EWM29377.1, cds1315 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|585111905|gb|EWM29377.1| (Cystinosin/ERS1p repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 741.88 bits (1914), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MYESGPSYFAWLTAGWSRRDDGRGTRLEERDGCLAIVGDSRFGFGCCTITPVACSMARIFGLALVALAVSSTTRAFATGPQNVFKSTIHGGLRPRKTPMLASLCSAPHHHVLNVGKGMPVSNRPLPSSSLAAAPSSISSIVPILFRRGGVAIPAAPGKGFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRASMKDA 369 MYESGPSYFAWLTAGWSRRDDGRGTRLEERDGCLAIVGDSRFGFGCCTITPVACSMARIFGLALVALAVSSTTRAFATGPQNVFKSTIHGGLRPRKTPMLASLCSAPHHHVLNVGKGMPVSNRPLPSSSLAAAPSSISSIVPILFRRGGVAIPAAPGKGFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRASMKDA Sbjct: 1 MYESGPSYFAWLTAGWSRRDDGRGTRLEERDGCLAIVGDSRFGFGCCTITPVACSMARIFGLALVALAVSSTTRAFATGPQNVFKSTIHGGLRPRKTPMLASLCSAPHHHVLNVGKGMPVSNRPLPSSSLAAAPSSISSIVPILFRRGGVAIPAAPGKGFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRASMKDA 369
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|553190127|ref|XP_005855133.1| (mannose-p-dolichol utilization defect 1 [Nannochloropsis gaditana CCMP526] >gi|422293932|gb|EKU21232.1| mannose-p-dolichol utilization defect 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 487.649 bits (1254), Expect = 6.529e-172 Identity = 250/252 (99.21%), Postives = 250/252 (99.21%), Query Frame = 0 Query: 118 MPVSNRPLPSSSLAAAPSSISSIVPILFRRGGVAIPAAPGKGFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRASMKDA 369 MPVSNRPLPSSSLAAAPSSISSI PILFRRGGVAIPAAPGKGFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRA MKDA Sbjct: 1 MPVSNRPLPSSSLAAAPSSISSIAPILFRRGGVAIPAAPGKGFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRAPMKDA 252
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|544216519|ref|XP_005538404.1| (similar to mannose-P-dolichol utilization defect 1 protein [Cyanidioschyzon merolae strain 10D] >gi|449018966|dbj|BAM82368.1| similar to mannose-P-dolichol utilization defect 1 protein [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 164.081 bits (414), Expect = 2.480e-44 Identity = 88/200 (44.00%), Postives = 133/200 (66.50%), Query Frame = 0 Query: 163 LTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISP-LAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTL-YLLSCVAAFIFNGALVAQYYLY 360 L LLS+ G++VI GS L+K+PQ RI R +SA G+S + Y+ ET+ A S +++R FPF T+GE+ FI++QNV+I+ +S + P L +L +SP LAP ++V++ Q VSIPLLN SR+PQ+++N + ++TGEL+ +T++LQ +GN AR+FTT+V+L L YLLS + A N LV QY+ + Sbjct: 96 LGLLSQVLGWLVIIGSSLYKVPQVVRILRVRSAKGISVTTYVCETVSTACSFCYALRQRFPFDTFGESGFILIQNVMILVLMSHFDARPRRWATLAILGSITLLMGVLLSPRLAPPVVVTVAQAVSIPLLNLSRIPQIVMNAQLRTTGELSITTMLLQLLGNAARLFTTLVRLDGNLPYLLSAIVALALNSILVYQYFRF 295
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|545709189|ref|XP_005706905.1| (lysosomal cysteine transporter, LCT family [Galdieria sulphuraria] >gi|452823374|gb|EME30385.1| lysosomal cysteine transporter, LCT family [Galdieria sulphuraria]) HSP 1 Score: 159.458 bits (402), Expect = 7.256e-43 Identity = 88/216 (40.74%), Postives = 128/216 (59.26%), Query Frame = 0 Query: 146 RRGGVAIPAAPGKGFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYR 361 ++ +++P+ + L S GYVVI S +K+PQ ARI KKS+ G+S SMY+LE+IGI SL + I+ FP+ T+ E++ I +QN++I + Y++ L L L A + P+ + +LQ S PL+N S++PQ+L N RN+STGEL+P TL Q GNVAR+FTT+VQL+N +L S + I N L QY YR Sbjct: 43 QQSSISLPSPDVVRCNHLKSTSSLIGYVVIFCSTFYKVPQIARIITKKSSKGISLSMYVLESIGIYFSLCYCIQAKFPWETFAESICIFVQNIIITLFLYKYTERKDGRNRNLVYALIPLMGASLLCIRLPIHWLQLLQVCSSPLMNISKIPQILRNERNQSTGELSPITLSFQLAGNVARVFTTIVQLRNRWFLTSISISLILNAILGLQYIRYR 258
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|983147061|gb|KWU45024.1| (mannose-P-dolichol utilization defect 1 protein, partial [Rhodotorula sp. JG-1b]) HSP 1 Score: 139.043 bits (349), Expect = 1.771e-35 Identity = 84/198 (42.42%), Postives = 124/198 (62.63%), Query Frame = 0 Query: 166 LSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETI--GIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPS-PPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLY 360 LS+ G ++AG + KLPQ + R SA GLS S YIL+T+ GI S+A+++RN FPFSTYGE F++ QN V++ I+ YS P+ P ++ L LL SL +A L P +S LQT++IP+ S+VPQ++ NY+ KSTG+L+ +I G +AR+FTTM + ++ L L + A + NG + AQ +Y Sbjct: 44 LSKVLGLGMVAGGAILKLPQILTVVRSGSARGLSLSSYILDTVATGITASVAYNVRNGFPFSTYGEMGFLLAQNAVLIVLITSYSARPTLPRLVPLVALLGSLAYALASPSLVPASTLSFLQTLTIPISLSSKVPQIVENYKAKSTGQLSAFLVINSLAGCLARVFTTMSETKDPLLLWNFALAALLNGVIFAQMIVY 241
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|1069957385|ref|XP_018289466.1| (hypothetical protein PHYBLDRAFT_75231 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026586844|gb|OAD71426.1| hypothetical protein PHYBLDRAFT_75231 [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 135.576 bits (340), Expect = 4.992e-34 Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = 0 Query: 182 KLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLY 360 K+PQ I R KSA GLS S Y+LET A++LA+++R PFST+GE FI LQN+VI I LYS + ++ + L+ S+F+ T L P ++++L +IPL S+VPQ+ N++NKSTG+L+ T+I G+ AR+FTTM +L + L L V A + N LV Q +LY Sbjct: 55 KIPQIMTIVRNKSAQGLSLSSYLLETFSYAITLAYNLRQGNPFSTFGEIFFISLQNIVITLLILLYSGKREALVMTFTSLI-SIFYCLTSEKLVPASIMAVLYAATIPLSLASKVPQISANFKNKSTGQLSVFTVINYFAGSTARVFTTMTELDDPLMLTGTVLASVLNAVLVIQVFLY 232
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|544217780|ref|XP_005539034.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449019596|dbj|BAM82998.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 132.88 bits (333), Expect = 1.139e-32 Identity = 78/199 (39.20%), Postives = 123/199 (61.81%), Query Frame = 0 Query: 166 LSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSP-PILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDR 363 L+R GY V+AG+ L KLPQ RI + +SAAG+S + Y++E+ G A +LA+ R +PFSTYG+ V + +QN +IMA I ++++ P +L LS + + A P+ ++ L ++++ ++ SR+PQ+L N R K TG L+ +T + G AR+FTTM Q+QN L+ +A+ NG LVAQ +YR + Sbjct: 54 LARVLGYGVVAGAALVKLPQLLRILQNRSAAGISVATYLVESFGYAYNLAYHYRAGYPFSTYGDFVLLGVQNCLIMALIFYFNNQWFPLGLLTLSSYITATVVASWSQRAVPLAVLERLCSLNLAIVIGSRLPQILANARRKHTGSLSLATCLGLFGGATARVFTTMQQVQNHTILVGYLASAFLNGILVAQILMYRKQ 252
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|1022850618|ref|XP_016272679.1| (mannose-p-dolichol utilization defect 1 protein [Rhodotorula toruloides NP11] >gi|472583944|gb|EMS21560.1| mannose-p-dolichol utilization defect 1 protein [Rhodotorula toruloides NP11] >gi|647400417|emb|CDR45849.1| RHTO0S11e05600g1_1 [Rhodotorula toruloides]) HSP 1 Score: 134.035 bits (336), Expect = 1.426e-32 Identity = 73/196 (37.24%), Postives = 121/196 (61.73%), Query Frame = 0 Query: 166 LSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILA-LSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLY 360 LS+ G ++AG + KLPQ + R SA GLS S Y+L+T+ +++A+++RN FP+ST+GE F++ QN V++ I+ YS P+ P LA L +L ++L +A + + L P +S LQT++IP+ S+VPQ+L N+RN+STG+L+ + G +AR+FTT + + L + + + N + Q +Y Sbjct: 55 LSKGLGLAMVAGGAILKLPQIITVVRSGSARGLSLSSYVLDTVATGITVAYNVRNGFPYSTWGEMAFLLAQNAVLIVLITSYSARPTLPRLAPLVVLFSTLAYALSNTSLVPSSTLSFLQTLTIPISLSSKVPQILSNFRNRSTGQLSAFLVFNSLAGCLARVFTTRTETSDPLLFWGFLLSALLNAVIAIQMLVY 250
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|342319849|gb|EGU11794.1| (MPU1p [Rhodotorula toruloides ATCC 204091]) HSP 1 Score: 138.272 bits (347), Expect = 3.384e-32 Identity = 74/196 (37.76%), Postives = 121/196 (61.73%), Query Frame = 0 Query: 166 LSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILA-LSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLY 360 LS+ G ++AG + KLPQ + R+ SA GLS S Y+L+T+ +++A+++RN FP+ST+GE F++ QN V++ I+ YS P+ P LA L +L + L +A + + L P +S LQT++IP+ S+VPQ+L N+RN+STG+L+ + G +AR+FTT + + L + + NG + Q +Y Sbjct: 55 LSKGLGLAMVAGGAILKLPQIITVVRRGSARGLSLSSYVLDTVATGITVAYNVRNGFPYSTWGEMAFLLAQNAVLIVLITSYSARPTLPRLAPLVVLFSKLAYALSNTSLVPSSTLSFLQTLTIPISLSSKVPQILSNFRNRSTGQLSAFLVFNSLAGCLARVFTTRTETNDPLLFWGFLLGALLNGVIAIQMLVY 250
BLAST of EWM29377.1 vs. NCBI_GenBank
Match: gi|672818689|gb|KFH63589.1| (mannose-P-dolichol utilization defect 1 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 128.642 bits (322), Expect = 4.305e-31 Identity = 77/215 (35.81%), Postives = 119/215 (55.35%), Query Frame = 0 Query: 166 LSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISP---------------LAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRAS 365 LS+ G+ ++ G + K+PQ +I R +SA GLS S Y+LET +S+A+++R P STYGE F+ +QN+VI+ + Y AL L A LF + +S L P +++ LQ +IP+ FSR+PQ++ NYRN STG+LA T+ G++AR++TT+V++ + + L V + NG L Q +Y D S Sbjct: 39 LSKGLGFGIVLGGAIVKIPQIIKIVRARSAKGLSLSSYLLETFASVISVAYNVRQMNPISTYGEAFFVAVQNLVILGLMLHYRGRTRS---ALGTLFAFLFLGFILSRNTSEMQADGSIITTGLIPHGILAFLQATTIPISLFSRIPQIIENYRNGSTGQLAAFTVFNYCAGSLARVYTTLVEVDDVIILSGAVFNALLNGILALQMAMYWDSWS 250 The following BLAST results are available for this feature:
BLAST of EWM29377.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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