EWM29368.1, cds1300 (CDS) Nannochloropsis gaditana

Overview
NameEWM29368.1
Unique Namecds1300
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:284274..284532 +
Alignment locationCM002457.1:284745..285264 +
Alignment locationCM002457.1:285330..285471 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29368.1
ProductHistidine phosphatase superfamily, clade-1
Orig transcript idgnl|cribi|Naga_100028g19.3304.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:284274..284532 +
CM002457.1supercontigCM002457.1:284745..285264 +
CM002457.1supercontigCM002457.1:285330..285471 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam
IPR013078His_Pase_superF_clade-1
Homology
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|585111896|gb|EWM29368.1| (Histidine phosphatase superfamily, clade-1 [Nannochloropsis gaditana])

HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query:    1 MTATVTGGKTREENEQGQGQEELKLQQGGRKLREHEGRALTPEQVKDLCFSLTKHPRVKAFPVSNAPEDVPAGMQIKTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRWGGTDRGERFWRTEQKSAYISLTKWCENRRHSKYHMIRLFLFPICKN 306
            MTATVTGGKTREENEQGQGQEELKLQQGGRKLREHEGRALTPEQVKDLCFSLTKHPRVKAFPVSNAPEDVPAGMQIKTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRWGGTDRGERFWRTEQKSAYISLTKWCENRRHSKYHMIRLFLFPICKN
Sbjct:    1 MTATVTGGKTREENEQGQGQEELKLQQGGRKLREHEGRALTPEQVKDLCFSLTKHPRVKAFPVSNAPEDVPAGMQIKTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRWGGTDRGERFWRTEQKSAYISLTKWCENRRHSKYHMIRLFLFPICKN 306          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|553191879|ref|XP_005855474.1| (hypothetical protein NGA_0130400 [Nannochloropsis gaditana CCMP526] >gi|422293576|gb|EKU20876.1| hypothetical protein NGA_0130400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0
Identity = 264/281 (93.95%), Postives = 267/281 (95.02%), Query Frame = 0
Query:    1 MTATVTGGKTREENEQGQGQEELKLQQGGRKLREHEGRALTPEQVKDLCFSLTKHPRVKAFPVSNAPEDVPAGMQIKTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRWGGTDRGERFWRTEQKSAYISL 281
            MTATVTGGKTREENEQGQGQEELKLQQGGRKLREHEGRALTPEQVKDLCFSLTKHPRVKAFPVSNAPEDVPAGMQIKTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRW        F   E ++ Y+ L
Sbjct:    1 MTATVTGGKTREENEQGQGQEELKLQQGGRKLREHEGRALTPEQVKDLCFSLTKHPRVKAFPVSNAPEDVPAGMQIKTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRW--------FENAELRAVYLIL 273          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|299471448|emb|CBN79400.1| (catalytic, putative [Ectocarpus siliculosus])

HSP 1 Score: 166.777 bits (421), Expect = 5.464e-47
Identity = 94/208 (45.19%), Postives = 119/208 (57.21%), Query Frame = 0
Query:   77 KTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTE---HHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRWGGTDRGERFWRTEQKSAYISL 281
            KTV+F+RHAE  HNEA    GRAAYA    LD +LT LG  QC  LK +   I+    LVVVSPL RA+ TA L  D    V W+ALE VRER G + CD+RR    L+ EYP++ F+ I +E   + +     RE    MA+RG E  +WL+ RPE  I VVTHSAFL  LF E  + A P  ++W        F   E +S ++ L
Sbjct:   28 KTVHFIRHAEGTHNEAALKEGRAAYAKIEHLDARLTDLGKQQCATLKATKHGIEKEAQLVVVSPLARAIQTATLTIDQVEGVPWVALECVRERAGAHPCDRRRCVSELKGEYPNISFDAIKDEKDVYFDSLGEEREPNDLMADRGRELFSWLKDRPETNIVVVTHSAFLLCLFNEAMQAA-PETAKW--------FENCELRSVFLEL 226          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|299471449|emb|CBN79401.1| (catalytic, putative [Ectocarpus siliculosus])

HSP 1 Score: 162.155 bits (409), Expect = 3.219e-45
Identity = 87/177 (49.15%), Postives = 108/177 (61.02%), Query Frame = 0
Query:   77 KTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTEHH---RETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVF 250
            KTV+F+RHAE  HNEA    GRAA++    LD +LT LG  QC  LK +   I+   +LVVVSPL RA+ TA LA D    V W+ALE VRER G   CD+RR    L+ EYP++ F+ I ++D  + +     RET   MA RG E  +WLR RPE  I VVTHS FL +LF  V 
Sbjct:   28 KTVHFLRHAEGTHNEAALKEGRAAFSKIEHLDARLTDLGKEQCATLKAANHGIEKEAELVVVSPLTRAIETAMLAIDQVEGVPWVALECVRERAGVQPCDRRRCVSELKMEYPNISFDAITDDDDAYFDSQGDERETYDSMAHRGRELFSWLRDRPETNIVVVTHSGFLLSLFKRVM 204          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|1129168843|gb|OLP79598.1| (Quinone oxidoreductase-like protein 2-like [Symbiodinium microadriaticum])

HSP 1 Score: 139.813 bits (351), Expect = 2.602e-33
Identity = 76/191 (39.79%), Postives = 114/191 (59.69%), Query Frame = 0
Query:   77 KTVYFVRHAEALHN------EAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDH-RREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIGEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRW 260
            K ++F+RH +  HN      + ++++ +  Y  P   DP LT++G  Q  AL+    A ++  +LVVVSP+ RALMT+ +AF H    V ++A E+ +E+   N+CD RR     + ++P+VDF  I EED   +  H E+  E+AER  +F+ WLR R E  I V THSA+L +LF  V +C DPA+S W
Sbjct:  840 KLLHFIRHGQGFHNSLNDFCKVYQVKAKP-YNIPEVFDPPLTEIGRQQAKALQS--RARETKAELVVVSPMSRALMTSNIAFAHCIGHVPFLAHESCKEKSHGNSCDYRRSASDAKQDFPNVDFSLIPEEDPLLSTLHMESDLEVAERAYDFMLWLRNRSETEIVVSTHSAWLFSLFNAVLKCDDPALSEW 1027          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|527189225|gb|EPS60970.1| (phosphoglycerate mutase-like protein, partial [Genlisea aurea])

HSP 1 Score: 130.954 bits (328), Expect = 3.391e-33
Identity = 82/208 (39.42%), Postives = 119/208 (57.21%), Query Frame = 0
Query:   77 KTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCL-ALKPSVEA--IQSSIDLVVVSPLRRALMTAALAFDHRR-EVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENI-GEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRWGGTDRGERFWRTEQKSAYI 279
            K ++ VRH +ALHN A + +G   Y+   F D +L+  G+ Q +  L+ SV +  + S I+LVVVSPL R L TAA  F     +  ++ALE  RER+G N CDKRR     ++ +P +DF  I  +ED  WT  +RE+  E+  RG++F  WL GR E  I VV+HSAFL+   A V+   DP++      + G+ F   E +S  +
Sbjct:   14 KIIHLVRHGQALHNVAVE-KGDTGYSSSRFFDAELSPRGLQQVVDGLRTSVRSSDLCSRIELVVVSPLMRTLQTAAGVFGGDGIDAPFVALELCRERLGVNWCDKRRNIAEYKSLFPHIDFSQIESDEDALWTPDYRESDEEIRARGIQFFDWLCGREEKEIAVVSHSAFLNQTLA-VYGGRDPSVE----AEIGQPFSNCELRSIVL 215          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|676377655|ref|XP_009032106.1| (hypothetical protein AURANDRAFT_5157, partial [Aureococcus anophagefferens] >gi|323457102|gb|EGB12968.1| hypothetical protein AURANDRAFT_5157, partial [Aureococcus anophagefferens])

HSP 1 Score: 129.413 bits (324), Expect = 7.969e-33
Identity = 78/186 (41.94%), Postives = 106/186 (56.99%), Query Frame = 0
Query:   77 KTVYFVRHAEALHNEAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREV-SWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENIG-EEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRW 260
            K V+ +RH +  HN    +     Y D    D  LT LG +Q   L+ + + I S I+LVVVSPLRRA  TAAL+  H R V  W+    V+E  GK+TCD+RR R  ++ ++P VD+  +  E D  WT   RE P  +++R   FL WLR RPE  + V THSA+L TL     +CADP ++ W
Sbjct:    1 KMVHLIRHGQGYHNLLGDV-----YRDFGRSDAPLTALGRTQAKGLRVATK-ILSGIELVVVSPLRRAAETAALSMPHLRTVVPWVGHPAVQETSGKHTCDRRRDRSEIKDDFPWVDWGLVKPERDGVWTA-DREQPKAVSDRAYAFLLWLRERPEREVAVATHSAWLFTLLNSCVDCADPQLAAW 179          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|551676373|ref|XP_005840940.1| (hypothetical protein GUITHDRAFT_160757 [Guillardia theta CCMP2712] >gi|428185107|gb|EKX53960.1| hypothetical protein GUITHDRAFT_160757 [Guillardia theta CCMP2712])

HSP 1 Score: 131.724 bits (330), Expect = 1.125e-30
Identity = 96/238 (40.34%), Postives = 124/238 (52.10%), Query Frame = 0
Query:   56 PRVK-AFPVSNAPEDVPAGMQIKTVYFVRHAEALHNEAFK--IRG----RAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHRREVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENI--GEEDTRWTEHH---RETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAEVFECADPAMSRWGGTDRGERFWRTEQKSAYISL 281
            PR+  AFP S A          KTV+FVRHAE  HN A K  +RG     AA  DPSF D KL+  G  QC  L+ + + +  S  LV+VSPL R L T  L F  R++V  IALE VRER GK+ CD RR    L  ++P V+F  I  G +    T      RE+ AE+  R  +FL ++  RPE  I VV+HS+FL+ +F E F        +W   +   RF   E +S  I  
Sbjct:  514 PRIHGAFPKSKA----------KTVHFVRHAEGFHNVAAKKHVRGSREYEAALDDPSFFDAKLSPHGEEQCRNLRSTSDHVDYS--LVLVSPLTRTLQTYTLGFRERKDVPVIALEHVRERFGKHPCDSRRSVQELRQDFPQVNFTFIAAGPDPHLCTPESCPPRESDAEIDVRVQQFLDFVASRPEKEILVVSHSSFLARMFQEHF--------KWEEREGKARFENAELRSVVIPF 731          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|551560523|ref|XP_005767160.1| (hypothetical protein EMIHUDRAFT_197255 [Emiliania huxleyi CCMP1516] >gi|485617556|gb|EOD14731.1| hypothetical protein EMIHUDRAFT_197255 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 124.02 bits (310), Expect = 3.379e-30
Identity = 80/192 (41.67%), Postives = 110/192 (57.29%), Query Frame = 0
Query:   63 VSNAPEDVPAGMQIKTVYFVRHAEALHN---EAFK---IRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSIDLVVVSPLRRALMTAALAFDHR-REVSWIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENI-GEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLF 246
            V + P    AG  +K V+++RH +  HN   + +K   I+G+  Y  P   DP LT +G  Q +AL+ + +++  S  LVVVSPL RA  TA LAFDH    V ++A E+ RE  G N CD RR     + ++PDVD+  +  +ED  +    RE+ A +AERG  FLAWLR R E  + V THSAFL  L 
Sbjct:   36 VLDQPPSGAAGGDVKLVHWIRHGQGFHNLLSDLYKEHGIQGKP-YLRPELHDPPLTAVGREQAVALRSTTQSLSPS--LVVVSPLARATKTALLAFDHLVGRVPFLAHESCREISGVNACDGRRSA---KKDFPDVDYSLMPSDEDAFFDPAVRESQAALAERGYAFLAWLRSREEGEVAVGTHSAFLFALL 221          
BLAST of EWM29368.1 vs. NCBI_GenBank
Match: gi|551656276|ref|XP_005830911.1| (hypothetical protein GUITHDRAFT_163684 [Guillardia theta CCMP2712] >gi|428175039|gb|EKX43931.1| hypothetical protein GUITHDRAFT_163684 [Guillardia theta CCMP2712])

HSP 1 Score: 124.405 bits (311), Expect = 1.655e-29
Identity = 82/220 (37.27%), Postives = 118/220 (53.64%), Query Frame = 0
Query:   52 LTKHPRVKAFPVSNA-----PEDVPAGM----QIKTVYFVRHAEALHN------EAFKIRGRAAYADPSFLDPKLTKLGVSQCLALKPSVEAIQSSID--LVVVSPLRRALMTAALAFDHRREVS----WIALETVRERIGKNTCDKRRRRGVLEAEYPDVDFENI--GEEDTRWTEHHRETPAEMAERGLEFLAWLRGRPEDRIGVVTHSAFLSTLFAE 248
            +++ P + +FP S++      ED+   +    + K VYF+RHAEA HN      E   +  +  ++   F D  LT  GV QC  L+  ++++   +D  +VVVSPL R L TA L     + +     +IA +  RERI     D RRR  VL+ E+P+VDF      E D+ W +H +E      ERG+ FL WL  RPE RI VVTHS FL+ LF++
Sbjct:   77 ISRMPSMGSFPDSDSYAFSHNEDLGFSIFLERRCKVVYFIRHAEAFHNIAEREHELGSLYLQEEHSGWKFWDAGLTPKGVEQCAKLRKELKSMAHQLDCEVVVVSPLTRTLQTARLTIGSVKFMDSPPPFIATDLCRERITNCPADSRRRLSVLKEEFPEVDFSQCIQSEHDSMWFDH-KEDSQLCKERGIRFLKWLAKRPESRIAVVTHSGFLNRLFSQ 295          
The following BLAST results are available for this feature:
BLAST of EWM29368.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111896|gb|EWM29368.1|0.000e+0100.00Histidine phosphatase superfamily, clade-1 [Nannoc... [more]
gi|553191879|ref|XP_005855474.1|0.000e+093.95hypothetical protein NGA_0130400 [Nannochloropsis ... [more]
gi|299471448|emb|CBN79400.1|5.464e-4745.19catalytic, putative [Ectocarpus siliculosus][more]
gi|299471449|emb|CBN79401.1|3.219e-4549.15catalytic, putative [Ectocarpus siliculosus][more]
gi|1129168843|gb|OLP79598.1|2.602e-3339.79Quinone oxidoreductase-like protein 2-like [Symbio... [more]
gi|527189225|gb|EPS60970.1|3.391e-3339.42phosphoglycerate mutase-like protein, partial [Gen... [more]
gi|676377655|ref|XP_009032106.1|7.969e-3341.94hypothetical protein AURANDRAFT_5157, partial [Aur... [more]
gi|551676373|ref|XP_005840940.1|1.125e-3040.34hypothetical protein GUITHDRAFT_160757 [Guillardia... [more]
gi|551560523|ref|XP_005767160.1|3.379e-3041.67hypothetical protein EMIHUDRAFT_197255 [Emiliania ... [more]
gi|551656276|ref|XP_005830911.1|1.655e-2937.27hypothetical protein GUITHDRAFT_163684 [Guillardia... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1302rna1302Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications