EWM29361.1, cds1306 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|585111889|gb|EWM29361.1| (hypothetical protein Naga_100028g26 [Nannochloropsis gaditana]) HSP 1 Score: 854.358 bits (2206), Expect = 0.000e+0 Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0
Query: 1 MPQRKLGASQHFILCLAILSAPLTSRKQICSTRSQDTPRPSLLLNRQGTSSCTVTSFAPSPALAVAPLWSWSPLSFFSAIETSRGHNYPCACQHGRVRGWHPLTNAPLVRALGDNFEDQLKQTTATTHSFGPEKLSTMPSTASRSATTLREMDVRVPSRDGVHIACKVSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDSAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVFGTDELKLVTASADPLPLAPGGLRVRTELSTETCDAGRQELITERDI 414
MPQRKLGASQHFILCLAILSAPLTSRKQICSTRSQDTPRPSLLLNRQGTSSCTVTSFAPSPALAVAPLWSWSPLSFFSAIETSRGHNYPCACQHGRVRGWHPLTNAPLVRALGDNFEDQLKQTTATTHSFGPEKLSTMPSTASRSATTLREMDVRVPSRDGVHIACKVSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDSAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVFGTDELKLVTASADPLPLAPGGLRVRTELSTETCDAGRQELITERDI
Sbjct: 1 MPQRKLGASQHFILCLAILSAPLTSRKQICSTRSQDTPRPSLLLNRQGTSSCTVTSFAPSPALAVAPLWSWSPLSFFSAIETSRGHNYPCACQHGRVRGWHPLTNAPLVRALGDNFEDQLKQTTATTHSFGPEKLSTMPSTASRSATTLREMDVRVPSRDGVHIACKVSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDSAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVFGTDELKLVTASADPLPLAPGGLRVRTELSTETCDAGRQELITERDI 414
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1026961861|ref|XP_016610004.1| (hypothetical protein SPPG_09026 [Spizellomyces punctatus DAOM BR117] >gi|907096436|gb|KND01965.1| hypothetical protein SPPG_09026 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 167.933 bits (424), Expect = 1.598e-45 Identity = 101/258 (39.15%), Postives = 149/258 (57.75%), Query Frame = 0
Query: 138 MPSTASRSATT-LREMDVRVPSRDGVHIACKV--SNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHR---GFLDSAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTE-VVTMEGADHFFFGREASLCAIVQTWLEKVFGTDELKLVTASADPLPLAPG 388
M SRSA +E VPS D V + ++ R V+ +HPYGPLGG+L NNVV AL + + G+ T+RFNFRGV STGRTS+ GAGE D+ A+C Y + P+++++ GYS+GSV A+ G++PE+ + +I+YP V + LTLFN + G L S + + KLF+ G++D FT F + ELP + V+ + A+HF+ E +L + +W K G + +ASA PL ++PG
Sbjct: 1 MLDHVSRSAVLHYQEEQQHVPSTDKVELETRIYKGTGRKDTCVIFAHPYGPLGGNLENNVVRALFDNFAHQGYMTVRFNFRGVGRSTGRTSFRGAGEMEDVLAICHYLRSRSDLAPKRIVLCGYSYGSVAMGAIAGQVPELAGFISISYPSGVLWFLTLFNGKKSQGSLKSIST-SIPKLFITGAKDNFTSEANFQKFVDELPSENKTVIIVPEANHFWAEWEDALVGHINSWCAKT-GLNSKSGRSASASPLRISPG 256
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|575486362|ref|XP_006682475.1| (hypothetical protein BATDEDRAFT_92264 [Batrachochytrium dendrobatidis JAM81] >gi|328766789|gb|EGF76841.1| hypothetical protein BATDEDRAFT_92264 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 169.088 bits (427), Expect = 4.741e-45 Identity = 93/237 (39.24%), Postives = 136/237 (57.38%), Query Frame = 0
Query: 138 MPSTASRSATTLREMDVRVPSRDGVHIACKV--SNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQ--DPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDS--AARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVF 368
MP S S L+E+ V +P+ G + ++ +KR VV++HPYGPLGG + N +V AL S G+TTLRFNFRGV STGRTS+ G GE D+ VC Y LT +PP KL++ GYS+GSV A ++P+V A +++YP V +ALTL + + + + + K F+ GS+D +T +F + +P P VV + ADHF+ E +L + + W+ KV
Sbjct: 1 MPKAISNSLH-LKELHVDIPTAAGGVLKGRLFLGDKRKSTCVVLAHPYGPLGGDMKNYIVEALFGLFSSMGYTTLRFNFRGVGGSTGRTSFRGLGEIEDVVTVCNYVLTCTHCLEPPTKLILCGYSYGSVATGAAASQIPQVSAVVSVSYPAGVLWALTLGHQKKHISALQSTPDTIQKFFITGSKDNYTSEASFMQFVTNIPNPKTVVVVPDADHFWVDTEHALISHLNQWVVKVL 236
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1149593196|gb|OON02153.1| (hypothetical protein BSLG_07286 [Batrachochytrium salamandrivorans]) HSP 1 Score: 162.155 bits (409), Expect = 8.772e-43 Identity = 85/224 (37.95%), Postives = 131/224 (58.48%), Query Frame = 0
Query: 149 LREMDVRVPSRDGVHIACK--VSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTA--LQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLD--SAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEK 366
LRE+ + +PS + + V +K VV++HPYGPLGG + NN+V L + + G+TTLRFNFRGV STGR+++ G GE D+ AV ++ L+ + PP ++++ GYS+GS+ A ++P+ A +I+YP V +ALTL + R + + K F++G +D FT AF + T ++P P VV + DHF+ G EASL V W+ +
Sbjct: 11 LRELHIDIPSTGDAVLKGRLFVGDKHKSICVVLAHPYGPLGGDMNNNIVEVLFSYFASLGYTTLRFNFRGVNGSTGRSTFRGFGEVDDVVAVSQFVLSGQHCKPPPTQIIMCGYSYGSIATGAAACKVPQTIATISISYPVGVLWALTLGHQRKHISGLQSLPATVLKYFIIGGKDNFTSEAAFMQFTTDMPNPKTVVVVPDIDHFWSGTEASLIGYVSQWVTR 234
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1028576727|gb|OAJ45031.1| (hypothetical protein BDEG_28199 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 160.614 bits (405), Expect = 8.874e-42 Identity = 93/248 (37.50%), Postives = 136/248 (54.84%), Query Frame = 0
Query: 138 MPSTASRSATTLREMDVRVPSRDGVHIACKV--SNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNF-----------RGVLPSTGRTSWTGAGEKADMRAVCEYALTALQ--DPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDS--AARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVF 368
MP S S L+E+ V +P+ G + ++ +KR VV++HPYGPLGG + N +V AL S G+TTLRFNF RGV STGRTS+ G GE D+ VC Y LT +PP KL++ GYS+GSV A ++P+V A +++YP V +ALTL + + + + + K F+ GS+D +T +F + +P P VV + ADHF+ E +L + + W+ KV
Sbjct: 1 MPKAISNSLH-LKELHVDIPTAAGGVLKGRLFLGDKRKSTCVVLAHPYGPLGGDMKNYIVEALFGLFSSMGYTTLRFNFRLIKIRVFSNIRGVGGSTGRTSFRGLGEIEDVVTVCNYVLTCTHCLEPPTKLILCGYSYGSVATGAAASQIPQVSAVVSVSYPAGVLWALTLGHQKKHISALQSTPDTIQKFFITGSKDNYTSEASFMQFVTNIPNPKTVVVVPDADHFWVDTEHALISHLNQWVVKVL 247
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|671687168|emb|CDS11728.1| (hypothetical protein LRAMOSA03991 [Lichtheimia ramosa]) HSP 1 Score: 130.568 bits (327), Expect = 6.150e-32 Identity = 78/201 (38.81%), Postives = 111/201 (55.22%), Query Frame = 0
Query: 176 AVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDP-PQKLLIVGYSHGSVVGAALGGEMPE-VH-AYAAIAYPFSVAFALTLFNHRGFLDSAAR--GNKHKLFVMGSQDQFTRIG---AFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVF 368
A+V++HPYGPLGG+ NNV+ AL + + GF T NFRG S GRTSWTG E+ D +AV ++ L A + P P L+I GYS GS+V A++ PE VH +Y I+YP +V +AL F ++ + G DQFT +G A+ + R+ E + ADHF+FG E +L + W+ K+
Sbjct: 34 AIVLAHPYGPLGGNNRNNVIMALHGYFASKGFITASINFRGCGRSKGRTSWTGMPERGDYQAVIDHLLKADKYPKPSHLIISGYSFGSMVAASMAP--PEDVHCSYLLISYPLNVQWALATIKSSFFTSKVDELLASQQVHVIYGGHDQFTGLGSYQAWISKKRQNNKQLEATLVPEADHFWFGMEDTLVEKINDWISKIL 232
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|661175096|emb|CDH61566.1| (alpha beta n-terminal domain protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 131.339 bits (329), Expect = 6.747e-32 Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = 0
Query: 176 AVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDP-PQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLDSAAR--GNKHKLFVMGSQDQFTRIG---AFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEKVF 368
A+V++HPYGPLGG+ NNV+ AL + GF T NFRG S GRTSWTG E+ D +AV ++ L A + P P L+I GYS GS++ A++ +Y I+YP +V +AL F ++ + G DQFT +G A+ + R+ E + ADHF+FG E +L V +W+ ++
Sbjct: 58 AIVLAHPYGPLGGNNRNNVIMALHEFFVTKGFITASINFRGCGRSKGRTSWTGIPERGDYQAVIDHLLEASKYPKPSHLIISGYSFGSMIAASMAQPQDVSCSYLLISYPLNVQWALATIKSSFFTSKVDELLASRQAYIIYGGHDQFTGMGSYQAWISKKRQDNKQLEATLVPEADHFWFGMEDTLVEKVNSWISRIL 256
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1149593197|gb|OON02154.1| (hypothetical protein, variant [Batrachochytrium salamandrivorans]) HSP 1 Score: 131.339 bits (329), Expect = 7.214e-32 Identity = 68/181 (37.57%), Postives = 106/181 (58.56%), Query Frame = 0
Query: 190 LGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTA--LQDPPQKLLIVGYSHGSVVGAALGGEMPEVHAYAAIAYPFSVAFALTLFNHRGFLD--SAARGNKHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVTMEGADHFFFGREASLCAIVQTWLEK 366
+ NN+V L + + G+TTLRFNFRGV STGR+++ G GE D+ AV ++ L+ + PP ++++ GYS+GS+ A ++P+ A +I+YP V +ALTL + R + + K F++G +D FT AF + T ++P P VV + DHF+ G EASL V W+ +
Sbjct: 1 MNNNIVEVLFSYFASLGYTTLRFNFRGVNGSTGRSTFRGFGEVDDVVAVSQFVLSGQHCKPPPTQIIMCGYSYGSIATGAAACKVPQTIATISISYPVGVLWALTLGHQRKHISGLQSLPATVLKYFIIGGKDNFTSEAAFMQFTTDMPNPKTVVVVPDIDHFWSGTEASLIGYVSQWVTR 181
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1021067072|emb|SAL96903.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 134.806 bits (338), Expect = 9.176e-32 Identity = 82/209 (39.23%), Postives = 116/209 (55.50%), Query Frame = 0
Query: 176 AVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVCEYALTALQDPPQ------KLLIVGYSHGSVVGAAL-GGEMPEVHAYAAIAYPFSVAFALTLFNHRGF------LDSAARGNKHK---LFVMGSQDQFTRIGAFARRTRELPPPTEVVT-MEGADHFFFGREASLCAIVQTWLEKV 367
A+VI+HPYGPLGG++ NNVV AL + L G+TT FNFRG STGRTSWTG E+ D +AV +Y L + + LL+ GYS+GS++ A++ +P +Y I+YP VA+AL+ F L +A N+ L + G QDQFT + A+ + + T T +EG DHF+ +E L + TWL +
Sbjct: 204 AIVIAHPYGPLGGNMHNNVVIALQKSLMNKGYTTASFNFRGCGKSTGRTSWTGIPEQKDYQAVIDYLLERSDNDDKGFPAISHLLVCGYSYGSMIAASIRESRVPT--SYLLISYPLRVAWALSTTKMSYFRSMLNELMTAPTNNEPHPALLLIFGDQDQFTSMHAYQSWVKTINCDTAKSTVVEGVDHFWMDKEPQLLEHIYTWLSTI 410
BLAST of EWM29361.1 vs. NCBI_GenBank
Match: gi|1183380757|gb|ORY06192.1| (alpha/beta-hydrolase [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 131.339 bits (329), Expect = 9.493e-32 Identity = 79/237 (33.33%), Postives = 121/237 (51.05%), Query Frame = 0
Query: 167 KVSNKRSPYAVVISHPYGPLGGHLGNNVVWALTQHLSRFGFTTLRFNFRGVLPSTGRTSWTGAGEKADMRAVC------EYALTALQDPPQ-----KLLIVGYSHGSVVGAALG-GEMPEVHA-YAAIAYPFSVAFALTLFNHRGFL-----------------DSAARGN---KHKLFVMGSQDQFTRIGAFARRTRELPPPTEVVT---MEGADHFFFGREASLCAIVQTWLEKV 367
++S K +V+SHPYGPLGG+ NNVV L H ++ G + FN RG S+GRTSWTG E D++ + E + ++ P K++I GYS+GSV+ ++L + P V YA I+YP SV + LTL+ F S+ N + LF+ G DQFT + ++ + R+ P + + +EG DHF+FG+E + ++ WL +V
Sbjct: 35 ELSKKAEITGIVLSHPYGPLGGNYDNNVVRKLHSHFAKKGLVVVSFNARGSGNSSGRTSWTGIPETEDIKIIVGFLAKEEEVFSHTENAPDFPKPSKIVICGYSYGSVISSSLRPMDFPNVKLFYAFISYPLSVVWLLTLWKCNWFFKRVEEIMGISKIPSSPEQSSLNENIEPQPVLFIYGDSDQFTSLSSYQKWLRKFPAELQNIQPRLIEGCDHFWFGKENKIAQCIEDWLNEV 271 The following BLAST results are available for this feature:
BLAST of EWM29361.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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