EWM29407.1, cds1279 (CDS) Nannochloropsis gaditana

Overview
NameEWM29407.1
Unique Namecds1279
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:231877..231951 +
Alignment locationCM002457.1:232205..232948 +

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Properties
Property NameValue
Protein idEWM29407.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100042g9.5654.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:231877..231951 +
CM002457.1supercontigCM002457.1:232205..232948 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29407.1 vs. NCBI_GenBank
Match: gi|585111936|gb|EWM29407.1| (hypothetical protein Naga_100042g9 [Nannochloropsis gaditana])

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 
Query:    1 MRTRRFSGLVFVGVMSGFLLDCRVRGFVPATPILPSSAQVCRHWNSVTPRPGALPPYDAPYSQPEEEKNFWGNDYVPKQRHPGTMPPGTRLEDKPIEELSPVSNIPYPHFQEWPFHYRFPAYQPRRLDFIEWMTQRGLMVEDDGDTRGVRFLGRKRRFRAQKAQADKAAAEGSDPMTPDERKQAMEGIDGDYWRSEGAELIEPEPYLFEMAKHKRERVPYIVTVREAKAAKLAAEAAAGGGEVIPGTGKGGGGVEKTAKGGKKAKQPPSAEI 272
            MRTRRFSGLVFVGVMSGFLLDCRVRGFVPATPILPSSAQVCRHWNSVTPRPGALPPYDAPYSQPEEEKNFWGNDYVPKQRHPGTMPPGTRLEDKPIEELSPVSNIPYPHFQEWPFHYRFPAYQPRRLDFIEWMTQRGLMVEDDGDTRGVRFLGRKRRFRAQKAQADKAAAEGSDPMTPDERKQAMEGIDGDYWRSEGAELIEPEPYLFEMAKHKRERVPYIVTVREAKAAKLAAEAAAGGGEVIPGTGKGGGGVEKTAKGGKKAKQPPSAEI
Sbjct:    1 MRTRRFSGLVFVGVMSGFLLDCRVRGFVPATPILPSSAQVCRHWNSVTPRPGALPPYDAPYSQPEEEKNFWGNDYVPKQRHPGTMPPGTRLEDKPIEELSPVSNIPYPHFQEWPFHYRFPAYQPRRLDFIEWMTQRGLMVEDDGDTRGVRFLGRKRRFRAQKAQADKAAAEGSDPMTPDERKQAMEGIDGDYWRSEGAELIEPEPYLFEMAKHKRERVPYIVTVREAKAAKLAAEAAAGGGEVIPGTGKGGGGVEKTAKGGKKAKQPPSAEI 272
The following BLAST results are available for this feature:
BLAST of EWM29407.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111936|gb|EWM29407.1|0.000e+0100.00hypothetical protein Naga_100042g9 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1281rna1281Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications