EWM29373.1, cds1307 (CDS) Nannochloropsis gaditana

Overview
NameEWM29373.1
Unique Namecds1307
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:297467..297568 +
Alignment locationCM002457.1:297640..297801 +
Alignment locationCM002457.1:297891..297927 +
Alignment locationCM002457.1:298071..298132 +
Alignment locationCM002457.1:298333..298419 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29373.1
Productpeptidyl-prolyl cis-trans isomerase, FKBP-type
Orig transcript idgnl|cribi|Naga_100028g27.3309.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:297467..297568 +
CM002457.1supercontigCM002457.1:297640..297801 +
CM002457.1supercontigCM002457.1:297891..297927 +
CM002457.1supercontigCM002457.1:298071..298132 +
CM002457.1supercontigCM002457.1:298333..298419 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
Homology
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|553185315|ref|XP_005854232.1| (peptidyl-prolyl cis-trans isomerase fkbp2-like protein [Nannochloropsis gaditana CCMP526] >gi|422294823|gb|EKU22123.1| peptidyl-prolyl cis-trans isomerase fkbp2-like protein [Nannochloropsis gaditana CCMP526] >gi|585111901|gb|EWM29373.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Nannochloropsis gaditana])

HSP 1 Score: 303.523 bits (776), Expect = 2.397e-104
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query:    1 MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDKGKEF 149
            MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDKGKEF
Sbjct:    1 MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDKGKEF 149          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|698808804|ref|XP_009837431.1| (FK506-binding protein 2B [Aphanomyces astaci] >gi|574107715|gb|ETV73226.1| FK506-binding protein 2B [Aphanomyces astaci])

HSP 1 Score: 191.43 bits (485), Expect = 4.043e-60
Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 0
Query:   27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDK 145
            DL  + KLRVGVKFRP+SC  KS+ GD LSMHYTGTL KDGSKFDSS+DRN PFEFTLG GQVI+GWD GLL MC+GEKRRLTIPS LGYGDRG+  KIPGGATLVF+VELL I N+ K
Sbjct:   19 DLAADAKLRVGVKFRPESCSRKSESGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGSGQVIRGWDQGLLGMCIGEKRRLTIPSGLGYGDRGSPPKIPGGATLVFDVELLDIKNAPK 137          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|953501716|emb|CEG37165.1| (RxLR-like protein [Plasmopara halstedii])

HSP 1 Score: 190.66 bits (483), Expect = 8.321e-60
Identity = 91/138 (65.94%), Postives = 106/138 (76.81%), Query Frame = 0
Query:    7 FLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSD 144
            FL  + +  +   AK+    DL P+ +LR+GVK RPDSC +KS+ GD LSMHYTGTL KDGSKFDSSLDRN PFEF LG G VIKGWD GL++MC+GEKRRLTIPS LGYGD G+  KIPG ATLVF+VELL I + D
Sbjct:    6 FLAAAVMATMQVGAKE----DLPPDAQLRIGVKHRPDSCTVKSQPGDTLSMHYTGTLRKDGSKFDSSLDRNVPFEFKLGAGHVIKGWDRGLVDMCIGEKRRLTIPSDLGYGDHGSPPKIPGKATLVFDVELLDIKHED 139          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|695383107|ref|XP_009517606.1| (hypothetical protein PHYSODRAFT_353748 [Phytophthora sojae] >gi|348690517|gb|EGZ30331.1| hypothetical protein PHYSODRAFT_353748 [Phytophthora sojae])

HSP 1 Score: 187.193 bits (474), Expect = 2.152e-58
Identity = 90/120 (75.00%), Postives = 104/120 (86.67%), Query Frame = 0
Query:   27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGIN-NSDK 145
            DL P+ +LR+GVK+RP+ C  KS+ GD+LSMHYTGTL KDGSKFDSSLDRNQPFEF LG G+VIKGWD GL+NMCVGEKRRLTIPS++GYGDRG+  KIPG ATLVF+VELL I  NSD+
Sbjct:   22 DLPPDAQLRIGVKYRPEECPKKSQLGDVLSMHYTGTLRKDGSKFDSSLDRNQPFEFPLGAGRVIKGWDQGLVNMCVGEKRRLTIPSNMGYGDRGSPPKIPGKATLVFDVELLEIKGNSDE 141          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|813108504|ref|XP_012194420.1| (hypothetical protein SPRG_00814 [Saprolegnia parasitica CBS 223.65] >gi|813219730|ref|XP_012211242.1| hypothetical protein SPRG_16574 [Saprolegnia parasitica CBS 223.65] >gi|641523084|gb|KDO18050.1| hypothetical protein SPRG_16574 [Saprolegnia parasitica CBS 223.65] >gi|641540990|gb|KDO34753.1| hypothetical protein SPRG_00814 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 186.808 bits (473), Expect = 2.202e-58
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 0
Query:   27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
            DL P   LR+GVK+RP+SCD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MCVGEKRRLTIPS +GYGD G+   IPG ATLVF+VELL I N
Sbjct:   20 DLPPTAPLRIGVKYRPESCDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAIKN 135          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|673044685|ref|XP_008876303.1| (hypothetical protein H310_11399 [Aphanomyces invadans] >gi|574468110|gb|ETV95130.1| hypothetical protein H310_11399 [Aphanomyces invadans])

HSP 1 Score: 186.808 bits (473), Expect = 2.484e-58
Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 0
Query:   27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDK 145
            DL  ++KLRVGVK+RP+ C  KS+ GD LSMHYTGTL KDGSKFDSS+DRN PFEFTLG GQVI+GWD GL+ MC+GEKRRLTIPS LGYGDRG+  KIPGGATLVF+VELL I N+ K
Sbjct:   19 DLPADDKLRVGVKYRPEFCPRKSESGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGAGQVIRGWDQGLIGMCIGEKRRLTIPSGLGYGDRGSPPKIPGGATLVFDVELLEIKNAPK 137          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|669139310|ref|XP_008605223.1| (FK506-binding protein 2 [Saprolegnia diclina VS20] >gi|530743267|gb|EQC41509.1| FK506-binding protein 2 [Saprolegnia diclina VS20])

HSP 1 Score: 186.422 bits (472), Expect = 2.993e-58
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 0
Query:   27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
            DL P   LR+GVK+RP+SCD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MCVGEKRRLTIPS +GYGD G+   IPG ATLVF+VELL I N
Sbjct:   20 DLAPTAPLRIGVKYRPESCDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAIKN 135          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|1173940493|gb|OQR89893.1| (hypothetical protein THRCLA_12400 [Thraustotheca clavata])

HSP 1 Score: 185.267 bits (469), Expect = 9.353e-58
Identity = 86/116 (74.14%), Postives = 97/116 (83.62%), Query Frame = 0
Query:   27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
            DL P + LR+GVK+RP+ CD KS+ GD LSMHYTGTL KDG+KFDSS DRNQPFEFTLG GQVIKGWD GL+ MC+GEKRRLTIPS +GYGD G+  KIPG ATLVF+VELL I N
Sbjct:   19 DLPPTDPLRIGVKYRPEPCDRKSQSGDHLSMHYTGTLRKDGTKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCIGEKRRLTIPSGMGYGDHGSPPKIPGKATLVFDVELLEIKN 134          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|667483155|gb|AIG56153.1| (secreted protein [Achlya hypogyna] >gi|1173950559|gb|OQR98514.1| hypothetical protein ACHHYP_08440 [Achlya hypogyna])

HSP 1 Score: 185.267 bits (469), Expect = 1.078e-57
Identity = 87/116 (75.00%), Postives = 95/116 (81.90%), Query Frame = 0
Query:   27 DLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
            DL P   LR+GVK+RP+ CD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MCVGEKRRLTIPS +GYGD G+   IPG ATLVF+VELL I N
Sbjct:   20 DLPPTAPLRIGVKYRPEECDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAIKN 135          
BLAST of EWM29373.1 vs. NCBI_GenBank
Match: gi|1024102440|gb|KZV93699.1| (hypothetical protein EXIGLDRAFT_835522 [Exidia glandulosa HHB12029])

HSP 1 Score: 184.496 bits (467), Expect = 1.968e-57
Identity = 92/142 (64.79%), Postives = 106/142 (74.65%), Query Frame = 0
Query:    1 MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINN 142
            M+R L F  ++ + V  A+           +EKL+VGVK +P  C IKS+KGD LSMHYTGTL  DGSKFDSSLDRN PF+FTLG GQVIKGWD GLL+MC+GEKR+L IP SLGYG  GAG KIPGGATL+FEVELL I N
Sbjct:    1 MVRSLVFGVVALLAVFVAA-----------DEKLQVGVKHKPADCPIKSQKGDKLSMHYTGTLAADGSKFDSSLDRNSPFDFTLGAGQVIKGWDQGLLDMCIGEKRKLKIPPSLGYGANGAGGKIPGGATLIFEVELLDILN 131          
The following BLAST results are available for this feature:
BLAST of EWM29373.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553185315|ref|XP_005854232.1|2.397e-104100.00peptidyl-prolyl cis-trans isomerase fkbp2-like pro... [more]
gi|698808804|ref|XP_009837431.1|4.043e-6077.31FK506-binding protein 2B [Aphanomyces astaci] >gi|... [more]
gi|953501716|emb|CEG37165.1|8.321e-6065.94RxLR-like protein [Plasmopara halstedii][more]
gi|695383107|ref|XP_009517606.1|2.152e-5875.00hypothetical protein PHYSODRAFT_353748 [Phytophtho... [more]
gi|813108504|ref|XP_012194420.1|2.202e-5875.86hypothetical protein SPRG_00814 [Saprolegnia paras... [more]
gi|673044685|ref|XP_008876303.1|2.484e-5874.79hypothetical protein H310_11399 [Aphanomyces invad... [more]
gi|669139310|ref|XP_008605223.1|2.993e-5875.86FK506-binding protein 2 [Saprolegnia diclina VS20]... [more]
gi|1173940493|gb|OQR89893.1|9.353e-5874.14hypothetical protein THRCLA_12400 [Thraustotheca c... [more]
gi|667483155|gb|AIG56153.1|1.078e-5775.00secreted protein [Achlya hypogyna] >gi|1173950559|... [more]
gi|1024102440|gb|KZV93699.1|1.968e-5764.79hypothetical protein EXIGLDRAFT_835522 [Exidia gla... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1309rna1309Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications