EWM29373.1, cds1307 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|553185315|ref|XP_005854232.1| (peptidyl-prolyl cis-trans isomerase fkbp2-like protein [Nannochloropsis gaditana CCMP526] >gi|422294823|gb|EKU22123.1| peptidyl-prolyl cis-trans isomerase fkbp2-like protein [Nannochloropsis gaditana CCMP526] >gi|585111901|gb|EWM29373.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Nannochloropsis gaditana]) HSP 1 Score: 303.523 bits (776), Expect = 2.397e-104 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query: 1 MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDKGKEF 149
MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDKGKEF
Sbjct: 1 MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDKGKEF 149
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|698808804|ref|XP_009837431.1| (FK506-binding protein 2B [Aphanomyces astaci] >gi|574107715|gb|ETV73226.1| FK506-binding protein 2B [Aphanomyces astaci]) HSP 1 Score: 191.43 bits (485), Expect = 4.043e-60 Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 0
Query: 27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDK 145
DL + KLRVGVKFRP+SC KS+ GD LSMHYTGTL KDGSKFDSS+DRN PFEFTLG GQVI+GWD GLL MC+GEKRRLTIPS LGYGDRG+ KIPGGATLVF+VELL I N+ K
Sbjct: 19 DLAADAKLRVGVKFRPESCSRKSESGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGSGQVIRGWDQGLLGMCIGEKRRLTIPSGLGYGDRGSPPKIPGGATLVFDVELLDIKNAPK 137
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|953501716|emb|CEG37165.1| (RxLR-like protein [Plasmopara halstedii]) HSP 1 Score: 190.66 bits (483), Expect = 8.321e-60 Identity = 91/138 (65.94%), Postives = 106/138 (76.81%), Query Frame = 0
Query: 7 FLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSD 144
FL + + + AK+ DL P+ +LR+GVK RPDSC +KS+ GD LSMHYTGTL KDGSKFDSSLDRN PFEF LG G VIKGWD GL++MC+GEKRRLTIPS LGYGD G+ KIPG ATLVF+VELL I + D
Sbjct: 6 FLAAAVMATMQVGAKE----DLPPDAQLRIGVKHRPDSCTVKSQPGDTLSMHYTGTLRKDGSKFDSSLDRNVPFEFKLGAGHVIKGWDRGLVDMCIGEKRRLTIPSDLGYGDHGSPPKIPGKATLVFDVELLDIKHED 139
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|695383107|ref|XP_009517606.1| (hypothetical protein PHYSODRAFT_353748 [Phytophthora sojae] >gi|348690517|gb|EGZ30331.1| hypothetical protein PHYSODRAFT_353748 [Phytophthora sojae]) HSP 1 Score: 187.193 bits (474), Expect = 2.152e-58 Identity = 90/120 (75.00%), Postives = 104/120 (86.67%), Query Frame = 0
Query: 27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGIN-NSDK 145
DL P+ +LR+GVK+RP+ C KS+ GD+LSMHYTGTL KDGSKFDSSLDRNQPFEF LG G+VIKGWD GL+NMCVGEKRRLTIPS++GYGDRG+ KIPG ATLVF+VELL I NSD+
Sbjct: 22 DLPPDAQLRIGVKYRPEECPKKSQLGDVLSMHYTGTLRKDGSKFDSSLDRNQPFEFPLGAGRVIKGWDQGLVNMCVGEKRRLTIPSNMGYGDRGSPPKIPGKATLVFDVELLEIKGNSDE 141
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|813108504|ref|XP_012194420.1| (hypothetical protein SPRG_00814 [Saprolegnia parasitica CBS 223.65] >gi|813219730|ref|XP_012211242.1| hypothetical protein SPRG_16574 [Saprolegnia parasitica CBS 223.65] >gi|641523084|gb|KDO18050.1| hypothetical protein SPRG_16574 [Saprolegnia parasitica CBS 223.65] >gi|641540990|gb|KDO34753.1| hypothetical protein SPRG_00814 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 186.808 bits (473), Expect = 2.202e-58 Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 0
Query: 27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
DL P LR+GVK+RP+SCD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MCVGEKRRLTIPS +GYGD G+ IPG ATLVF+VELL I N
Sbjct: 20 DLPPTAPLRIGVKYRPESCDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAIKN 135
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|673044685|ref|XP_008876303.1| (hypothetical protein H310_11399 [Aphanomyces invadans] >gi|574468110|gb|ETV95130.1| hypothetical protein H310_11399 [Aphanomyces invadans]) HSP 1 Score: 186.808 bits (473), Expect = 2.484e-58 Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 0
Query: 27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDK 145
DL ++KLRVGVK+RP+ C KS+ GD LSMHYTGTL KDGSKFDSS+DRN PFEFTLG GQVI+GWD GL+ MC+GEKRRLTIPS LGYGDRG+ KIPGGATLVF+VELL I N+ K
Sbjct: 19 DLPADDKLRVGVKYRPEFCPRKSESGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGAGQVIRGWDQGLIGMCIGEKRRLTIPSGLGYGDRGSPPKIPGGATLVFDVELLEIKNAPK 137
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|669139310|ref|XP_008605223.1| (FK506-binding protein 2 [Saprolegnia diclina VS20] >gi|530743267|gb|EQC41509.1| FK506-binding protein 2 [Saprolegnia diclina VS20]) HSP 1 Score: 186.422 bits (472), Expect = 2.993e-58 Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 0
Query: 27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
DL P LR+GVK+RP+SCD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MCVGEKRRLTIPS +GYGD G+ IPG ATLVF+VELL I N
Sbjct: 20 DLAPTAPLRIGVKYRPESCDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAIKN 135
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|1173940493|gb|OQR89893.1| (hypothetical protein THRCLA_12400 [Thraustotheca clavata]) HSP 1 Score: 185.267 bits (469), Expect = 9.353e-58 Identity = 86/116 (74.14%), Postives = 97/116 (83.62%), Query Frame = 0
Query: 27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
DL P + LR+GVK+RP+ CD KS+ GD LSMHYTGTL KDG+KFDSS DRNQPFEFTLG GQVIKGWD GL+ MC+GEKRRLTIPS +GYGD G+ KIPG ATLVF+VELL I N
Sbjct: 19 DLPPTDPLRIGVKYRPEPCDRKSQSGDHLSMHYTGTLRKDGTKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCIGEKRRLTIPSGMGYGDHGSPPKIPGKATLVFDVELLEIKN 134
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|667483155|gb|AIG56153.1| (secreted protein [Achlya hypogyna] >gi|1173950559|gb|OQR98514.1| hypothetical protein ACHHYP_08440 [Achlya hypogyna]) HSP 1 Score: 185.267 bits (469), Expect = 1.078e-57 Identity = 87/116 (75.00%), Postives = 95/116 (81.90%), Query Frame = 0
Query: 27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
DL P LR+GVK+RP+ CD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MCVGEKRRLTIPS +GYGD G+ IPG ATLVF+VELL I N
Sbjct: 20 DLPPTAPLRIGVKYRPEECDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAIKN 135
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|1024102440|gb|KZV93699.1| (hypothetical protein EXIGLDRAFT_835522 [Exidia glandulosa HHB12029]) HSP 1 Score: 184.496 bits (467), Expect = 1.968e-57 Identity = 92/142 (64.79%), Postives = 106/142 (74.65%), Query Frame = 0
Query: 1 MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
M+R L F ++ + V A+ +EKL+VGVK +P C IKS+KGD LSMHYTGTL DGSKFDSSLDRN PF+FTLG GQVIKGWD GLL+MC+GEKR+L IP SLGYG GAG KIPGGATL+FEVELL I N
Sbjct: 1 MVRSLVFGVVALLAVFVAA-----------DEKLQVGVKHKPADCPIKSQKGDKLSMHYTGTLAADGSKFDSSLDRNSPFDFTLGAGQVIKGWDQGLLDMCIGEKRKLKIPPSLGYGANGAGGKIPGGATLIFEVELLDILN 131 The following BLAST results are available for this feature:
BLAST of EWM29373.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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