EWM29401.1, cds1263 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|585111930|gb|EWM29401.1| (trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 954.51 bits (2466), Expect = 0.000e+0 Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0
Query: 1 MAGTFIRNRLLPRVAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHPGMLRVDFDVPQRGVALSQTLALYAGERCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSGGKRCVAEARGGEESPRA 463
MAGTFIRNRLLPRVAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHPGMLRVDFDVPQRGVALSQTLALYAGERCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSGGKRCVAEARGGEESPRA
Sbjct: 1 MAGTFIRNRLLPRVAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHPGMLRVDFDVPQRGVALSQTLALYAGERCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSGGKRCVAEARGGEESPRA 463
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|698790382|ref|XP_009828223.1| (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Aphanomyces astaci] >gi|574117071|gb|ETV82554.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Aphanomyces astaci]) HSP 1 Score: 372.859 bits (956), Expect = 4.125e-122 Identity = 207/454 (45.59%), Postives = 258/454 (56.83%), Query Frame = 0
Query: 13 RVAVGLSGGVDSSVAALLL-LEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMG---KKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSD------HPG-----------MLRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTWAV 444
+V VG+SGGVDSSVAA LL ++ EV G++M NWDT+DE G + CP + V +GIP RVDF + YW +VF P L+EY +G TPNPD+LCNREIKFD F A+ +VG IATGHYA+L P + A + + S L +D KDQ+YFLS V AFQ VLFPLG K QVR++A A L TA KESMGICF+GKR G+FL +Y+ PR G FVSV T + +G + T+GQGA++ G KWFV GK + + VAPGT HPAL+ D V + FNW+ P+ G D +P PS S + +FRC YRARYRQPLAGC V+ D HP L+VDFDVPQRG+A Q++ LY + C GGGAI GPSY+ K LP W V
Sbjct: 30 KVVVGMSGGVDSSVAAYLLHQDKSLEVHGMYMNNWDTSDEEGHATCPADMEYEAVRQVCNDIGIPCTRVDFVQEYWNNVFAPCLDEYAQGFTPNPDVLCNREIKFDAFARHAKHLVGADAIATGHYAQLL----------------------PMHDSAASSTDSDALRLFAAVDTNKDQTYFLSHVSAAAFQQVLFPLGKFTKPQVREIALHANLSTALAKESMGICFIGKRPFGSFLAQYVPPRQGHFVSVETNATMHAHDG-FSAYTIGQGAKVPGQAAKWFVVGKRDQDAAVLVAPGTHHPALFADHTYVHTQAFNWLAPPPFSQGLIQSSVRDDGKPATPPPSHTSATTSFRCLYRARYRQPLAGCTVTIVHDLDATGLHPARHNHQQLSTDTYLKVDFDVPQRGLAPGQSVVLYRQDGLCFGGGAIYCAGPSYWEMRKPLPSPLHDWHV 460
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|673026708|ref|XP_008867315.1| (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Aphanomyces invadans] >gi|574477362|gb|ETW04359.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Aphanomyces invadans]) HSP 1 Score: 355.91 bits (912), Expect = 1.215e-115 Identity = 202/449 (44.99%), Postives = 252/449 (56.12%), Query Frame = 0
Query: 13 RVAVGLSGGVDSSVAALLL-LEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPS--TASPSVAFRCEYRARYRQPLAGCQVSTSSD------HP---------GMLRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTW 442
+V VG+SGGVDSSVAA LL ++ EV G++M NWD +DE G + CP + V + +GI RVDF + YW +VF P L+EY +G TPNPD+LCNREIKFD F A+D +G +IATGHYA+L P+PSS P N G L D KDQ+YFLS V AFQ V FPLG K QVR +A AA L TA KESMGICF+GKR G FL +Y+ PR G FVSV + V+ +G + T+GQGA++ G KWFV GK E + +APGT HPAL+ D V FNW+ P ++PS + + FRC YRARYRQPLA C V+ + D HP L+V+FD+PQRG+A Q+L LY + C GGGAI GPSY+ K LP W
Sbjct: 28 KVVVGMSGGVDSSVAAYLLHQDKSLEVHGLYMNNWDCSDEEGQATCPADMEYESVRQVCRDIGISCSRVDFVQTYWNNVFAPCLDEYAQGFTPNPDVLCNREIKFDAFANHAKD-IGADFIATGHYAQLL------------PIPSSALPDSPSNGNGVLG-------LFAAADSNKDQTYFLSHVSLAAFQKVRFPLGAHTKPQVRQIASAAKLSTALAKESMGICFIGKRPFGTFLAQYVPPRKGHFVSVESNAVMHEHDG-FSSYTIGQGAKVSGQSIKWFVVGKRDEDAAVLIAPGTHHPALFADHTYVDASAFNWL---------------VPPHQIPSGFADNGTTTFRCFYRARYRQPLAACTVTIAHDLDATSLHPMRQTLPTSSTFLKVEFDIPQRGLAPGQSLVLYRDDGLCFGGGAIYCAGPSYWEMQKPLPSPLYDW 440
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|669146546|ref|XP_008608835.1| (tRNA methyl transferase [Saprolegnia diclina VS20] >gi|530739660|gb|EQC37902.1| tRNA methyl transferase [Saprolegnia diclina VS20]) HSP 1 Score: 346.28 bits (887), Expect = 4.988e-112 Identity = 197/453 (43.49%), Postives = 257/453 (56.73%), Query Frame = 0
Query: 14 VAVGLSGGVDSSVAALLL-LEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWI-GQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSS-------------------DHPGMLRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTWAV 444
V VG+SGGVDSSV A LL ++ V+G++M NWD++DE G + CP D V ++GI RVDF + YW +VF P L++Y KGLTPNPD+LCNREIKFD F A +G +IATGHYA+L+ P G+++ L +D KDQSYFLS V FQ V+FPLG L K +VR++A A LCTA KK+S+GICF+GKR G+FL +Y+ PR G+FVSV + + +G + T+GQGA++ G KWFV GK E +++APGT HPAL+ D + V FNWI G A P+ + + RC+YRARYRQPLA C +S +S D P LRV FDVPQRGVA +Q+L LY + C GGG I+ GPSY+ Q K LP W++
Sbjct: 27 VVVGMSGGVDSSVTAYLLHQDKSLHVVGLYMNNWDSSDEEGKATCPADMDYELVRQVCDEIGIECARVDFVQEYWNNVFEPCLDQYAKGLTPNPDVLCNREIKFDVFAKHAL-ALGADYIATGHYAQLKRLPD--------------------------GTNA----LYAAVDGNKDQSYFLSHVTGAQFQRVMFPLGGLCKPRVREIAAEANLCTAAKKDSVGICFIGKRSFGSFLSQYVPPRTGSFVSVVDEQQMHAHDG-YSAYTIGQGAKVSGLPAKWFVVGKRDEDAAVFIAPGTHHPALFSDEVFVRASAFNWIQGHA------------------PAALTNDGSLRCQYRARYRQPLAHCTISMASMDDVTSGLSVYQPTAIAPADEP-YLRVQFDVPQRGVAPAQSLVLYEDDGLCYGGGPILGAGPSYWEQQKPLPSPLFDWSM 428
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|568034006|gb|ETM31693.1| (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica]) HSP 1 Score: 345.895 bits (886), Expect = 1.756e-111 Identity = 200/461 (43.38%), Postives = 245/461 (53.15%), Query Frame = 0
Query: 14 VAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHP---------------------------GMLRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSG 446
V VG+SGGVDSSVAALLL QGY V GV+M+NWD +DE G SACP + D + V +QLGI V+ + YW VF P LE Y++GLTPNPDILCNREIKF F +A+ + G ++ATGHYA LR P+ GP P LC D+ KDQSYFLS V RAF +VLFPLG +RK +VR +A GLCTA KK+S+GICF+GKR F+ +Y+Q + G F +V GE + + G T TVGQGAR+ G KWFV GK + VA GT +PAL+ D L + +FNW+ LP + RC YR RYRQ L C +S S+H LRVDFD PQRGV Q L LY + C GGG I G +YY QGK L + W G
Sbjct: 55 VVVGMSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYMDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKKI-GADYVATGHYAALR------PAHGCGP-----------------------PNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKRNFADFIHQYIQRQEGYFYTVD-GEKMHSHLG-FTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGV-----------------LPQELRDTGCMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLADDVHDWHRQG 466
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|970645519|gb|KUF85965.1| (hypothetical protein AM588_10002392 [Phytophthora nicotianae]) HSP 1 Score: 345.895 bits (886), Expect = 2.180e-111 Identity = 200/461 (43.38%), Postives = 245/461 (53.15%), Query Frame = 0
Query: 14 VAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHP---------------------------GMLRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSG 446
V VG+SGGVDSSVAALLL QGY V GV+M+NWD +DE G SACP + D + V +QLGI V+ + YW VF P LE Y++GLTPNPDILCNREIKF F +A+ + G ++ATGHYA LR P+ GP P LC D+ KDQSYFLS V RAF +VLFPLG +RK +VR +A GLCTA KK+S+GICF+GKR F+ +Y+Q + G F +V GE + + G T TVGQGAR+ G KWFV GK + VA GT +PAL+ D L + +FNW+ LP + RC YR RYRQ L C +S S+H LRVDFD PQRGV Q L LY + C GGG I G +YY QGK L + W G
Sbjct: 55 VVVGMSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKKI-GADYVATGHYAALR------PAHGCGP-----------------------PNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKRNFADFIHQYIQRQEGYFYTVD-GEKMHSHLG-FTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGV-----------------LPQELRDTGCMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLADDVHDWHRQG 466
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|567945964|gb|ETK71775.1| (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica] >gi|568004089|gb|ETL78424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica] >gi|570312140|gb|ETO60088.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica P1976]) HSP 1 Score: 345.895 bits (886), Expect = 2.252e-111 Identity = 200/461 (43.38%), Postives = 245/461 (53.15%), Query Frame = 0
Query: 14 VAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHP---------------------------GMLRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSG 446
V VG+SGGVDSSVAALLL QGY V GV+M+NWD +DE G SACP + D + V +QLGI V+ + YW VF P LE Y++GLTPNPDILCNREIKF F +A+ + G ++ATGHYA LR P+ GP P LC D+ KDQSYFLS V RAF +VLFPLG +RK +VR +A GLCTA KK+S+GICF+GKR F+ +Y+Q + G F +V GE + + G T TVGQGAR+ G KWFV GK + VA GT +PAL+ D L + +FNW+ LP + RC YR RYRQ L C +S S+H LRVDFD PQRGV Q L LY + C GGG I G +YY QGK L + W G
Sbjct: 55 VVVGMSGGVDSSVAALLLKRQGYRVTGVYMKNWDPSDEEGESACPVDSEYMDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKKI-GADYVATGHYAALR------PAHGCGP-----------------------PNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKRNFADFIHQYIQRQEGYFYTVD-GEKMHSHLG-FTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGV-----------------LPQELRDTGCMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLADDVHDWHRQG 466
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|566008477|gb|ETI31388.1| (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica P1569] >gi|567974617|gb|ETL25206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica] >gi|570935918|gb|ETP01175.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 345.51 bits (885), Expect = 2.403e-111 Identity = 200/461 (43.38%), Postives = 245/461 (53.15%), Query Frame = 0
Query: 14 VAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHP---------------------------GMLRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSG 446
V VG+SGGVDSSVAALLL QGY V GV+M+NWD +DE G SACP + D + V +QLGI V+ + YW VF P LE Y++GLTPNPDILCNREIKF F +A+ + G ++ATGHYA LR P+ GP P LC D+ KDQSYFLS V RAF +VLFPLG +RK +VR +A GLCTA KK+S+GICF+GKR F+ +Y+Q + G F +V GE + + G T TVGQGAR+ G KWFV GK + VA GT +PAL+ D L + +FNW+ LP + RC YR RYRQ L C +S S+H LRVDFD PQRGV Q L LY + C GGG I G +YY QGK L + W G
Sbjct: 55 VVVGMSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKKI-GADYVATGHYAALR------PAHGCGP-----------------------PNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKRNFADFIHQYIQRQEGYFYTVD-GEKMHSHLG-FTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGV-----------------LPQELRDTGCMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLADDVHDWHRQG 466
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|675179247|ref|XP_008898508.1| (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica INRA-310] >gi|568101465|gb|ETN16151.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica INRA-310] >gi|970633057|gb|KUF78938.1| tRNA-specific 2-thiouridylase MnmA [Phytophthora nicotianae]) HSP 1 Score: 344.354 bits (882), Expect = 7.729e-111 Identity = 199/461 (43.17%), Postives = 245/461 (53.15%), Query Frame = 0
Query: 14 VAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWIGQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHP---------------------------GMLRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSG 446
V VG+SGGVDSSVAALLL QGY V GV+M+NWD +DE G SACP + D + V +QLGI V+ + YW VF P LE Y++GLTPNPDILCNREIKF F +A+ + G ++ATGHYA LR P+ GP P LC D+ KDQSYFLS V RAF +VLFPLG +RK +VR +A GLCTA KK+S+GICF+GKR F+ +Y++ + G F +V GE + + G T TVGQGAR+ G KWFV GK + VA GT +PAL+ D L + +FNW+ LP + RC YR RYRQ L C +S S+H LRVDFD PQRGV Q L LY + C GGG I G +YY QGK L + W G
Sbjct: 55 VVVGMSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKKI-GADYVATGHYAALR------PAHGCGP-----------------------PNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKRNFADFIHQYIERQEGYFYTVD-GEKMHSHLG-FTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGV-----------------LPQELRDTGCMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLADDVHDWHRQG 466
BLAST of EWM29401.1 vs. NCBI_GenBank
Match: gi|953502975|emb|CEG35743.1| (trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Plasmopara halstedii]) HSP 1 Score: 343.584 bits (880), Expect = 1.245e-110 Identity = 205/463 (44.28%), Postives = 249/463 (53.78%), Query Frame = 0
Query: 14 VAVGLSGGVDSSVAALLLLEQGYEVIGVHMQNWDTTDEAGASACPYTEDLRDAEAVSKQLGIPFHRVDFCRPYWTHVFTPFLEEYDKGLTPNPDILCNREIKFDRFQGFARDVVGTPWIATGHYARLRHFPSLGPSLPVGPLPSSTSEGGPRNPRACTGSHSSLPELCTGMDEAKDQSYFLSQVPTRAFQHVLFPLGHLRKGQVRDMAHAAGLCTAEKKESMGICFVGKRRMGAFLPEYLQPRAGTFVSVTTGEVLGTQEGALTLLTVGQGARIGGAEEKWFVCGKDMEAGRIYVAPGTDHPALYCDWLLVAKEDFNWI-GQAPWEMGKKHEDRSQPTDRLPSTASPSVAFRCEYRARYRQPLAGCQVSTSSDHPGM----------------------------LRVDFDVPQRGVALSQTLALYAGE-RCLGGGAIVEVGPSYYAQGKRLPERRLTWAVSG 446
V VG+SGGVDSSVAALLL QGY V GV+M+NWD++DE G SACP + RD + V +QLGI V+ + YW VF P L+ Y++GLTPNPDILCNREIKF F +A+ +G ++ATGHYA LR PV GG LP+L D KDQSYFLS V +AF+ VLFPLG +RK QVR +A + GLCTA KK+S+GICF+GKR F+ +Y+Q + G F ++ G L G T TVGQGAR+ G KWFV GK I++A GT +PALY D L + FNWI G P + Q RL RC YR RYRQ L C VS S H + LRVDFD PQRGV Q+L LY + C GGG I G +YY Q + LP W G
Sbjct: 46 VVVGMSGGVDSSVAALLLKRQGYHVTGVYMKNWDSSDEDGVSACPVDLEYRDVQKVCEQLGIEAQMVNMVQSYWNQVFAPCLKGYEEGLTPNPDILCNREIKFKAFTEYAKR-IGADYVATGHYAALR---------PV-------ELGG-------------LPQLFAAEDSTKDQSYFLSNVDGKAFEKVLFPLGGMRKTQVRQIAESEGLCTASKKDSVGICFIGKRNFPDFIHQYIQRQEGYFHAI-NGTKLYPHRG-FTAYTVGQGARLHGMSAKWFVVGKRKSDYSIFIAQGTRNPALYSDTLYASAAQFNWIAGDLPHDF--------QHIGRL----------RCYYRVRYRQDLDACTVSFVSSHDALLNASKFHDWQPELVDDDNLDGKEMTRTYLRVDFDHPQRGVTPDQSLVLYRSDGLCFGGGPIAAAGKTYYEQDRLLPNDAPDWRSQG 458 The following BLAST results are available for this feature:
BLAST of EWM29401.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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