EWM29381.1, cds1311 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|585111909|gb|EWM29381.1| (Alpha-mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 1019.61 bits (2635), Expect = 0.000e+0 Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0
Query: 1 MSTFGTRAVGNAFSLKWVIRGVAGLIIINIFLQTGFFLPGPILSSTGRHDAVCTPFDPVAAPFSLHLLGSAFNFTPATPMATPDALFHGKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWRYILQGMCLDVRQVARALNGRELDSSCVVMDKRRNADALAVSLALNGPCQALTYATLWGDKDTWALAMFYVGKTVSVRECEPGYLLKARPSGEGGGEGGGEGGAEEGARGNTDTLSSPLQVARKVNGHVQFLKDKSSQSPPGLVPLHHNNQLLDLRNYHRHKNGIYMDVFSHLGDVLMPGTRRRDCRAFPARDLLPLSPVMHEAYEAVALGLEENKIDHCVCRDDWISCEADIARLRHKYWVLRLIDWWAPREAEGGVRE 497
MSTFGTRAVGNAFSLKWVIRGVAGLIIINIFLQTGFFLPGPILSSTGRHDAVCTPFDPVAAPFSLHLLGSAFNFTPATPMATPDALFHGKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWRYILQGMCLDVRQVARALNGRELDSSCVVMDKRRNADALAVSLALNGPCQALTYATLWGDKDTWALAMFYVGKTVSVRECEPGYLLKARPSGEGGGEGGGEGGAEEGARGNTDTLSSPLQVARKVNGHVQFLKDKSSQSPPGLVPLHHNNQLLDLRNYHRHKNGIYMDVFSHLGDVLMPGTRRRDCRAFPARDLLPLSPVMHEAYEAVALGLEENKIDHCVCRDDWISCEADIARLRHKYWVLRLIDWWAPREAEGGVRE
Sbjct: 1 MSTFGTRAVGNAFSLKWVIRGVAGLIIINIFLQTGFFLPGPILSSTGRHDAVCTPFDPVAAPFSLHLLGSAFNFTPATPMATPDALFHGKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWRYILQGMCLDVRQVARALNGRELDSSCVVMDKRRNADALAVSLALNGPCQALTYATLWGDKDTWALAMFYVGKTVSVRECEPGYLLKARPSGEGGGEGGGEGGAEEGARGNTDTLSSPLQVARKVNGHVQFLKDKSSQSPPGLVPLHHNNQLLDLRNYHRHKNGIYMDVFSHLGDVLMPGTRRRDCRAFPARDLLPLSPVMHEAYEAVALGLEENKIDHCVCRDDWISCEADIARLRHKYWVLRLIDWWAPREAEGGVRE 497
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|585112293|gb|EWM29715.1| (alpha- -mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 213.386 bits (542), Expect = 1.149e-58 Identity = 156/415 (37.59%), Postives = 208/415 (50.12%), Query Frame = 0
Query: 74 FTPATPMATPDALFH-GKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVR---LLDL-------ESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWRYILQGMCLDVRQVARALNGRELDSSCVVMDKRRNADALAVSLALNGPCQALTYATLWGDKDTWALAMFYVGKTVSVRECEPGYLLK-ARPSGEGGGEGGGEGGAEEGARGNTDTLSSPLQVARKVNGHVQFLKDKSSQSPPGLVPLHHNNQLLDLRNY----HRHKNGIYMDVFSHLGDVLMPGTRRRDCRAFPARDLLPLSPVMHEAYEAVALGLEE-NKIDHCVCRDDWISCEADIA 471
F PA ++ P A F G+GIVI ASG I+ QA GA+VT+ +LR VL +LPIEI++ G E F + + L DVR LLD+ +S L +LH R LR YAAK YA+ A F+E LLFDAG IPF FFGL S+ HG +F DY +D W ++ C D+ ++ L G E DSSCV++ K R DAL V++A+NGP Q TYA L GDKDTWALA + S+ + PGY ++ ARP T S+ A+ + G VQF +D ++ G+VPL+ NNQLL++ Y HR G++ D G RA A LL P + +AV L D C+C+ W C +A
Sbjct: 220 FVPA--VSCPSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRR----------LRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGFVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMAQTTPGYFMREARPE-------------------LTLLDSAYAGWAQPIRGQVQFRRDP--EAVGGVVPLYVNNQLLNMTEYPGMRHRLAFGLWEDY----------GYPFCGWRAVNA--LLRPPPEVFNVMDAVGEALHTVGAPDECLCK--WFRCRFPVA 587
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|1028571815|gb|OAJ40119.1| (hypothetical protein, variant 5 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 88.5817 bits (218), Expect = 2.672e-15 Identity = 73/237 (30.80%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 84 DALFH--GKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWR-YILQGMCLDV------------RQVARALNGRELDSSCVVMDKRRNADALAVSLALN-GPCQALTYATLWGDKDTWALA 304
DALF+ G+GIVI ++ A A T +LR ++ LPIEI Y G ++ K L LP+VR++D+ S L GL+ E +G+ K +A+ A F + +L DA A+ F P F +P Y G +F D R L M +D+ ++ R + E+DS VV +K + A+ ++ LN P + Y+ WGDK+T+ LA
Sbjct: 82 DALFNSSGRGIVITTG---SKYALVAKHTITMLR-LIKSTLPIEIMYCGADDLGTNE-FKMLSMLPNVRVVDMRSVL------GLKRCE--------KGWENKPFAVLASRFNQVILMDADALFFQPPEVLFEIPRYKETGTLLFRDRTLPFGTYGRGQNLVNMLMDIAKPFKNQLLYSENRLMRHMTSDEIDSGVVVWNKSKAMPAILLTCLLNSAPFKNHIYSNSWGDKETYWLA 299
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|1028571811|gb|OAJ40115.1| (hypothetical protein, variant 1 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 88.9669 bits (219), Expect = 3.616e-15 Identity = 73/237 (30.80%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 84 DALFH--GKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWR-YILQGMCLDV------------RQVARALNGRELDSSCVVMDKRRNADALAVSLALN-GPCQALTYATLWGDKDTWALA 304
DALF+ G+GIVI ++ A A T +LR ++ LPIEI Y G ++ K L LP+VR++D+ S L GL+ E +G+ K +A+ A F + +L DA A+ F P F +P Y G +F D R L M +D+ ++ R + E+DS VV +K + A+ ++ LN P + Y+ WGDK+T+ LA
Sbjct: 171 DALFNSSGRGIVITTG---SKYALVAKHTITMLR-LIKSTLPIEIMYCGADDLGTNE-FKMLSMLPNVRVVDMRSVL------GLKRCE--------KGWENKPFAVLASRFNQVILMDADALFFQPPEVLFEIPRYKETGTLLFRDRTLPFGTYGRGQNLVNMLMDIAKPFKNQLLYSENRLMRHMTSDEIDSGVVVWNKSKAMPAILLTCLLNSAPFKNHIYSNSWGDKETYWLA 388
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|1028571812|gb|OAJ40116.1| (hypothetical protein, variant 2 [Batrachochytrium dendrobatidis JEL423] >gi|1028571813|gb|OAJ40117.1| hypothetical protein, variant 3 [Batrachochytrium dendrobatidis JEL423] >gi|1028571814|gb|OAJ40118.1| hypothetical protein, variant 4 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 88.5817 bits (218), Expect = 3.991e-15 Identity = 73/237 (30.80%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 84 DALFH--GKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWR-YILQGMCLDV------------RQVARALNGRELDSSCVVMDKRRNADALAVSLALN-GPCQALTYATLWGDKDTWALA 304
DALF+ G+GIVI ++ A A T +LR ++ LPIEI Y G ++ K L LP+VR++D+ S L GL+ E +G+ K +A+ A F + +L DA A+ F P F +P Y G +F D R L M +D+ ++ R + E+DS VV +K + A+ ++ LN P + Y+ WGDK+T+ LA
Sbjct: 145 DALFNSSGRGIVITTG---SKYALVAKHTITMLR-LIKSTLPIEIMYCGADDLGTNE-FKMLSMLPNVRVVDMRSVL------GLKRCE--------KGWENKPFAVLASRFNQVILMDADALFFQPPEVLFEIPRYKETGTLLFRDRTLPFGTYGRGQNLVNMLMDIAKPFKNQLLYSENRLMRHMTSDEIDSGVVVWNKSKAMPAILLTCLLNSAPFKNHIYSNSWGDKETYWLA 362
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|1028571810|gb|OAJ40114.1| (hypothetical protein BDEG_23887 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 88.5817 bits (218), Expect = 4.774e-15 Identity = 73/237 (30.80%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 84 DALFH--GKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWR-YILQGMCLDV------------RQVARALNGRELDSSCVVMDKRRNADALAVSLALN-GPCQALTYATLWGDKDTWALA 304
DALF+ G+GIVI ++ A A T +LR ++ LPIEI Y G ++ K L LP+VR++D+ S L GL+ E +G+ K +A+ A F + +L DA A+ F P F +P Y G +F D R L M +D+ ++ R + E+DS VV +K + A+ ++ LN P + Y+ WGDK+T+ LA
Sbjct: 203 DALFNSSGRGIVITTG---SKYALVAKHTITMLR-LIKSTLPIEIMYCGADDLGTNE-FKMLSMLPNVRVVDMRSVL------GLKRCE--------KGWENKPFAVLASRFNQVILMDADALFFQPPEVLFEIPRYKETGTLLFRDRTLPFGTYGRGQNLVNMLMDIAKPFKNQLLYSENRLMRHMTSDEIDSGVVVWNKSKAMPAILLTCLLNSAPFKNHIYSNSWGDKETYWLA 420
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|575476412|ref|XP_006677500.1| (hypothetical protein BATDEDRAFT_86743 [Batrachochytrium dendrobatidis JAM81] >gi|328771665|gb|EGF81704.1| hypothetical protein BATDEDRAFT_86743 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 86.6557 bits (213), Expect = 1.038e-14 Identity = 72/237 (30.38%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 84 DALFH--GKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWR-YILQGMCLDV------------RQVARALNGRELDSSCVVMDKRRNADALAVSLALN-GPCQALTYATLWGDKDTWALA 304
+ALF+ G+GIVI ++ A A T +LR ++ LPIEI Y G ++ K L LP+VR++D+ S L GL+ E +G+ K +A+ A F + +L DA A+ F P F +P Y G +F D R L M +D+ ++ R + E+DS VV +K + A+ ++ LN P + Y+ WGDK+T+ LA
Sbjct: 82 EALFNSSGRGIVITTG---SKYALVAKHTITMLR-LIKSTLPIEIMYCGADDLGTNE-FKMLSMLPNVRVVDMRSVL------GLKRCE--------KGWENKPFAVLASRFNQVILIDADALFFQPPEVLFEIPRYKETGTLLFRDRTLPFGTYGRGQNLVNMLMDIAKPFKNQLLYSENRLMRHMTSDEIDSGVVVWNKSKAMPAILLTCLLNSAPFKNHIYSNSWGDKETYWLA 299
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|1183343617|gb|ORX72521.1| (hypothetical protein BCR32DRAFT_211117 [Anaeromyces robustus]) HSP 1 Score: 78.9518 bits (193), Expect = 2.675e-12 Identity = 63/227 (27.75%), Postives = 103/227 (45.37%), Query Frame = 0
Query: 89 GKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEE-AFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYV----SIDAAQW-RYILQGMCLDVRQVA--RALNGRELDSSCVVMDKRRNADALAVSLALNGPC--QALTYATLWGDKDTWALAM 305
G+GIV+ + A+ A ++R VL+ DLPIEIFY+G + +FQ ++ L DV L D+ + N S+ + G+A K +A+ A F+E +L DA + F Y + G F D D +QW + ++ + +++ L E+DSS VV+ K +N L LN Q + Y ++GDK+T+ +
Sbjct: 27 GRGIVMCTGNEHFKYASSA---IDIIRHVLNSDLPIEIFYNGDSDLSFQNRIM--LLDYKDVYLTDISTYFDN-------------SIVNISGWAIKPFAILASRFEEVILMDADVVYLRDPIELFEDIGYQKTGTLFFRDRTLEPGPHDGSQWLKSWMKNPLPETKKLRYWNELTQHEMDSSTVVIHKTKNILGLLAVCKLNEKKIRQEVIYKKVYGDKETFWMGF 235
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|1028568140|gb|OAJ36444.1| (hypothetical protein BDEG_20617 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 79.337 bits (194), Expect = 3.096e-12 Identity = 66/234 (28.21%), Postives = 102/234 (43.59%), Query Frame = 0
Query: 89 GKGIVIAASGAIARQAAGAYVTALVLRTVLHE---DLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWRY--------------ILQGMCLDVRQVARALNGRELDSSCVVMDKRRNADALAVSLALN-GPCQALTYATLWGDKDTWALA 304
G+GI I A + A ++ T+LHE LPIEIFY G ++ L+ A P+V+L D++ L G+ Q RGY K +A+ A SF+E ++ DA + F P F Y G +F D +++ W + L + +V R +E+D+ VV DK R A+ ++ LN P + Y GDK+T+ L+
Sbjct: 134 GRGIAITTGSKYA-------LVAKLVVTMLHEIGSTLPIEIFYCGKDDLGTNE-LEMFSAFPNVKLADMQDIL------GID--------QCSRGYENKPFAVLASSFREVIMIDADVLFFQPPEVIFESAGYKEMGAVIFRDR-TLEYGTWNHGPSLKRLVEEIAHPYLSNLIYPEARVMRKKTAQEIDAGVVVWDKMRTMPAILLTCLLNSSPYKHWIYDRTLGDKETFWLS 344
BLAST of EWM29381.1 vs. NCBI_GenBank
Match: gi|1071465216|gb|OEO28525.1| (hypothetical protein VW23_004510 [Devosia insulae DS-56]) HSP 1 Score: 79.337 bits (194), Expect = 3.745e-12 Identity = 82/300 (27.33%), Postives = 137/300 (45.67%), Query Frame = 0
Query: 88 HGKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVRLLDLESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWRYILQGMCLDVRQVARALNGRELDSSCVVMDKRRNADALAVSLALNGPCQALTYATLWGDKDTWALAMFYVGKTVSV--------------RECEPGYLLKARPSGEGGGEGGGEGGAEEGARGNTDTLSSPLQVARKVNGHVQFLKDKS 373
+G+G+VI A GA R AYV +LR L +LP+E++Y G E P + AL VRL+D ++ A +R G+ K++A+ SF EALL DA +P + F P Y G + D + + + L G+ + RA++ L+S +++D+RR+A AL ++ LN L Y ++GDKDT+ A +G + ++ R+ + L + R + + + GGE G + L++ ++ K +GH D+S
Sbjct: 29 NGRGLVIVAGGA--RIFTNAYVLVHMLRHALKSELPVELWYFGQAEI--SPAMAALLEPLGVRLVDATPVIAATGA-NIRD-----------GWQLKSFALLHSSFAEALLLDADQVPVSDPAACFDWPEYGAAGAVFWPDIIDLRNDNAIWPLLGL-----EARRAVS---LESGQLLVDRRRHAAALWAAVRLNEAADDL-YRLIYGDKDTYLCAWEMLGASYALVPQRPYVDEFMLVQRDFDGNALFQHRTNAK--WQYGGEQRKLFGFQHEAACLAAMAELETKWSGHAFTAPDRS 301 The following BLAST results are available for this feature:
BLAST of EWM29381.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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