, partial [Nematostella vectensis]) HSP 1 Score: 173.326 bits (438), Expect = 4.022e-42 Identity = 140/534 (26.22%), Postives = 226/534 (42.32%), Query Frame = 0
Query: 13 QYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPT--------QAKLWD-----------------TPCVLRRRWPARRWRAAGGIDRGDREEGEKEEGSGEGTDPPIDEDAPSKCLMVLLPGHDSVSTRVIQIDENLPPRGRAGAEEGPFH----TTDGPTSAPPRA-FPSSSLPAQAEEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLGQGNMPAGWR 516
+YD I++GTGL EA+++AAL+++G VL+ ++ DYY + W SF + L W + ++K Q+P + P + K+ D PCV AA G + E E +GE + CL H++VS +D++ AG + TS+P A FP S +A+ + T D E R FN+DL+P +L++ G ++ L+S+ ++ Y EF+ + + I +G+ ++ VPCS+ DVFSS L+P EKR LMKFL D H +E E + +P +FL+ +M +LQ V HA+A++ + T +GL L LG+YG + F+WP+YG G+L QA+ RM +V+GG Y LR + V + C+ V+ +G +KC+ +++ +P+ WR
Sbjct: 7 EYDAIVLGTGLPEAVVAAALSRIGLKVLHLDRNDYYSSQ-WASFTFDGLLKWIQRNQKKQNPVQDKKQTDPITLEKEATEKDKIGDERTDQENETGNKEITDIAPCV------RDNVTAAFPAMHGSLAQNENNEITGESAA------ETTFCL------HENVSEESTIVDDSTQIEQGAGNNVSVTQPGSQIDEAETSSPSVASFPISRPQRRAKPAVNSDMTYSDLEPY---HRQFNIDLAPKLLLSRGALVESLISANISHYAEFK----------AVNQILTFLEGSMEA-------------------------VPCSRSDVFSSKLIPVIEKRLLMKFLTFCLD------------HNEHLE------------------EYKPFEDKPFVEFLKSRRMTPNLQHFVIHAIAMV--------------KPDALTIDGLNAAQSFLMSLGRYGNSPFIWPLYGLGELPQAYCRMCAVFGGLYCLRKSAESIVVDTKEKKCVKVV-SEGQELKCKWLIMEHTYLPSEWR 438
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|634853364|ref|XP_007940910.1| (PREDICTED: rab proteins geranylgeranyltransferase component A 2 [Orycteropus afer afer]) HSP 1 Score: 169.859 bits (429), Expect = 8.905e-41 Identity = 139/520 (26.73%), Postives = 215/520 (41.35%), Query Frame = 0
Query: 8 DGLEHQYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPTQAKLWDTPCVLRRRWPARR-----WRAAGGIDRGDREEGEKEEGSGEGTDPPIDEDAPSKCLM----------VLLPGHDSV------STRVIQIDENLPPRGRAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVL 506
D L ++DV+I+GTGL E+IL+AA ++ G+ VL+ + YYGG +W SF L +W K +++ + P + LR++ + + +D E G ++ + E S CL+ +P D++ S V I+E L G ++ HT DG P + ++ K N T ++ R FN+DL +L + G +I L+ S V+ Y EF+ + + I W+G VPCS+ DVF+S L EKR LMKF D+ QH +E E A+ QRP D+L+ K+ LQ V H++A+ E TT +GL+ LQ LG +G T FL+P+YG G+++Q F RM +V+GG Y LR + L V E+G C V+D G I ++ ++
Sbjct: 3 DSLPTEFDVVIVGTGLPESILAAACSRSGQRVLHVDSKSYYGG-NWASFSFSGLLSWLKDYQQICIDGEESTVKWPDLIHETEEAITLRKKDETIQHMEIFCYVSQDLDDNVEEIGALQKNLSTVASSTLTEPLDSACLVKDKRSVYVTKYKMPAKDTLKSDRETSLEVNDIEETLEKENDCG-DKTRVHT-DGDKDEKP-------VEDNMDQPKRNRIT---YSQILKEGRRFNIDLVSKLLYSQGLLIDLLIKSNVSRYAEFK----------NVTRILTFWEG-------------------------KVEQVPCSRADVFNSKELTMVEKRMLMKFFTFCTDF---------EQHPDEYE---------------------AFKQRPFSDYLKTKKLTPSLQHFVLHSIAM-------------TSESSCTTIDGLKATKNFLQCLGWFGNTPFLFPLYGQGEISQCFCRMCAVFGGIYCLRRKVQCLVVDKESGRCNAVIDHLGQRIHAKNFIV 431
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|344278363|ref|XP_003410964.1| (PREDICTED: rab proteins geranylgeranyltransferase component A 2 [Loxodonta africana]) HSP 1 Score: 169.859 bits (429), Expect = 1.299e-40 Identity = 142/521 (27.26%), Postives = 221/521 (42.42%), Query Frame = 0
Query: 8 DGLEHQYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPTQAKLWDT--PCVLRRRWPARR-----WRAAGGIDRGDREEGEKEEGSGEGTDPPIDEDAPSKCL-----MVLLPGHD------SVSTRVIQIDENLPPRGRAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGKGNT----KTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVL 506
D L ++DV+IIGTGL E+IL+AA ++ G+ VL+ + YYGG +W SF L +W K ++ ++ + A Q + +T LR++ + A+ +D E G ++ + E S CL +V +P ++ S S I +D N +E P DG A A + G+GNT + ++ R FN+DL +L + G +I L+ S V+ Y EF+ + + I W+G + VPCS+ DVF+S L EKR LMKFL D+ QH +E E A+ Q ++L+ K+ +LQ V H++A+ E TT +GL+ LQ LG++G T FL+P+YG G++ Q F RM +V+GG Y LR + L V E+G C V+D G I ++ ++
Sbjct: 3 DSLPTEFDVVIIGTGLPESILAAASSRSGQRVLHVDSRSYYGG-NWASFSFSGLLSWLKEYQ--ENCVDGEESTAAWQGLIHETEEAITLRKKDETIQHVEVFCYASQDLDDSVEEVGALQKNPCSVASSTLTETLDSACLGEDEHLVHVPSYERPAQDTSKSDGEISLDVN-------DVKEPPEKGNDGGDRARAHAVSDADKDENKPAGEGNTDQPTRNRITYSQIVKEGRRFNIDLVSKLLYSQGLLIDLLIKSNVSRYAEFK----------NVTRILAFWEGKVEQ-------------------------VPCSRADVFNSKELTMVEKRMLMKFLTFCVDY---------EQHPDEYE---------------------AFKQCSFSEYLKTKKLTPNLQHFVLHSIAMT-------------SESSCTTIDGLKATKNFLQCLGRFGNTPFLFPLYGQGEIPQCFCRMCAVFGGIYCLRHKVHCLIVDKESGRCKAVIDHFGQRINAKYFIV 435
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|632935441|ref|XP_007890079.1| (PREDICTED: rab proteins geranylgeranyltransferase component A 1 [Callorhinchus milii]) HSP 1 Score: 169.474 bits (428), Expect = 2.674e-40 Identity = 183/792 (23.11%), Postives = 298/792 (37.63%), Query Frame = 0
Query: 15 DVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPTQAKLWD------------------TPCVLRRRWPAR-----RWRAAGGIDRGDREE---GEKEEGSGEGTDPPIDEDAPSKCLMVLLPGHDSVSTRV-----IQIDENLPPRGRAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLGQGNMPAGWRGRRRRGGVDLRLGPEGGSGGRSLVRRVVLLDCAPAALSWKTGGMGGGPGDDQAEEGARTETGTCGGVMPPGTVPGCSGDHPGHSHPAVHFYCVDPAARCSPPGTFILYLATISSSRSSEGEGGNSDETSTAAARLL-----KAATCILIDSPGEHVLWAVTY---EQPLGGLSYPEGKEACGEIPSGPPPPCASSPPSPSVAKNVLTVERIAPEFYLDSPLKQARHLFESICPGEAFL-PAEVPEGVLPFDVATTDGGD 766
+++I+GTGL EAI++AA +++G+ VL+ +K YYGG +W SF L +W + + S+ Q K+ + C + A + + A G + E + EE T P D ++P++C V L D+ S + +D+ P A + + + P F + + EE K T + ++ R FN+DL+ L + G ++ L+ S V+ Y EF+ + + G V + VPCS+ DVF+S L EKR LMKFL ++ QH +E + + + ++L+ K+ E+LQ+ + H++A++ +T EG + LQ LG+YG T FL+P+YG G++ Q F RMS+V+GGTY LR L V ETG C V+D G I CEH ++ +P + + + GS +S ++ +L TVP P+V + P++ P GT++++L SS + E D + A + + TC + VLWA+ + + S EG + I SGP P + +KQA +F+ + P E F PA PE ++ +D T GD
Sbjct: 10 ELVILGTGLQEAIIAAACSRIGQRVLHVDKRMYYGG-NWASFSFSGLLSWIE---ECNGQTSSSLETVNLQCKILEGEDTILLDQVDQSIENLEVFCYVSAEEDAEEAADVQMKQANGTSSAESENKVLNQSEESPSYKTAPSDDVESPTQCSDVQLSTKDAPSASSSTTSEMDVDKKEIPITAASDDGNEANNAEKPNIM----FATQKVK---EEMKKMTYS-----QIMKNGRKFNIDLTSKFLYSRGPLVDLLIKSNVSRYTEFKNVTRILTCQ-----------------------------GGKVEQ------VPCSRADVFASKQLTVVEKRMLMKFLTFSLEY---------EQHTDEFQ---------------------GFQDKAFSEYLKTKKLTENLQYFILHSIAMVSDTA--------------STTEGFKATQHFLQCLGRYGNTPFLFPLYGVGEIPQCFCRMSAVFGGTYCLRHSVQCLVVDRETGRCKAVIDSIGNRITCEHFIVEDSYLPQKHTKNIQYRQISRGVLITNGSVFKSDSEQISIL-----------------------------------------TVPAME-----QGRPSVRIIELCPSSMTCPQGTYLVHLTCPSSGTAKE------DFEAVVTALFVNYNETEEMTCSDEEDEKPKVLWALYFNVRDSSAIDRSAYEGLPSNVYICSGPDPALG-----------------------FEHSVKQAEAIFKQLFPEEEFCPPAPNPEEII-YDSDGTQQGD 630
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|567998057|gb|ETL48136.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567998058|gb|ETL48137.1| hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 165.236 bits (417), Expect = 1.216e-39 Identity = 113/354 (31.92%), Postives = 171/354 (48.31%), Query Frame = 0
Query: 199 EEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVS---VELETDAYLQRPLRDFLE-HSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVV--------LGQGNMPAGWRGRRRRGGVDLRLGPEGGSGGRSLV 540
EEG + T E L+ +S F++D++P ++++ ++ L++SGV YLEF + ++ +P+ +NS+ P VPCSK DVF S LL EKRQLMKFLQ VAD+G + + +NE L R+L+RPQNK S + E AYL P ++ LE H K+ LQ VV + + L P + Q++ +GL ++ ++ +G++ TAFL P+YG +L Q+F R+S+V+GG Y+LR + ET GV G ++ +HVV L N+ G RG L+ GG LV
Sbjct: 11 EEGFSDDAT---KEELVQKSSSFSIDVNPRLMLSSEQLVETLITSGVGRYLEFAAIERTYV------HFQPT----------------DNSTEPD-----TVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERSLALGRALKRPQNKASQADTDAELVAYLDNPFQELLEKHFKLSVKLQQVVVYCVGLATFPA---------SKNQISARDGLAAVYRYVASIGRFTGTAFLAPLYGISELAQSFCRLSAVYGGIYVLRAPINGFVLDNETRTLTGVRCSDGDVLRTKHVVTNGSYVDCLRLNNVSKRAHGELLRGVFVLKSSLRGGMNRIMLV 325
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|567998056|gb|ETL48135.1| (hypothetical protein L916_02226 [Phytophthora parasitica]) HSP 1 Score: 165.236 bits (417), Expect = 4.738e-39 Identity = 113/354 (31.92%), Postives = 171/354 (48.31%), Query Frame = 0
Query: 199 EEGKGNTKTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVS---VELETDAYLQRPLRDFLE-HSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVV--------LGQGNMPAGWRGRRRRGGVDLRLGPEGGSGGRSLV 540
EEG + T E L+ +S F++D++P ++++ ++ L++SGV YLEF + ++ +P+ +NS+ P VPCSK DVF S LL EKRQLMKFLQ VAD+G + + +NE L R+L+RPQNK S + E AYL P ++ LE H K+ LQ VV + + L P + Q++ +GL ++ ++ +G++ TAFL P+YG +L Q+F R+S+V+GG Y+LR + ET GV G ++ +HVV L N+ G RG L+ GG LV
Sbjct: 109 EEGFSDDAT---KEELVQKSSSFSIDVNPRLMLSSEQLVETLITSGVGRYLEFAAIERTYV------HFQPT----------------DNSTEPD-----TVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERSLALGRALKRPQNKASQADTDAELVAYLDNPFQELLEKHFKLSVKLQQVVVYCVGLATFPA---------SKNQISARDGLAAVYRYVASIGRFTGTAFLAPLYGISELAQSFCRLSAVYGGIYVLRAPINGFVLDNETRTLTGVRCSDGDVLRTKHVVTNGSYVDCLRLNNVSKRAHGELLRGVFVLKSSLRGGMNRIMLV 423
BLAST of EWM29339.1 vs. NCBI_GenBank
Match: gi|507971791|ref|XP_004690834.1| (PREDICTED: rab proteins geranylgeranyltransferase component A 2 [Condylura cristata]) HSP 1 Score: 165.236 bits (417), Expect = 5.039e-39 Identity = 137/516 (26.55%), Postives = 214/516 (41.47%), Query Frame = 0
Query: 8 DGLEHQYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDPAGSARAVAPTQAKLWDTPCVLRRRWPARRWRAAGGIDRGDREEGEKEEGSGEGTDPPIDEDAPSKCLMV--LLPGHDSVSTRVIQIDENLPPRG--RAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGK----GNT----KTCWDAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAF-----HPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNKVSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVL 506
D L ++DV++IGTGL E+IL+AA ++ G+ VL+ + YYGG +W SF L +W ++++ D G + A + L R+ + R D + +E + + P+ + SK L L S+ST + +P R + E P T S L E K GN+ + ++ SR FN+DL +L + G +I L+ S V Y EF+ V+R +AF VPCS+ DVF+S L EKR LMKFL D+ QH +E + A++Q ++L+ K+ +LQ V H++A+ + TT +GL+ LQ LG++G T FL+P+YG G++ Q F RMS+V+GG Y LR Q L V + G C ++D+ G I ++ ++
Sbjct: 12 DCLPTEFDVVVIGTGLPESILAAACSRNGQRVLHIDSKSYYGG-NWASFSFSGLLSWLDDYQQNNDVGGESTAAWQDLIHETEAAVALCRKDETIQHREVFCYVSQDMNDNIEEIDAVQNNPSPVAPSSISKPLDFASLSEETHSLSTTSYK----MPARDTPESDGEISPEVTDTEEKYCGDETCIHSDLAGDKGENKPVMEGNSDQSKRNRVTYSQIVKESRKFNIDLVSKLLYSQGLLIDLLIKSNVCHYAEFK----------------------------------------NVTRILAFREGKVEKVPCSRADVFNSKELTMVEKRMLMKFLAFCLDY---------EQHPDEYQ---------------------AFMQCSFSEYLKTRKLTPNLQHFVLHSIAM-------------TSDSSCTTIDGLKATKNFLQCLGRFGNTPFLFPLYGQGEMPQCFCRMSAVFGGIYCLRRQVQCLVVDKQAGRCTAIIDQFGQRINAKYFIV 439 The following BLAST results are available for this feature:
BLAST of EWM29339.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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