EWM29361.1, cds1306 (CDS) Nannochloropsis gaditana

Overview
NameEWM29361.1
Unique Namecds1306
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:295997..297157 -
Alignment locationCM002457.1:295840..295923 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29361.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100028g26.3297.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:295997..297157 -
CM002457.1supercontigCM002457.1:295840..295923 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029059AB_hydrolase_5
IPR029058AB_hydrolase
Homology
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|585111889|gb|EWM29361.1| (hypothetical protein Naga_100028g26 [Nannochloropsis gaditana])

HSP 1 Score: 854.358 bits (2206), Expect = 0.000e+0
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0
Query:    1 MPQRKLGASQHFILCLAILSAPLTSRKQICSTRSQDTPRPSLLLNRQGTSSCTVTSFAPSPALAVAPLWSWSPLSFFSAIETSRGHNYPCACQHGRVRGWHPLTNAPLVRALGDNFEDQLKQTTATTHSFGPEKLSTMPSTASRSATTLREMDVRVPSRDGVHIACKVSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDSAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVFGTDELKLVTASADPLPLAPGGLRVRTELSTETCDAGRQELITERDI 414
            MPQRKLGASQHFILCLAILSAPLTSRKQICSTRSQDTPRPSLLLNRQGTSSCTVTSFAPSPALAVAPLWSWSPLSFFSAIETSRGHNYPCACQHGRVRGWHPLTNAPLVRALGDNFEDQLKQTTATTHSFGPEKLSTMPSTASRSATTLREMDVRVPSRDGVHIACKVSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDSAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVFGTDELKLVTASADPLPLAPGGLRVRTELSTETCDAGRQELITERDI
Sbjct:    1 MPQRKLGASQHFILCLAILSAPLTSRKQICSTRSQDTPRPSLLLNRQGTSSCTVTSFAPSPALAVAPLWSWSPLSFFSAIETSRGHNYPCACQHGRVRGWHPLTNAPLVRALGDNFEDQLKQTTATTHSFGPEKLSTMPSTASRSATTLREMDVRVPSRDGVHIACKVSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDSAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVFGTDELKLVTASADPLPLAPGGLRVRTELSTETCDAGRQELITERDI 414          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1026961861|ref|XP_016610004.1| (hypothetical protein SPPG_09026 [Spizellomyces punctatus DAOM BR117] >gi|907096436|gb|KND01965.1| hypothetical protein SPPG_09026 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 167.933 bits (424), Expect = 1.598e-45
Identity = 101/258 (39.15%), Postives = 149/258 (57.75%), Query Frame = 0
Query:  138 MPSTASRSATT-LREMDVRVPSRDGVHIACKV--SNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHR---GFLDSAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTE-VVTMEGADHFFFGREASLCAIVQTWLEKVFGTDELKLVTASADPLPLAPG 388
            M    SRSA    +E    VPS D V +  ++     R    V+ +HPYGPLGG+L NNVV AL  + +  G+ T+RFNFRGV  STGRTS+ GAGE  D+ A+C Y  +     P+++++ GYS+GSV   A+ G++PE+  + +I+YP  V + LTLFN +   G L S +  +  KLF+ G++D FT    F +   ELP   + V+ +  A+HF+   E +L   + +W  K  G +     +ASA PL ++PG
Sbjct:    1 MLDHVSRSAVLHYQEEQQHVPSTDKVELETRIYKGTGRKDTCVIFAHPYGPLGGNLENNVVRALFDNFAHQGYMTVRFNFRGVGRSTGRTSFRGAGEMEDVLAICHYLRSRSDLAPKRIVLCGYSYGSVAMGAIAGQVPELAGFISISYPSGVLWFLTLFNGKKSQGSLKSIST-SIPKLFITGAKDNFTSEANFQKFVDELPSENKTVIIVPEANHFWAEWEDALVGHINSWCAKT-GLNSKSGRSASASPLRISPG 256          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|575486362|ref|XP_006682475.1| (hypothetical protein BATDEDRAFT_92264 [Batrachochytrium dendrobatidis JAM81] >gi|328766789|gb|EGF76841.1| hypothetical protein BATDEDRAFT_92264 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 169.088 bits (427), Expect = 4.741e-45
Identity = 93/237 (39.24%), Postives = 136/237 (57.38%), Query Frame = 0
Query:  138 MPSTASRSATTLREMDVRVPSRDGVHIACKV--SNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQ--DPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDS--AARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVF 368
            MP   S S   L+E+ V +P+  G  +  ++   +KR    VV++HPYGPLGG + N +V AL    S  G+TTLRFNFRGV  STGRTS+ G GE  D+  VC Y LT     +PP KL++ GYS+GSV   A   ++P+V A  +++YP  V +ALTL + +  + +  +      K F+ GS+D +T   +F +    +P P  VV +  ADHF+   E +L + +  W+ KV 
Sbjct:    1 MPKAISNSLH-LKELHVDIPTAAGGVLKGRLFLGDKRKSTCVVLAHPYGPLGGDMKNYIVEALFGLFSSMGYTTLRFNFRGVGGSTGRTSFRGLGEIEDVVTVCNYVLTCTHCLEPPTKLILCGYSYGSVATGAAASQIPQVSAVVSVSYPAGVLWALTLGHQKKHISALQSTPDTIQKFFITGSKDNYTSEASFMQFVTNIPNPKTVVVVPDADHFWVDTEHALISHLNQWVVKVL 236          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1149593196|gb|OON02153.1| (hypothetical protein BSLG_07286 [Batrachochytrium salamandrivorans])

HSP 1 Score: 162.155 bits (409), Expect = 8.772e-43
Identity = 85/224 (37.95%), Postives = 131/224 (58.48%), Query Frame = 0
Query:  149 LREMDVRVPSRDGVHIACK--VSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTA--LQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLD--SAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEK 366
            LRE+ + +PS     +  +  V +K     VV++HPYGPLGG + NN+V  L  + +  G+TTLRFNFRGV  STGR+++ G GE  D+ AV ++ L+    + PP ++++ GYS+GS+   A   ++P+  A  +I+YP  V +ALTL + R  +    +      K F++G +D FT   AF + T ++P P  VV +   DHF+ G EASL   V  W+ +
Sbjct:   11 LRELHIDIPSTGDAVLKGRLFVGDKHKSICVVLAHPYGPLGGDMNNNIVEVLFSYFASLGYTTLRFNFRGVNGSTGRSTFRGFGEVDDVVAVSQFVLSGQHCKPPPTQIIMCGYSYGSIATGAAACKVPQTIATISISYPVGVLWALTLGHQRKHISGLQSLPATVLKYFIIGGKDNFTSEAAFMQFTTDMPNPKTVVVVPDIDHFWSGTEASLIGYVSQWVTR 234          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1028576727|gb|OAJ45031.1| (hypothetical protein BDEG_28199 [Batrachochytrium dendrobatidis JEL423])

HSP 1 Score: 160.614 bits (405), Expect = 8.874e-42
Identity = 93/248 (37.50%), Postives = 136/248 (54.84%), Query Frame = 0
Query:  138 MPSTASRSATTLREMDVRVPSRDGVHIACKV--SNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNF-----------RGVLPSTGRTSWTGAGEKADMRAVCEYALTALQ--DPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDS--AARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVF 368
            MP   S S   L+E+ V +P+  G  +  ++   +KR    VV++HPYGPLGG + N +V AL    S  G+TTLRFNF           RGV  STGRTS+ G GE  D+  VC Y LT     +PP KL++ GYS+GSV   A   ++P+V A  +++YP  V +ALTL + +  + +  +      K F+ GS+D +T   +F +    +P P  VV +  ADHF+   E +L + +  W+ KV 
Sbjct:    1 MPKAISNSLH-LKELHVDIPTAAGGVLKGRLFLGDKRKSTCVVLAHPYGPLGGDMKNYIVEALFGLFSSMGYTTLRFNFRLIKIRVFSNIRGVGGSTGRTSFRGLGEIEDVVTVCNYVLTCTHCLEPPTKLILCGYSYGSVATGAAASQIPQVSAVVSVSYPAGVLWALTLGHQKKHISALQSTPDTIQKFFITGSKDNYTSEASFMQFVTNIPNPKTVVVVPDADHFWVDTEHALISHLNQWVVKVL 247          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|671687168|emb|CDS11728.1| (hypothetical protein LRAMOSA03991 [Lichtheimia ramosa])

HSP 1 Score: 130.568 bits (327), Expect = 6.150e-32
Identity = 78/201 (38.81%), Postives = 111/201 (55.22%), Query Frame = 0
Query:  176 AVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDP-PQKLLIVGYSHGSVVGAALGGEMPE-VH-AYAAIAYPFSVAFALTLFNHRGFLDSAAR--GNKHKLFVMGSQDQFTRIG---AFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVF 368
            A+V++HPYGPLGG+  NNV+ AL  + +  GF T   NFRG   S GRTSWTG  E+ D +AV ++ L A + P P  L+I GYS GS+V A++    PE VH +Y  I+YP +V +AL       F         ++    + G  DQFT +G   A+  + R+     E   +  ADHF+FG E +L   +  W+ K+ 
Sbjct:   34 AIVLAHPYGPLGGNNRNNVIMALHGYFASKGFITASINFRGCGRSKGRTSWTGMPERGDYQAVIDHLLKADKYPKPSHLIISGYSFGSMVAASMAP--PEDVHCSYLLISYPLNVQWALATIKSSFFTSKVDELLASQQVHVIYGGHDQFTGLGSYQAWISKKRQNNKQLEATLVPEADHFWFGMEDTLVEKINDWISKIL 232          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|661175096|emb|CDH61566.1| (alpha beta n-terminal domain protein [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 131.339 bits (329), Expect = 6.747e-32
Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = 0
Query:  176 AVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDP-PQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDSAAR--GNKHKLFVMGSQDQFTRIG---AFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVF 368
            A+V++HPYGPLGG+  NNV+ AL +     GF T   NFRG   S GRTSWTG  E+ D +AV ++ L A + P P  L+I GYS GS++ A++        +Y  I+YP +V +AL       F         ++    + G  DQFT +G   A+  + R+     E   +  ADHF+FG E +L   V +W+ ++ 
Sbjct:   58 AIVLAHPYGPLGGNNRNNVIMALHEFFVTKGFITASINFRGCGRSKGRTSWTGIPERGDYQAVIDHLLEASKYPKPSHLIISGYSFGSMIAASMAQPQDVSCSYLLISYPLNVQWALATIKSSFFTSKVDELLASRQAYIIYGGHDQFTGMGSYQAWISKKRQDNKQLEATLVPEADHFWFGMEDTLVEKVNSWISRIL 256          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1149593197|gb|OON02154.1| (hypothetical protein, variant [Batrachochytrium salamandrivorans])

HSP 1 Score: 131.339 bits (329), Expect = 7.214e-32
Identity = 68/181 (37.57%), Postives = 106/181 (58.56%), Query Frame = 0
Query:  190 LGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTA--LQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLD--SAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEK 366
            + NN+V  L  + +  G+TTLRFNFRGV  STGR+++ G GE  D+ AV ++ L+    + PP ++++ GYS+GS+   A   ++P+  A  +I+YP  V +ALTL + R  +    +      K F++G +D FT   AF + T ++P P  VV +   DHF+ G EASL   V  W+ +
Sbjct:    1 MNNNIVEVLFSYFASLGYTTLRFNFRGVNGSTGRSTFRGFGEVDDVVAVSQFVLSGQHCKPPPTQIIMCGYSYGSIATGAAACKVPQTIATISISYPVGVLWALTLGHQRKHISGLQSLPATVLKYFIIGGKDNFTSEAAFMQFTTDMPNPKTVVVVPDIDHFWSGTEASLIGYVSQWVTR 181          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1021067072|emb|SAL96903.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 134.806 bits (338), Expect = 9.176e-32
Identity = 82/209 (39.23%), Postives = 116/209 (55.50%), Query Frame = 0
Query:  176 AVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQ------KLLIVGYSHGSVVGAAL-GGEMPEVHAYAAIAYPFSVAFALTLFNHRGF------LDSAARGNKHK---LFVMGSQDQFTRIGAFARRTRELPPPTEVVT-MEGADHFFFGREASLCAIVQTWLEKV 367
            A+VI+HPYGPLGG++ NNVV AL + L   G+TT  FNFRG   STGRTSWTG  E+ D +AV +Y L    +  +       LL+ GYS+GS++ A++    +P   +Y  I+YP  VA+AL+      F      L +A   N+     L + G QDQFT + A+    + +   T   T +EG DHF+  +E  L   + TWL  +
Sbjct:  204 AIVIAHPYGPLGGNMHNNVVIALQKSLMNKGYTTASFNFRGCGKSTGRTSWTGIPEQKDYQAVIDYLLERSDNDDKGFPAISHLLVCGYSYGSMIAASIRESRVPT--SYLLISYPLRVAWALSTTKMSYFRSMLNELMTAPTNNEPHPALLLIFGDQDQFTSMHAYQSWVKTINCDTAKSTVVEGVDHFWMDKEPQLLEHIYTWLSTI 410          
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1183380757|gb|ORY06192.1| (alpha/beta-hydrolase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 131.339 bits (329), Expect = 9.493e-32
Identity = 79/237 (33.33%), Postives = 121/237 (51.05%), Query Frame = 0
Query:  167 KVSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVC------EYALTALQDPPQ-----KLLIVGYSHGSVVGAALG-GEMPEVHA-YAAIAYPFSVAFALTLFNHRGFL-----------------DSAARGN---KHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVT---MEGADHFFFGREASLCAIVQTWLEKV 367
            ++S K     +V+SHPYGPLGG+  NNVV  L  H ++ G   + FN RG   S+GRTSWTG  E  D++ +       E   +  ++ P      K++I GYS+GSV+ ++L   + P V   YA I+YP SV + LTL+    F                   S+   N   +  LF+ G  DQFT + ++ +  R+ P   + +    +EG DHF+FG+E  +   ++ WL +V
Sbjct:   35 ELSKKAEITGIVLSHPYGPLGGNYDNNVVRKLHSHFAKKGLVVVSFNARGSGNSSGRTSWTGIPETEDIKIIVGFLAKEEEVFSHTENAPDFPKPSKIVICGYSYGSVISSSLRPMDFPNVKLFYAFISYPLSVVWLLTLWKCNWFFKRVEEIMGISKIPSSPEQSSLNENIEPQPVLFIYGDSDQFTSLSSYQKWLRKFPAELQNIQPRLIEGCDHFWFGKENKIAQCIEDWLNEV 271          
The following BLAST results are available for this feature:
BLAST of EWM29361.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111889|gb|EWM29361.1|0.000e+0100.00hypothetical protein Naga_100028g26 [Nannochlorops... [more]
gi|1026961861|ref|XP_016610004.1|1.598e-4539.15hypothetical protein SPPG_09026 [Spizellomyces pun... [more]
gi|575486362|ref|XP_006682475.1|4.741e-4539.24hypothetical protein BATDEDRAFT_92264 [Batrachochy... [more]
gi|1149593196|gb|OON02153.1|8.772e-4337.95hypothetical protein BSLG_07286 [Batrachochytrium ... [more]
gi|1028576727|gb|OAJ45031.1|8.874e-4237.50hypothetical protein BDEG_28199 [Batrachochytrium ... [more]
gi|671687168|emb|CDS11728.1|6.150e-3238.81hypothetical protein LRAMOSA03991 [Lichtheimia ram... [more]
gi|661175096|emb|CDH61566.1|6.747e-3236.68alpha beta n-terminal domain protein [Lichtheimia ... [more]
gi|1149593197|gb|OON02154.1|7.214e-3237.57hypothetical protein, variant [Batrachochytrium sa... [more]
gi|1021067072|emb|SAL96903.1|9.176e-3239.23hypothetical protein [Absidia glauca][more]
gi|1183380757|gb|ORY06192.1|9.493e-3233.33alpha/beta-hydrolase [Basidiobolus meristosporus C... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1308rna1308Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications