EWM29392.1, cds1280 (CDS) Nannochloropsis gaditana

Overview
NameEWM29392.1
Unique Namecds1280
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:234486..234552 -
Alignment locationCM002457.1:233238..234391 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29392.1
Product3-ketoacyl- mitochondrial
Orig transcript idgnl|cribi|Naga_100042g8.5639.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:234486..234552 -
CM002457.1supercontigCM002457.1:233238..234391 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006629lipid metabolic process
GO:0009056catabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR016039Thiolase-like
IPR020613Thiolase_CS
IPR020615Thiolase_acyl_enz_int_AS
IPR020617Thiolase_C
IPR020616Thiolase_N
IPR002155Thiolase
IPR016038Thiolase-like_subgr
Homology
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|553184575|ref|XP_005854113.1| (beta-ketoacyl-CoA thiolase [Nannochloropsis gaditana CCMP526] >gi|422294949|gb|EKU22248.1| beta-ketoacyl-CoA thiolase [Nannochloropsis gaditana CCMP526] >gi|585111921|gb|EWM29392.1| 3-ketoacyl- mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0
Query:    1 MSASSFAARKGLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQAV 406
            MSASSFAARKGLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQAV
Sbjct:    1 MSASSFAARKGLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQAV 406          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|224003771|ref|XP_002291557.1| (3-ketoacyl-coa thiolase, mitochondrial [Thalassiosira pseudonana CCMP1335] >gi|220973333|gb|EED91664.1| 3-ketoacyl-coa thiolase, mitochondrial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0
Identity = 256/395 (64.81%), Postives = 303/395 (76.71%), Query Frame = 0
Query:   12 LFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQAV 406
            +FIV AKRTPFGAFGG LK  SATEL  +++KAAL  A +DPS V+ VY GNVIQSS DA YLARH+GLK GVP   PALTINRLCGSGFETVI G ++++L +AS+ +  G+ENMS AP  VDGN  RWGV LGKG  M+DSLW GLTD   GTPMGITAENL  +YGITRQ+CDEF +RSQ  W KA + G    E+  VE++TKKG  ++  DEHPRP   L +++ L PVFKKDG+VTAANASGI DGAG ++LA+E+ V  H L+PLAR+ ++   GCDPSIMGIGPV AI+GAL  +G+ LAD+DR+EINEAFAAQFLACAK L LDM KTN+HGGAI+ GHPL ASGSRI AHLAN       GK    +GSACIGGGQGIAV+L+ V
Sbjct:    4 IFIVAAKRTPFGAFGGSLKALSATELGAISTKAALSSANIDPSLVDAVYFGNVIQSSPDAAYLARHVGLKCGVPIPTPALTINRLCGSGFETVIQGAKSIKLNEASIVVCGGSENMSMAPLQVDGNDARWGVALGKGLTMRDSLWDGLTDKYVGTPMGITAENLAEQYGITRQDCDEFAIRSQQTWVKAHKNGVFDLEMANVEIETKKGPKIIGTDEHPRPDTSLEQIASLRPVFKKDGVVTAANASGICDGAGTIILASEEAVREHGLQPLARLASYHVSGCDPSIMGIGPVSAIKGALESAGMTLADVDRMEINEAFAAQFLACAKALELDMDKTNLHGGAISFGHPLGASGSRITAHLANEFLRTDAGK--VHVGSACIGGGQGIAVVLERV 396          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|299115734|emb|CBN74299.1| (Acetyl-CoA acetyltransferase, putative mitochondrial presursor [Ectocarpus siliculosus])

HSP 1 Score: 497.278 bits (1279), Expect = 8.329e-173
Identity = 248/401 (61.85%), Postives = 304/401 (75.81%), Query Frame = 0
Query:    8 ARKGLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKG--YVMGSACIGGGQGIAVLLQAV 406
            A  G+FIVGAKRT FG+FGG L   SAT+LA  +SKAAL  A + P  ++  + GNVIQ+S DACYL+RH+ LK G     PALT+NRLCGSGFETV+ G EA++LG+ASVAL AG ENMS+AP VV GN  RWGV LG G +M+DSLWAGLTDS AG PMG+TAENLG KYGITR++C+E+ + SQ  W+     GA   E+ P+EVKTKKG  ++  DEHPRP   + KM+ L PVFKKDG+VT+A ASGI DGAG+L+LA E  V+  +L PLARVVA   VGCDP+IMGIGPV AIRGAL  +G+ LAD+D +E+NEAFA Q+LA  KELGL+  KTN +GGAIALGHPL ASGSRI+AHL + L+     +KG  Y +G+ACIGGGQGIAV+++ V
Sbjct:    2 AASGVFIVGAKRTAFGSFGGSLSRLSATDLAVASSKAALVSAGIGPDLIDATFVGNVIQTSPDACYLSRHVALKVGARVETPALTVNRLCGSGFETVVQGAEAIQLGKASVALCAGAENMSSAPLVVAGNDARWGVALGSGLKMEDSLWAGLTDSYAGLPMGMTAENLGDKYGITREQCEEYSVLSQTRWSSGNANGAFTEEMAPIEVKTKKGPKVMDTDEHPRPS-SVEKMAALRPVFKKDGVVTSATASGICDGAGSLLLAGESAVNQKQLTPLARVVATHEVGCDPAIMGIGPVNAIRGALQKAGLTLADMDLVEVNEAFAVQYLAVEKELGLERGKTNTNGGAIALGHPLGASGSRIMAHLTHELR-----RKGLKYGVGAACIGGGQGIAVVIENV 396          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|1210522463|dbj|GAX18866.1| (acetyl-CoA acyltransferase 2 [Fistulifera solaris])

HSP 1 Score: 492.656 bits (1267), Expect = 4.889e-171
Identity = 237/394 (60.15%), Postives = 299/394 (75.89%), Query Frame = 0
Query:   11 GLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQ 404
            G+F+V AKRTPFGAFGG  KN SA +L   +++AAL    +DP+ V+ +Y GNVIQ+ +DA YL+RH+GLK+G+P   PALT+NRLCGSGFETV+   ++++LG++ V+LA G E+MS AP    G +VRWG  LG+G  + DSLW GLTD+ AGTPMG+TAENLG KY ITR ECDE+ +RSQ LW KA + G  QAE+ PV VK KK   LV  DEHPRP     K++KL  VF+KDG+V+AANASGI DGAG++++A+E+ V  H L PLAR+V++   GC+P+IMGIGPV AI+ ALS +G+ L D+DR+EINEAFAAQ LACAKEL LDM K N+HGGAI+LGHPL ASGSRI+AHL N   G       Y +G+ACIGGGQGIAVLL+
Sbjct:    3 GIFVVAAKRTPFGAFGGSFKNTSAVQLGVASTQAAL--QNIDPTIVDSIYFGNVIQTGDDAAYLSRHIGLKSGIPIATPALTLNRLCGSGFETVVQSFKSIQLGESHVSLAGGVESMSLAPLNASG-TVRWGTSLGQGISLTDSLWNGLTDAHAGTPMGVTAENLGKKYDITRAECDEYAIRSQQLWKKANDNGVFQAEMAPVSVKNKKKEVLVDTDEHPRPDSTFEKINKLPSVFQKDGVVSAANASGICDGAGSVIIASEEAVKQHNLTPLARIVSYGVTGCEPTIMGIGPVTAIQQALSKAGLTLRDMDRVEINEAFAAQVLACAKELDLDMDKFNIHGGAISLGHPLGASGSRIMAHLVNTWSGND----KYYIGAACIGGGQGIAVLLE 389          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|1210519958|dbj|GAX21209.1| (acetyl-CoA acyltransferase 2 [Fistulifera solaris])

HSP 1 Score: 484.952 bits (1247), Expect = 4.680e-168
Identity = 233/394 (59.14%), Postives = 296/394 (75.13%), Query Frame = 0
Query:   11 GLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQ 404
            G+F+V AKRTPFGAFGG  K  SA +L  +A++AAL    +DP+ V+ +Y GNVIQ+ +DA YL+RH+GLK+G+P   PALT+NRLCGSGFE+V+   ++++LG++ V+LA G E+MS AP    G +VRWG  LG+G  + DSLW GLTD+ AGTPMG+TAENLG KY ITR ECDE+ +RSQ LW KA + G  +AE+ PV VK KK    V  DEHPRP     K+SKL  VF+KDG+V+AANASGI DGAG++++A+E  V  H L P+AR+V++   GC+P+IMGIGPV AI+ AL  +G+ L D+DR+EINEAFAAQ LACAKEL LDM K N+HGGAI+LGHPL ASGSRI+AHL N   G       Y +G+ACIGGGQGIAVLL+
Sbjct:    3 GIFVVAAKRTPFGAFGGSFKQTSAVQLGVVATQAAL--QNIDPTIVDSIYFGNVIQTGDDAAYLSRHIGLKSGIPIATPALTLNRLCGSGFESVVQSYKSIQLGESHVSLAGGVESMSLAPLNASG-TVRWGTSLGQGISLTDSLWNGLTDAHAGTPMGVTAENLGKKYEITRAECDEYAIRSQQLWKKASDNGVFKAEMAPVSVKNKKKEAFVDTDEHPRPDSTFEKISKLPSVFQKDGVVSAANASGICDGAGSVIVASEQAVKQHNLTPIARIVSYGVTGCEPTIMGIGPVTAIQQALGKAGLTLGDMDRVEINEAFAAQVLACAKELDLDMDKFNIHGGAISLGHPLGASGSRIMAHLVNTWSGTD----KYYIGAACIGGGQGIAVLLE 389          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|219119079|ref|XP_002180306.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408563|gb|EEC48497.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 484.952 bits (1247), Expect = 7.969e-168
Identity = 245/397 (61.71%), Postives = 294/397 (74.06%), Query Frame = 0
Query:   12 LFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWG-VPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGID-LVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQAV 406
            ++IV AKRTPFGAFGG LK+ SAT+L   A+K AL    +DPS V+ VY GNVIQSS DA YLARH+GL+A  P   PALTINRLCGSGFETV+     + LG++ VA+A GTENMSAAP  +DGN  RWG V LG G ++ D+LW GLTDSLA TPMG TAENL  +Y I+R ECDE+ +RSQ  W  AQ+ G   AE+ P+E+  +KG   +V  DEHPR    L K++ L PVF K G+VTAANASGI DGAGA++LA+E  V  H L PL RVV++   GC+P++MGIGPVEAIR AL  + + LAD+DRIEINEAFAAQ LACAKELGLD  KTN+HGGAI+LGHPL ASGSRIVAHLA+        +  Y +GSACIGGGQGIAVL++ V
Sbjct:    9 VYIVAAKRTPFGAFGGALKSVSATDLGAHATKTALASGNVDPSLVDAVYFGNVIQSSPDAAYLARHVGLQAQCPIATPALTINRLCGSGFETVVQAANGIRLGESHVAVAGGTENMSAAPLTLDGNVARWGGVKLGHGMKLGDALWDGLTDSLAQTPMGQTAENLATQYNISRAECDEYAIRSQQTWGAAQQAGLFDAEMAPMELPGRKGTTTVVDTDEHPRVDTLLEKIASLRPVFSKTGVVTAANASGICDGAGAVILASEQAVLEHNLTPLCRVVSYGITGCEPTVMGIGPVEAIRQALHRANLKLADMDRIEINEAFAAQVLACAKELGLDWDKTNLHGGAISLGHPLGASGSRIVAHLAHEFATNSAAQ--YHIGSACIGGGQGIAVLMERV 403          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|1121953726|ref|XP_019488601.1| (PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial isoform X2 [Hipposideros armiger])

HSP 1 Score: 479.174 bits (1232), Expect = 1.121e-165
Identity = 229/395 (57.97%), Postives = 297/395 (75.19%), Query Frame = 0
Query:   10 KGLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQ 404
            +G+FIV AKRTPFG +GG LK+F+ T+LA  A++AAL   K+ P  ++ V  GNV+Q+S+DA YLARH+GL+ GVP+  PALTINRLCGSGF++++ GC+ + +  A V L  GTENMS AP+ V   ++R+G  LG   +M+D+LW+ LTD     PM ITAENL  K+ I+R++CD++ L+SQ  W  A + G    E+VP+EVKT+KG   V VDEHPRPQ  + ++SKL PVFKKDG VTA NASGI DGAGA+++A+ED V  H  +PLARVV +   GCDPSIMGIGPV AI GAL  +G++L D+D +E+NEAFA Q+LA  K LGLD SKTNV+GGAIALGHPLA SGSRI AHL + L+ ++GGK  Y +GSACIGGGQGIAV+++
Sbjct:    5 RGVFIVAAKRTPFGTYGGLLKDFTTTDLAEFAARAALSAGKVSPEVIDSVIVGNVLQTSSDAVYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNGCQDICVKDAEVVLCGGTENMSQAPYCV--RNIRFGTKLGSDIKMEDTLWSSLTDQHVKLPMAITAENLAEKHKISREDCDKYALQSQQRWKAASDAGYFNNEMVPIEVKTRKGKQTVQVDEHPRPQTTMEQLSKLAPVFKKDGTVTAGNASGICDGAGAVIIASEDAVKKHNFKPLARVVGYFVSGCDPSIMGIGPVSAINGALKKTGLSLKDMDLVEVNEAFAPQYLAVEKSLGLDPSKTNVNGGAIALGHPLAGSGSRITAHLVHELR-RRGGK--YAVGSACIGGGQGIAVIIE 394          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|1121953723|ref|XP_019488600.1| (PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial isoform X1 [Hipposideros armiger])

HSP 1 Score: 478.789 bits (1231), Expect = 2.835e-165
Identity = 229/394 (58.12%), Postives = 296/394 (75.13%), Query Frame = 0
Query:   11 GLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQ 404
            G+FIV AKRTPFG +GG LK+F+ T+LA  A++AAL   K+ P  ++ V  GNV+Q+S+DA YLARH+GL+ GVP+  PALTINRLCGSGF++++ GC+ + +  A V L  GTENMS AP+ V   ++R+G  LG   +M+D+LW+ LTD     PM ITAENL  K+ I+R++CD++ L+SQ  W  A + G    E+VP+EVKT+KG   V VDEHPRPQ  + ++SKL PVFKKDG VTA NASGI DGAGA+++A+ED V  H  +PLARVV +   GCDPSIMGIGPV AI GAL  +G++L D+D +E+NEAFA Q+LA  K LGLD SKTNV+GGAIALGHPLA SGSRI AHL + L+ ++GGK  Y +GSACIGGGQGIAV+++
Sbjct:   15 GVFIVAAKRTPFGTYGGLLKDFTTTDLAEFAARAALSAGKVSPEVIDSVIVGNVLQTSSDAVYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNGCQDICVKDAEVVLCGGTENMSQAPYCV--RNIRFGTKLGSDIKMEDTLWSSLTDQHVKLPMAITAENLAEKHKISREDCDKYALQSQQRWKAASDAGYFNNEMVPIEVKTRKGKQTVQVDEHPRPQTTMEQLSKLAPVFKKDGTVTAGNASGICDGAGAVIIASEDAVKKHNFKPLARVVGYFVSGCDPSIMGIGPVSAINGALKKTGLSLKDMDLVEVNEAFAPQYLAVEKSLGLDPSKTNVNGGAIALGHPLAGSGSRITAHLVHELR-RRGGK--YAVGSACIGGGQGIAVIIE 403          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|395822933|ref|XP_003784757.1| (PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial [Otolemur garnettii])

HSP 1 Score: 477.633 bits (1228), Expect = 4.954e-165
Identity = 234/397 (58.94%), Postives = 295/397 (74.31%), Query Frame = 0
Query:   10 KGLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQAV 406
            +G+FIV AKRTPFGA+GG LK+F+AT+LA  A+KAAL   K+ P  V+ V  GNV Q+S+DA YLARH+GL+ GVP+  PALT+NRLCGSGF++++ GC+ + +  A V L  GTENMS AP+ V   + R+G  LG   +++DSLW  LTD     PM ITAENL AK+ I+R+ECD++ L+SQ  W  A + G    E+VP+EVKTKKG   V VDEH RPQ  L ++ KL PVFKKDG VTA NASGI+DGAGA+VLA+ED V  H   PLAR+V +   GCDPSIMGIGPV AI GAL  +G++L D+D +E+NEAFA Q+LA  K LGLD SKTNV+GGAIALGHPL  SG+RI AHL + L+ ++GGK  Y +GSACIGGGQGIAV++Q+ 
Sbjct:    5 RGVFIVAAKRTPFGAYGGLLKDFTATDLAEFAAKAALSAGKVSPETVDSVIVGNVAQTSSDAIYLARHVGLRVGVPKETPALTVNRLCGSGFQSIVNGCQDICVKDAEVVLCGGTENMSQAPYCV--RNTRFGTKLGSDLKLEDSLWVALTDQHVKLPMAITAENLAAKHKISREECDKYALQSQQRWKAANDAGYFNEEMVPIEVKTKKGNQTVQVDEHARPQTTLEQLQKLPPVFKKDGTVTAGNASGISDGAGAVVLASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKTGLSLKDMDLVEVNEAFAPQYLAVEKSLGLDPSKTNVNGGAIALGHPLGGSGTRITAHLVHELR-RRGGK--YAVGSACIGGGQGIAVIIQST 396          
BLAST of EWM29392.1 vs. NCBI_GenBank
Match: gi|507647128|ref|XP_004703039.1| (PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial [Echinops telfairi])

HSP 1 Score: 476.863 bits (1226), Expect = 9.439e-165
Identity = 233/395 (58.99%), Postives = 298/395 (75.44%), Query Frame = 0
Query:   10 KGLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQ 404
            +G+FIV AKRT FGA+GG LK+F+AT+L   A+KAAL    + P  V+ V  GNV+QSS+DA YLARH+GL+ GVP+ VPALTINRLCGSGF+++I GC+ + +  A V L  GTE+MS AP+ V   +VR+G   G   +M+DSLWAGLTD     PMGITAENL AK+ I+R++CD + L+SQ  W  A + G   AE+ P+EVKTKKG   + VDEHPRPQ  L ++SKL PVFKK+G VTA NASG++DGAGA+V+A+ED V  H   PLARVV +   GCDP+IMGIGPV AI GAL  +G++L D+D +E+NEAFA Q+LA  K LGLD SK+NV+GGAIALGHPL  SGSRI++HL + L+ ++GGK  Y +GSACIGGGQGIAV+++
Sbjct:    5 RGVFIVAAKRTAFGAYGGLLKDFTATDLTEFAAKAALSAGNIPPETVDSVIVGNVMQSSSDAAYLARHVGLRVGVPKEVPALTINRLCGSGFQSIINGCQEIGVKDADVVLCGGTESMSQAPYCV--RNVRFGTKFGSDLKMEDSLWAGLTDQHVQLPMGITAENLAAKHSISREQCDRYALQSQQRWKAANDAGCFTAEMAPIEVKTKKGKQTMQVDEHPRPQATLEQLSKLPPVFKKEGTVTAGNASGVSDGAGAVVIASEDAVKKHSFTPLARVVGYFVSGCDPAIMGIGPVPAISGALKRTGLSLKDMDLVEVNEAFAPQYLAVEKSLGLDPSKSNVNGGAIALGHPLGGSGSRIISHLVHELR-RRGGK--YAVGSACIGGGQGIAVIIE 394          
The following BLAST results are available for this feature:
BLAST of EWM29392.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553184575|ref|XP_005854113.1|0.000e+0100.00beta-ketoacyl-CoA thiolase [Nannochloropsis gadita... [more]
gi|224003771|ref|XP_002291557.1|0.000e+064.813-ketoacyl-coa thiolase, mitochondrial [Thalassios... [more]
gi|299115734|emb|CBN74299.1|8.329e-17361.85Acetyl-CoA acetyltransferase, putative mitochondri... [more]
gi|1210522463|dbj|GAX18866.1|4.889e-17160.15acetyl-CoA acyltransferase 2 [Fistulifera solaris][more]
gi|1210519958|dbj|GAX21209.1|4.680e-16859.14acetyl-CoA acyltransferase 2 [Fistulifera solaris][more]
gi|219119079|ref|XP_002180306.1|7.969e-16861.71predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1121953726|ref|XP_019488601.1|1.121e-16557.97PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial ... [more]
gi|1121953723|ref|XP_019488600.1|2.835e-16558.12PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial ... [more]
gi|395822933|ref|XP_003784757.1|4.954e-16558.94PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial ... [more]
gi|507647128|ref|XP_004703039.1|9.439e-16558.99PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1282rna1282Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications